RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PSMG4Q5JS54 123 aa8.79□□□□□ -1
HPS4-214ENST00000485842 LINC00305Q7Z4B0 112 aa8.79□□□□□ -1
HPS4-214ENST00000485842 SCGB1C1Q8TD33 95 aa8.79□□□□□ -1
HPS4-214ENST00000485842 GPR82Q96P67 336 aa8.79□□□□□ -1
HPS4-214ENST00000485842 RSG1Q9BU20 258 aa8.79□□□□□ -1
HPS4-214ENST00000485842 WFDC1Q9HC57 220 aa8.79□□□□□ -1
HPS4-214ENST00000485842 TGP01266 2768 aa8.79□□□□□ -1
HPS4-214ENST00000485842 ELOA3CA0A087WX78 387 aaPredicted RBP8.78□□□□□ -1
HPS4-214ENST00000485842 LOC102724200A0A096LPH7 203 aaPredicted RBP8.78□□□□□ -1
HPS4-214ENST00000485842 C17orf112F2Z3M2 114 aa8.78□□□□□ -1
HPS4-214ENST00000485842 RPL35AP18077 110 aaKnown RBP8.78□□□□□ -1
HPS4-214ENST00000485842 RPL7P18124 248 aaKnown RBP8.78□□□□□ -1
HPS4-214ENST00000485842 ATF4P18848 351 aaPredicted RBP8.78□□□□□ -1
HPS4-214ENST00000485842 SNRPD3P62318 126 aaKnown RBP8.78□□□□□ -1
HPS4-214ENST00000485842 INO80EQ8NBZ0 244 aaPredicted RBP8.78□□□□□ -1
HPS4-214ENST00000485842 OR1L4Q8NGR5 311 aa8.78□□□□□ -1
HPS4-214ENST00000485842 TMEM37Q8WXS4 190 aa8.78□□□□□ -1
HPS4-214ENST00000485842 AQP10Q96PS8 301 aa8.78□□□□□ -1
HPS4-214ENST00000485842 PFDN5Q99471 154 aa8.78□□□□□ -1
HPS4-214ENST00000485842 DNAJC4Q9NNZ3 241 aa8.78□□□□□ -1
HPS4-214ENST00000485842 KCNIP2Q9NS61 270 aa8.78□□□□□ -1
HPS4-214ENST00000485842 G3V3Q6 166 aa8.77□□□□□ -1.01
HPS4-214ENST00000485842 NHLRC4P0CG21 123 aaPredicted RBP8.77□□□□□ -1.01
HPS4-214ENST00000485842 ID1P41134 155 aa8.77□□□□□ -1.01
HPS4-214ENST00000485842 GCSAMLQ5JQS6 135 aa8.77□□□□□ -1.01
HPS4-214ENST00000485842 MORN5Q5VZ52 161 aa8.77□□□□□ -1.01
HPS4-214ENST00000485842 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.77□□□□□ -1.01
HPS4-214ENST00000485842 LINC00322Q6ZN03 302 aaPredicted RBP8.77□□□□□ -1.01
HPS4-214ENST00000485842 Q6ZNX1 250 aa8.77□□□□□ -1.01
HPS4-214ENST00000485842 LINC00052Q96N35 136 aa8.77□□□□□ -1.01
HPS4-214ENST00000485842 TNFSF18Q9UNG2 199 aa8.77□□□□□ -1.01
HPS4-214ENST00000485842 hCG_2014768A0A024R1R8 64 aa8.76□□□□□ -1.01
HPS4-214ENST00000485842 RNF222A6NCQ9 220 aa8.76□□□□□ -1.01
HPS4-214ENST00000485842 KNCNA6PVL3 124 aa8.76□□□□□ -1.01
HPS4-214ENST00000485842 ARPC5O15511 151 aa8.76□□□□□ -1.01
HPS4-214ENST00000485842 MEOX2P50222 304 aa8.76□□□□□ -1.01
HPS4-214ENST00000485842 FFAR4Q5NUL3 377 aa8.76□□□□□ -1.01
HPS4-214ENST00000485842 C16orf92Q96LL3 132 aa8.76□□□□□ -1.01
HPS4-214ENST00000485842 ZMAT4Q9H898 229 aa8.76□□□□□ -1.01
HPS4-214ENST00000485842 RETNQ9HD89 108 aa8.76□□□□□ -1.01
HPS4-214ENST00000485842 RNF24Q9Y225 148 aa8.76□□□□□ -1.01
HPS4-214ENST00000485842 TRAV5A0A0B4J249 113 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 ISLRO14498 428 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 SOCS3O14543 225 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 SNRPCP09234 159 aaKnown RBP8.75□□□□□ -1.01
HPS4-214ENST00000485842 PSMB3P49720 205 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 APOC4P55056 127 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 ACTL10Q5JWF8 245 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 BPIFA4PQ86YQ2 179 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 STHQ8IWL8 128 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 HSD17B11Q8NBQ5 300 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 GATAD1Q8WUU5 269 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 C17orf77Q96MU5 243 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 SPATA25Q9BR10 227 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 TM2D3Q9BRN9 247 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 PARD6GQ9BYG4 376 aaPredicted RBP8.75□□□□□ -1.01
HPS4-214ENST00000485842 SEPSECSQ9HD40 501 aaKnown RBP8.75□□□□□ -1.01
HPS4-214ENST00000485842 RFNGQ9Y644 331 aa8.75□□□□□ -1.01
HPS4-214ENST00000485842 H3BTX0 84 aa8.74□□□□□ -1.01
HPS4-214ENST00000485842 MRPS12O15235 138 aaKnown RBP8.74□□□□□ -1.01
HPS4-214ENST00000485842 DEFB1P60022 68 aa8.74□□□□□ -1.01
HPS4-214ENST00000485842 ZNF266Q14584 549 aa8.74□□□□□ -1.01
HPS4-214ENST00000485842 FAM78BQ5VT40 261 aa8.74□□□□□ -1.01
HPS4-214ENST00000485842 SAMD13Q5VXD3 122 aa8.74□□□□□ -1.01
HPS4-214ENST00000485842 SPATA31B1PQ5VZV4 182 aa8.74□□□□□ -1.01
HPS4-214ENST00000485842 LRRC20Q8TCA0 184 aa8.74□□□□□ -1.01
HPS4-214ENST00000485842 RCHY1Q96PM5 261 aa8.74□□□□□ -1.01
HPS4-214ENST00000485842 U3KQK5 164 aa8.74□□□□□ -1.01
HPS4-214ENST00000485842 AGRNO00468 2067 aa8.74□□□□□ -1.01
HPS4-214ENST00000485842 A0A087X0K7 114 aa8.73□□□□□ -1.01
HPS4-214ENST00000485842 IGFL4Q6B9Z1 124 aa8.73□□□□□ -1.01
HPS4-214ENST00000485842 MIR17HGQ75NE6 70 aa8.73□□□□□ -1.01
HPS4-214ENST00000485842 RNF182Q8N6D2 247 aa8.73□□□□□ -1.01
HPS4-214ENST00000485842 C20orf173Q96LM9 149 aa8.73□□□□□ -1.01
HPS4-214ENST00000485842 MFFQ9GZY8 342 aa8.73□□□□□ -1.01
HPS4-214ENST00000485842 COL7A1Q02388 2944 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 BORCS7-ASMTA0A0B4J1R7 106 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 TRAV8-2A0A0B4J237 113 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 KIR2DL5BA0A0G2JN68 375 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 KIR2DL5BA0A0G2JPC4 375 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 ATP6V0CP27449 155 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 DEFB135Q30KP9 77 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 RPL7L1Q6DKI1 246 aaKnown RBP8.72□□□□□ -1.01
HPS4-214ENST00000485842 LCN15Q6UWW0 184 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 TRPT1Q86TN4 253 aaKnown RBP8.72□□□□□ -1.01
HPS4-214ENST00000485842 KIR2DL5AQ8N109 375 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 ZNF738Q8NE65 137 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 KIR2DL5BQ8NHK3 375 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 MRPL32Q9BYC8 188 aaKnown RBP8.72□□□□□ -1.01
HPS4-214ENST00000485842 RPRMQ9NS64 109 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 TIMM9Q9Y5J7 89 aa8.72□□□□□ -1.01
HPS4-214ENST00000485842 F6UB75 175 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 H3BQ15 152 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 SLC17A3O00476 420 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 CA1P00915 261 aaPredicted RBP8.71□□□□□ -1.02
HPS4-214ENST00000485842 IGKV3-20P01619 116 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 IGLC2P0DOY2 106 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 PYYP10082 97 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 HLA-DRB4P13762 266 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 HLA-DMBP28068 263 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms