RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 SDHCQ99643 169 aaPredicted RBP20.33■□□□□ 0.85
HLA-C-207ENST00000484378 BTCP35070 178 aa20.32■□□□□ 0.84
HLA-C-207ENST00000484378 RAP2BP61225 183 aa20.32■□□□□ 0.84
HLA-C-207ENST00000484378 SMIM8Q96KF7 97 aa20.32■□□□□ 0.84
HLA-C-207ENST00000484378 NDUFAF3Q9BU61 184 aa20.32■□□□□ 0.84
HLA-C-207ENST00000484378 HIGD1AQ9Y241 93 aa20.32■□□□□ 0.84
HLA-C-207ENST00000484378 TEX48A0A1B0GUV7 120 aa20.31■□□□□ 0.84
HLA-C-207ENST00000484378 H3BRN7 92 aa20.31■□□□□ 0.84
HLA-C-207ENST00000484378 HBE1P02100 147 aa20.31■□□□□ 0.84
HLA-C-207ENST00000484378 RRAS2P62070 204 aaPredicted RBP20.31■□□□□ 0.84
HLA-C-207ENST00000484378 FGL1Q08830 312 aa20.31■□□□□ 0.84
HLA-C-207ENST00000484378 IAH1Q2TAA2 248 aaPredicted RBP20.31■□□□□ 0.84
HLA-C-207ENST00000484378 SLC25A39Q9BZJ4 359 aaPredicted RBP20.31■□□□□ 0.84
HLA-C-207ENST00000484378 PMS2P5A8MQ11 134 aa20.3■□□□□ 0.84
HLA-C-207ENST00000484378 HYPMO75409 117 aa20.3■□□□□ 0.84
HLA-C-207ENST00000484378 CCNKO75909 580 aa20.3■□□□□ 0.84
HLA-C-207ENST00000484378 METTL15P1P0C7V9 234 aa20.3■□□□□ 0.84
HLA-C-207ENST00000484378 LINC00869P0C866 280 aa20.3■□□□□ 0.84
HLA-C-207ENST00000484378 IL7P13232 177 aa20.3■□□□□ 0.84
HLA-C-207ENST00000484378 DLK1P80370 383 aa20.3■□□□□ 0.84
HLA-C-207ENST00000484378 C1orf158Q8N1D5 194 aa20.3■□□□□ 0.84
HLA-C-207ENST00000484378 SHANK2-AS3Q9BTD1 123 aa20.3■□□□□ 0.84
HLA-C-207ENST00000484378 HECTD4Q9Y4D8 3996 aa20.29■□□□□ 0.84
HLA-C-207ENST00000484378 OR5G3P0C626 314 aa20.29■□□□□ 0.84
HLA-C-207ENST00000484378 SELENOTP62341 195 aa20.29■□□□□ 0.84
HLA-C-207ENST00000484378 FAM222AQ5U5X8 452 aa20.29■□□□□ 0.84
HLA-C-207ENST00000484378 TMEM14EPQ6UXP3 125 aa20.29■□□□□ 0.84
HLA-C-207ENST00000484378 DKK2Q9UBU2 259 aa20.29■□□□□ 0.84
HLA-C-207ENST00000484378 LOC102723971A0A1B0GUV8 181 aa20.28■□□□□ 0.84
HLA-C-207ENST00000484378 A8MTW9 85 aa20.28■□□□□ 0.84
HLA-C-207ENST00000484378 RPL7P18124 248 aaKnown RBP20.28■□□□□ 0.84
HLA-C-207ENST00000484378 IGFL4Q6B9Z1 124 aa20.28■□□□□ 0.84
HLA-C-207ENST00000484378 RNF182Q8N6D2 247 aa20.28■□□□□ 0.84
HLA-C-207ENST00000484378 TMEM208Q9BTX3 173 aa20.28■□□□□ 0.84
HLA-C-207ENST00000484378 GSKIPQ9P0R6 139 aa20.28■□□□□ 0.84
HLA-C-207ENST00000484378 MGAT4CQ9UBM8 478 aa20.28■□□□□ 0.84
HLA-C-207ENST00000484378 DUSP14O95147 198 aaKnown RBP20.27■□□□□ 0.84
HLA-C-207ENST00000484378 P0DMU3 169 aa20.27■□□□□ 0.84
HLA-C-207ENST00000484378 FAM231AP0DMU4 169 aa20.27■□□□□ 0.84
HLA-C-207ENST00000484378 FAM231CP0DMU5 169 aa20.27■□□□□ 0.84
HLA-C-207ENST00000484378 CNN1P51911 297 aaKnown RBP20.27■□□□□ 0.84
HLA-C-207ENST00000484378 RRN3P1Q2M238 152 aa20.27■□□□□ 0.84
HLA-C-207ENST00000484378 AMTNQ6UX39 209 aa20.27■□□□□ 0.84
HLA-C-207ENST00000484378 ZBTB8BQ8NAP8 495 aaPredicted RBP20.27■□□□□ 0.84
HLA-C-207ENST00000484378 OR10P1Q8NGE3 313 aa20.27■□□□□ 0.84
HLA-C-207ENST00000484378 IGF2BP2-AS1Q96M15 143 aa20.27■□□□□ 0.84
HLA-C-207ENST00000484378 UHRF2Q96PU4 802 aa20.27■□□□□ 0.84
HLA-C-207ENST00000484378 NIPSNAP3BQ9BS92 247 aa20.27■□□□□ 0.84
HLA-C-207ENST00000484378 TRAV8-2A0A0B4J237 113 aa20.26■□□□□ 0.83
HLA-C-207ENST00000484378 FNDC10F2Z333 226 aa20.26■□□□□ 0.83
HLA-C-207ENST00000484378 PLP1P60201 277 aa20.26■□□□□ 0.83
HLA-C-207ENST00000484378 S100A7AQ86SG5 101 aa20.26■□□□□ 0.83
HLA-C-207ENST00000484378 ZNF738Q8NE65 137 aa20.26■□□□□ 0.83
HLA-C-207ENST00000484378 MITD1Q8WV92 249 aa20.26■□□□□ 0.83
HLA-C-207ENST00000484378 NPVFQ9HCQ7 196 aa20.26■□□□□ 0.83
HLA-C-207ENST00000484378 TSC22D2O75157 780 aa20.25■□□□□ 0.83
HLA-C-207ENST00000484378 TAS2R30P59541 319 aa20.25■□□□□ 0.83
HLA-C-207ENST00000484378 CNPY1Q3B7I2 92 aa20.25■□□□□ 0.83
HLA-C-207ENST00000484378 ARL6Q9H0F7 186 aa20.25■□□□□ 0.83
HLA-C-207ENST00000484378 C20orf85Q9H1P6 137 aa20.25■□□□□ 0.83
HLA-C-207ENST00000484378 RCL1Q9Y2P8 373 aaKnown RBP20.25■□□□□ 0.83
HLA-C-207ENST00000484378 YTHDF2Q9Y5A9 579 aaKnown RBP20.25■□□□□ 0.83
HLA-C-207ENST00000484378 SLC38A11Q08AI6 406 aa20.24■□□□□ 0.83
HLA-C-207ENST00000484378 SPINK13Q1W4C9 94 aa20.24■□□□□ 0.83
HLA-C-207ENST00000484378 TEPPQ6URK8 271 aa20.24■□□□□ 0.83
HLA-C-207ENST00000484378 OR11H7Q8NGC8 314 aa20.24■□□□□ 0.83
HLA-C-207ENST00000484378 M0R2Z0 102 aa20.23■□□□□ 0.83
HLA-C-207ENST00000484378 INSP01308 110 aa20.23■□□□□ 0.83
HLA-C-207ENST00000484378 POM121L12Q8N7R1 296 aa20.23■□□□□ 0.83
HLA-C-207ENST00000484378 K7EPK0 472 aa20.22■□□□□ 0.83
HLA-C-207ENST00000484378 HTN3P15516 51 aa20.22■□□□□ 0.83
HLA-C-207ENST00000484378 PLA2G2EQ9NZK7 142 aa20.22■□□□□ 0.83
HLA-C-207ENST00000484378 MBPP02686 304 aaPredicted RBP20.21■□□□□ 0.83
HLA-C-207ENST00000484378 ZNF546Q86UE3 836 aa20.21■□□□□ 0.83
HLA-C-207ENST00000484378 LRRC20Q8TCA0 184 aa20.21■□□□□ 0.83
HLA-C-207ENST00000484378 FAM210BQ96KR6 192 aa20.21■□□□□ 0.83
HLA-C-207ENST00000484378 ARV1Q9H2C2 271 aa20.21■□□□□ 0.83
HLA-C-207ENST00000484378 RNF24Q9Y225 148 aa20.21■□□□□ 0.83
HLA-C-207ENST00000484378 A0A087X0K7 114 aa20.2■□□□□ 0.82
HLA-C-207ENST00000484378 CCSO14618 274 aa20.2■□□□□ 0.82
HLA-C-207ENST00000484378 ZNF846Q147U1 533 aa20.2■□□□□ 0.82
HLA-C-207ENST00000484378 OXA1LQ15070 435 aa20.2■□□□□ 0.82
HLA-C-207ENST00000484378 C7orf66A4D0T2 115 aa20.19■□□□□ 0.82
HLA-C-207ENST00000484378 GOSR2O14653 212 aa20.19■□□□□ 0.82
HLA-C-207ENST00000484378 PLA2G10O15496 165 aa20.19■□□□□ 0.82
HLA-C-207ENST00000484378 LYRM1O43325 122 aa20.19■□□□□ 0.82
HLA-C-207ENST00000484378 DAD1P61803 113 aa20.19■□□□□ 0.82
HLA-C-207ENST00000484378 HIST1H1AQ02539 215 aaPredicted RBP20.19■□□□□ 0.82
HLA-C-207ENST00000484378 PATE2Q6UY27 113 aa20.19■□□□□ 0.82
HLA-C-207ENST00000484378 BAP18Q8IXM2 172 aa20.19■□□□□ 0.82
HLA-C-207ENST00000484378 BOLA2-SMG1P6H3BVE0 249 aa20.18■□□□□ 0.82
HLA-C-207ENST00000484378 L7N2F9 121 aa20.18■□□□□ 0.82
HLA-C-207ENST00000484378 CRXO43186 299 aaPredicted RBP20.18■□□□□ 0.82
HLA-C-207ENST00000484378 CXCL3P19876 107 aa20.18■□□□□ 0.82
HLA-C-207ENST00000484378 VAMP2P63027 116 aa20.18■□□□□ 0.82
HLA-C-207ENST00000484378 ARL16Q0P5N6 197 aa20.18■□□□□ 0.82
HLA-C-207ENST00000484378 PXDC1Q5TGL8 231 aa20.18■□□□□ 0.82
HLA-C-207ENST00000484378 GGACTQ9BVM4 153 aa20.18■□□□□ 0.82
HLA-C-207ENST00000484378 ZNF705GA8MUZ8 300 aaPredicted RBP20.17■□□□□ 0.82
HLA-C-207ENST00000484378 AGPAT2O15120 278 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms