RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 FGF7P21781 194 aa14.05□□□□□ -0.16
SNX17-206ENST00000484886 EWSR1Q01844 656 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNX17-206ENST00000484886 ATP6V1FQ16864 119 aa14.05□□□□□ -0.16
SNX17-206ENST00000484886 ZFAND6Q6FIF0 208 aa14.05□□□□□ -0.16
SNX17-206ENST00000484886 WDR83OSQ9Y284 106 aa14.05□□□□□ -0.16
SNX17-206ENST00000484886 AGRNO00468 2067 aa14.04□□□□□ -0.16
SNX17-206ENST00000484886 H0YIZ8 118 aa14.04□□□□□ -0.16
SNX17-206ENST00000484886 ISLRO14498 428 aa14.04□□□□□ -0.16
SNX17-206ENST00000484886 SPP1P10451 314 aa14.04□□□□□ -0.16
SNX17-206ENST00000484886 RPL7P18124 248 aaKnown RBP14.04□□□□□ -0.16
SNX17-206ENST00000484886 NHLH2Q02577 135 aa14.04□□□□□ -0.16
SNX17-206ENST00000484886 VWC2Q2TAL6 325 aa14.04□□□□□ -0.16
SNX17-206ENST00000484886 MIC13Q5XKP0 118 aa14.04□□□□□ -0.16
SNX17-206ENST00000484886 MORN3Q6PF18 240 aaPredicted RBP14.04□□□□□ -0.16
SNX17-206ENST00000484886 Q6ZRG5 221 aa14.04□□□□□ -0.16
SNX17-206ENST00000484886 GATAD1Q8WUU5 269 aa14.04□□□□□ -0.16
SNX17-206ENST00000484886 RNF24Q9Y225 148 aa14.04□□□□□ -0.16
SNX17-206ENST00000484886 SOCS3O14543 225 aa14.03□□□□□ -0.16
SNX17-206ENST00000484886 CLINT1Q14677 625 aa14.03□□□□□ -0.16
SNX17-206ENST00000484886 C10orf113Q5VZT2 155 aa14.03□□□□□ -0.16
SNX17-206ENST00000484886 PATE2Q6UY27 113 aa14.03□□□□□ -0.16
SNX17-206ENST00000484886 LINC00305Q7Z4B0 112 aa14.03□□□□□ -0.16
SNX17-206ENST00000484886 OR5C1Q8NGR4 320 aa14.03□□□□□ -0.16
SNX17-206ENST00000484886 A0A0J9YWU9 116 aa14.02□□□□□ -0.17
SNX17-206ENST00000484886 MPC2O95563 127 aa14.02□□□□□ -0.17
SNX17-206ENST00000484886 DEFB1P60022 68 aa14.02□□□□□ -0.17
SNX17-206ENST00000484886 CASC10Q5T4H9 136 aa14.02□□□□□ -0.17
SNX17-206ENST00000484886 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.02□□□□□ -0.17
SNX17-206ENST00000484886 IL17DQ8TAD2 202 aa14.02□□□□□ -0.17
SNX17-206ENST00000484886 RARRES2Q99969 163 aa14.02□□□□□ -0.17
SNX17-206ENST00000484886 MED28Q9H204 178 aa14.02□□□□□ -0.17
SNX17-206ENST00000484886 ELOA3CA0A087WX78 387 aaPredicted RBP14.01□□□□□ -0.17
SNX17-206ENST00000484886 IGKV3-20P01619 116 aa14.01□□□□□ -0.17
SNX17-206ENST00000484886 B2MP61769 119 aa14.01□□□□□ -0.17
SNX17-206ENST00000484886 NUTF2P61970 127 aaKnown RBP14.01□□□□□ -0.17
SNX17-206ENST00000484886 TMEM41BQ5BJD5 291 aa14.01□□□□□ -0.17
SNX17-206ENST00000484886 EBLN2Q6P2I7 272 aa14.01□□□□□ -0.17
SNX17-206ENST00000484886 OR11H2Q8NH07 326 aa14.01□□□□□ -0.17
SNX17-206ENST00000484886 THAP6Q8TBB0 222 aa14.01□□□□□ -0.17
SNX17-206ENST00000484886 LRRC20Q8TCA0 184 aa14.01□□□□□ -0.17
SNX17-206ENST00000484886 RPRMQ9NS64 109 aa14.01□□□□□ -0.17
SNX17-206ENST00000484886 H3BMM0 161 aa14□□□□□ -0.17
SNX17-206ENST00000484886 HLA-DRB4P13762 266 aa14□□□□□ -0.17
SNX17-206ENST00000484886 C4BPBP20851 252 aa14□□□□□ -0.17
SNX17-206ENST00000484886 OPCMLQ14982 345 aa14□□□□□ -0.17
SNX17-206ENST00000484886 RGS21Q2M5E4 152 aa14□□□□□ -0.17
SNX17-206ENST00000484886 FOXI2Q6ZQN5 318 aa14□□□□□ -0.17
SNX17-206ENST00000484886 OR1L4Q8NGR5 311 aa14□□□□□ -0.17
SNX17-206ENST00000484886 SAV1Q9H4B6 383 aaPredicted RBP14□□□□□ -0.17
SNX17-206ENST00000484886 DNAJC4Q9NNZ3 241 aa14□□□□□ -0.17
SNX17-206ENST00000484886 SLC39A9Q9NUM3 307 aa14□□□□□ -0.17
SNX17-206ENST00000484886 MBD2Q9UBB5 411 aa14□□□□□ -0.17
SNX17-206ENST00000484886 PXMP4Q9Y6I8 212 aa14□□□□□ -0.17
SNX17-206ENST00000484886 HLA-DRB4X5D2U9 266 aa14□□□□□ -0.17
SNX17-206ENST00000484886 MPDU1O75352 247 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 CXCL3P19876 107 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 RPL29P47914 159 aaKnown RBP13.99□□□□□ -0.17
SNX17-206ENST00000484886 PRR20EP86478 221 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 PRR20CP86479 221 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 PRR20DP86480 221 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 PRR20BP86481 221 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 PRR20AP86496 221 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 GDF5OSQ5U4N7 250 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 IGFL4Q6B9Z1 124 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 OR4B1Q8NGF8 309 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 TMEM37Q8WXS4 190 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 C20orf173Q96LM9 149 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 PFDN5Q99471 154 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 RNF126Q9BV68 326 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 CLEC5AQ9NY25 188 aa13.99□□□□□ -0.17
SNX17-206ENST00000484886 FCN2Q15485 313 aa13.98□□□□□ -0.17
SNX17-206ENST00000484886 BPIFA4PQ86YQ2 179 aa13.98□□□□□ -0.17
SNX17-206ENST00000484886 RNF182Q8N6D2 247 aa13.98□□□□□ -0.17
SNX17-206ENST00000484886 ZNF709Q8N972 641 aa13.98□□□□□ -0.17
SNX17-206ENST00000484886 C17orf77Q96MU5 243 aa13.98□□□□□ -0.17
SNX17-206ENST00000484886 NPCDR1Q9BY65 106 aa13.98□□□□□ -0.17
SNX17-206ENST00000484886 DNAH7Q8WXX0 4024 aa13.98□□□□□ -0.17
SNX17-206ENST00000484886 F6UB75 175 aa13.97□□□□□ -0.17
SNX17-206ENST00000484886 GIG44P09565 113 aaPredicted RBP13.97□□□□□ -0.17
SNX17-206ENST00000484886 RPL12P30050 165 aaKnown RBP13.97□□□□□ -0.17
SNX17-206ENST00000484886 SPATA31B1PQ5VZV4 182 aa13.97□□□□□ -0.17
SNX17-206ENST00000484886 ZNF738Q8NE65 137 aa13.97□□□□□ -0.17
SNX17-206ENST00000484886 C1QTNF4Q9BXJ3 329 aa13.97□□□□□ -0.17
SNX17-206ENST00000484886 XCL2Q9UBD3 114 aa13.97□□□□□ -0.17
SNX17-206ENST00000484886 HSPB11Q9Y547 144 aa13.97□□□□□ -0.17
SNX17-206ENST00000484886 A0A087X0K7 114 aa13.96□□□□□ -0.17
SNX17-206ENST00000484886 SNRPCP09234 159 aaKnown RBP13.96□□□□□ -0.17
SNX17-206ENST00000484886 FXYD7P58549 80 aa13.96□□□□□ -0.17
SNX17-206ENST00000484886 MORN5Q5VZ52 161 aa13.96□□□□□ -0.17
SNX17-206ENST00000484886 ATP5SQ99766 215 aa13.96□□□□□ -0.17
SNX17-206ENST00000484886 SMIM3Q9BZL3 60 aa13.96□□□□□ -0.17
SNX17-206ENST00000484886 KCNIP2Q9NS61 270 aa13.96□□□□□ -0.17
SNX17-206ENST00000484886 TRAV8-2A0A0B4J237 113 aa13.95□□□□□ -0.18
SNX17-206ENST00000484886 PMS2P11Q13670 270 aa13.95□□□□□ -0.18
SNX17-206ENST00000484886 FAM78BQ5VT40 261 aa13.95□□□□□ -0.18
SNX17-206ENST00000484886 OR11H7Q8NGC8 314 aa13.95□□□□□ -0.18
SNX17-206ENST00000484886 CHAC2Q8WUX2 184 aa13.95□□□□□ -0.18
SNX17-206ENST00000484886 TRAV5A0A0B4J249 113 aa13.94□□□□□ -0.18
SNX17-206ENST00000484886 A0A0J9YX75 114 aa13.94□□□□□ -0.18
SNX17-206ENST00000484886 CXorf65A6NEN9 183 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms