RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 ATG101Q9BSB4 218 aa9.74□□□□□ -0.85
SMARCD3-211ENST00000485592 MAGT1Q9H0U3 335 aa9.74□□□□□ -0.85
SMARCD3-211ENST00000485592 RBKSQ9H477 322 aa9.74□□□□□ -0.85
SMARCD3-211ENST00000485592 U3KQ87 197 aa9.74□□□□□ -0.85
SMARCD3-211ENST00000485592 PIGBOS1A0A0B4J2F0 54 aa9.73□□□□□ -0.85
SMARCD3-211ENST00000485592 ISLRO14498 428 aa9.73□□□□□ -0.85
SMARCD3-211ENST00000485592 FABP1P07148 127 aa9.73□□□□□ -0.85
SMARCD3-211ENST00000485592 PAX9P55771 341 aa9.73□□□□□ -0.85
SMARCD3-211ENST00000485592 LYZP61626 148 aa9.73□□□□□ -0.85
SMARCD3-211ENST00000485592 C1orf194Q5T5A4 169 aa9.73□□□□□ -0.85
SMARCD3-211ENST00000485592 NRARPQ7Z6K4 114 aa9.73□□□□□ -0.85
SMARCD3-211ENST00000485592 C1orf158Q8N1D5 194 aa9.73□□□□□ -0.85
SMARCD3-211ENST00000485592 PPP1R14BQ96C90 147 aa9.73□□□□□ -0.85
SMARCD3-211ENST00000485592 SEC22CQ9BRL7 303 aa9.73□□□□□ -0.85
SMARCD3-211ENST00000485592 TMEM208Q9BTX3 173 aa9.73□□□□□ -0.85
SMARCD3-211ENST00000485592 ABCA13Q86UQ4 5058 aa9.73□□□□□ -0.85
SMARCD3-211ENST00000485592 FAM240BA0A1B0GVZ2 78 aa9.72□□□□□ -0.85
SMARCD3-211ENST00000485592 SOCS3O14543 225 aa9.72□□□□□ -0.85
SMARCD3-211ENST00000485592 CDK2AP2O75956 126 aa9.72□□□□□ -0.85
SMARCD3-211ENST00000485592 FAM78BQ5VT40 261 aa9.72□□□□□ -0.85
SMARCD3-211ENST00000485592 OR4D5Q8NGN0 318 aa9.72□□□□□ -0.85
SMARCD3-211ENST00000485592 OR1S1Q8NH92 325 aa9.72□□□□□ -0.85
SMARCD3-211ENST00000485592 DTD1Q8TEA8 209 aa9.72□□□□□ -0.85
SMARCD3-211ENST00000485592 SLC35E1Q96K37 410 aa9.72□□□□□ -0.85
SMARCD3-211ENST00000485592 RPRMQ9NS64 109 aa9.72□□□□□ -0.85
SMARCD3-211ENST00000485592 A0A0J9YX75 114 aa9.71□□□□□ -0.86
SMARCD3-211ENST00000485592 F6UB75 175 aa9.71□□□□□ -0.86
SMARCD3-211ENST00000485592 H2AFB2P0C5Z0 115 aa9.71□□□□□ -0.86
SMARCD3-211ENST00000485592 MEOX2P50222 304 aa9.71□□□□□ -0.86
SMARCD3-211ENST00000485592 ZNF90Q03938 601 aa9.71□□□□□ -0.86
SMARCD3-211ENST00000485592 TNP2Q05952 138 aa9.71□□□□□ -0.86
SMARCD3-211ENST00000485592 MZT2BQ6NZ67 158 aa9.71□□□□□ -0.86
SMARCD3-211ENST00000485592 OR8I2Q8N0Y5 310 aa9.71□□□□□ -0.86
SMARCD3-211ENST00000485592 MAPKAPK5-AS1Q8N8E1 139 aa9.71□□□□□ -0.86
SMARCD3-211ENST00000485592 ZNF431Q8TF32 576 aaPredicted RBP9.71□□□□□ -0.86
SMARCD3-211ENST00000485592 DOK5Q9P104 306 aa9.71□□□□□ -0.86
SMARCD3-211ENST00000485592 SNRPGP15A8MWD9 76 aa9.7□□□□□ -0.86
SMARCD3-211ENST00000485592 IAPPP10997 89 aa9.7□□□□□ -0.86
SMARCD3-211ENST00000485592 GPX4P36969 197 aaPredicted RBP9.7□□□□□ -0.86
SMARCD3-211ENST00000485592 ATP5IP56385 69 aaPredicted RBP9.7□□□□□ -0.86
SMARCD3-211ENST00000485592 ID3Q02535 119 aa9.7□□□□□ -0.86
SMARCD3-211ENST00000485592 C6orf223Q8N319 242 aa9.7□□□□□ -0.86
SMARCD3-211ENST00000485592 ENKURQ8TC29 256 aa9.7□□□□□ -0.86
SMARCD3-211ENST00000485592 C16orf92Q96LL3 132 aa9.7□□□□□ -0.86
SMARCD3-211ENST00000485592 IGF2BP2-AS1Q96M15 143 aa9.7□□□□□ -0.86
SMARCD3-211ENST00000485592 IGKV1D-37A0A075B6S9 117 aa9.69□□□□□ -0.86
SMARCD3-211ENST00000485592 NBDYA0A0U1RRE5 68 aa9.69□□□□□ -0.86
SMARCD3-211ENST00000485592 LYRM9A8MSI8 78 aa9.69□□□□□ -0.86
SMARCD3-211ENST00000485592 PRSS46E5RG02 174 aa9.69□□□□□ -0.86
SMARCD3-211ENST00000485592 CCSO14618 274 aa9.69□□□□□ -0.86
SMARCD3-211ENST00000485592 GALR1P47211 349 aa9.69□□□□□ -0.86
SMARCD3-211ENST00000485592 GAMTQ14353 236 aa9.69□□□□□ -0.86
SMARCD3-211ENST00000485592 SYNGR2O43760 224 aa9.68□□□□□ -0.86
SMARCD3-211ENST00000485592 INSP01308 110 aa9.68□□□□□ -0.86
SMARCD3-211ENST00000485592 IL5P05113 134 aa9.68□□□□□ -0.86
SMARCD3-211ENST00000485592 POLR2GP62487 172 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMARCD3-211ENST00000485592 OR2F1Q13607 317 aa9.68□□□□□ -0.86
SMARCD3-211ENST00000485592 IAH1Q2TAA2 248 aaPredicted RBP9.68□□□□□ -0.86
SMARCD3-211ENST00000485592 TRGV9Q99603 122 aa9.68□□□□□ -0.86
SMARCD3-211ENST00000485592 MARVELD1Q9BSK0 173 aa9.68□□□□□ -0.86
SMARCD3-211ENST00000485592 RCL1Q9Y2P8 373 aaKnown RBP9.68□□□□□ -0.86
SMARCD3-211ENST00000485592 A8MTW9 85 aa9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 F5H768 121 aa9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 NUDT3O95989 172 aa9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 CFDP00746 253 aaPredicted RBP9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 CCL18P55774 89 aa9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 B2MP61769 119 aa9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 RAB11AP62491 216 aa9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 C12orf45Q8N5I9 185 aaPredicted RBP9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 ZBTB8BQ8NAP8 495 aaPredicted RBP9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 ZNRF2Q8NHG8 242 aa9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 C20orf173Q96LM9 149 aa9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 SLC25A22Q9H936 323 aa9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 HSPG2P98160 4391 aa9.67□□□□□ -0.86
SMARCD3-211ENST00000485592 ZNF705GA8MUZ8 300 aaPredicted RBP9.66□□□□□ -0.86
SMARCD3-211ENST00000485592 H3BP45 60 aa9.66□□□□□ -0.86
SMARCD3-211ENST00000485592 WRBO00258 174 aa9.66□□□□□ -0.86
SMARCD3-211ENST00000485592 DUSP14O95147 198 aaKnown RBP9.66□□□□□ -0.86
SMARCD3-211ENST00000485592 DEFB130BP0DP73 79 aa9.66□□□□□ -0.86
SMARCD3-211ENST00000485592 DEFB130AP0DP74 79 aa9.66□□□□□ -0.86
SMARCD3-211ENST00000485592 S100A7P31151 101 aa9.66□□□□□ -0.86
SMARCD3-211ENST00000485592 IL15RAQ13261 267 aa9.66□□□□□ -0.86
SMARCD3-211ENST00000485592 SPINK13Q1W4C9 94 aa9.66□□□□□ -0.86
SMARCD3-211ENST00000485592 AMTNQ6UX39 209 aa9.66□□□□□ -0.86
SMARCD3-211ENST00000485592 SLC25A32Q9H2D1 315 aa9.66□□□□□ -0.86
SMARCD3-211ENST00000485592 C11orf1Q9H5F2 150 aa9.66□□□□□ -0.86
SMARCD3-211ENST00000485592 PMS2P5A8MQ11 134 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 INMT-MINDY4F8WBC2 141 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 M0R2Z0 102 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 SSSCA1O60232 199 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 MED6O75586 246 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 MBPP02686 304 aaPredicted RBP9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 ATP5G1P05496 136 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 TSPOP30536 169 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 ATP5G3P48201 142 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 CNN1P51911 297 aaKnown RBP9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 DEFA1P59665 94 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 DEFA3P59666 94 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 OR11H7Q8NGC8 314 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 OR1B1Q8NGR6 318 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms