RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CHCHD2Q9Y6H1 151 aaPredicted RBP0.31□□□□□ -2.36
SCAF11-207ENST00000484275 LY96Q9Y6Y9 160 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 FRMPD1Q5SYB0 1578 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 ANK1P16157 1881 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 ZGRF1Q86YA3 2104 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 CD109Q6YHK3 1445 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
SCAF11-207ENST00000484275 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.3□□□□□ -2.36
SCAF11-207ENST00000484275 CEP164Q9UPV0 1460 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 IGHV1-58A0A0C4DH39 117 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 TLCD2A6NGC4 264 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 C17orf112F2Z3M2 114 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 TMEM256-PLSCR3K7ERE1 68 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 TAX1BP3O14907 124 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 CCL25O15444 150 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 NUPR1O60356 82 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 DNAL4O96015 105 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 HSD11B1P28845 292 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 MRPS25P82663 173 aaKnown RBP0.3□□□□□ -2.36
SCAF11-207ENST00000484275 TAF1AQ15573 450 aaPredicted RBP0.3□□□□□ -2.36
SCAF11-207ENST00000484275 SPRNQ5BIV9 151 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 HAGHLQ6PII5 290 aaPredicted RBP0.3□□□□□ -2.36
SCAF11-207ENST00000484275 Q8N6K4 173 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 OR5D14Q8NGL3 314 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 OR2T35Q8NGX2 323 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 OR10K1Q8NGX5 313 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 STAG3L4Q8TBR4 150 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 ZNF431Q8TF32 576 aaPredicted RBP0.3□□□□□ -2.36
SCAF11-207ENST00000484275 MUCL1Q96DR8 90 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 TEX37Q96LM6 180 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 PCTPQ9UKL6 214 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 PYCARDQ9ULZ3 195 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 ARL5AQ9Y689 179 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 ERBINQ96RT1 1412 aa0.3□□□□□ -2.36
SCAF11-207ENST00000484275 KCPQ6ZWJ8 1503 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 ASCC3Q8N3C0 2202 aaKnown RBP0.29□□□□□ -2.36
SCAF11-207ENST00000484275 A0A087WSZ3 146 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 TRAV10A0A0B4J240 114 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 E7EUB6 86 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 AIPO00170 330 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 CST8O60676 142 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 ERC2-IT1O76042 136 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 ATG12O94817 140 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 NDUFC2O95298 119 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 C1QBP02746 253 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 OR10J4P0C629 311 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 HLA-EP13747 358 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 DYNLT3P51808 116 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 ROMO1P60602 79 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 ARF6P62330 175 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 MRPS15P82914 257 aaKnown RBP0.29□□□□□ -2.36
SCAF11-207ENST00000484275 KRTAP21-1Q3LI58 79 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 SCGB2B2Q4G0G5 96 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 EIF5AL1Q6IS14 154 aaKnown RBP0.29□□□□□ -2.36
SCAF11-207ENST00000484275 LINC00575Q6W349 94 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 GRINAQ7Z429 371 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 TEN1Q86WV5 123 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 GKN2Q86XP6 184 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 OR5AS1Q8N127 324 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 PXT1Q8NFP0 134 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 PHB2Q99623 299 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 C9orf16Q9BUW7 83 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 PBOV1Q9GZY1 135 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 TAS2R7Q9NYW3 318 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 OR52A1Q9UKL2 312 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 TNFSF18Q9UNG2 199 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 ZNF462Q96JM2 2506 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 EIF3AQ14152 1382 aaKnown RBP0.29□□□□□ -2.36
SCAF11-207ENST00000484275 UNC13CQ8NB66 2214 aa0.29□□□□□ -2.36
SCAF11-207ENST00000484275 MEGF8Q7Z7M0 2845 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 SYNMO15061 1565 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 F8W1H4 67 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 G3V2T6 193 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 H3BRM9 83 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 M0R233 179 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 M0R378 163 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 BANF1O75531 89 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 CXCL8P10145 99 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 COX7CP15954 63 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 HOXA6P31267 233 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 CAPZBP47756 277 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 EFNA4P52798 201 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 NCALDP61601 193 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 VBP1P61758 197 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 CDK6Q00534 326 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 KRTAP26-1Q6PEX3 210 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 DHRS4L2Q6PKH6 230 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 PATE2Q6UY27 113 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 SBSPONQ8IVN8 264 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 IFT20Q8IY31 132 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 OR5D16Q8NGK9 328 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 POP5Q969H6 163 aaKnown RBP0.28□□□□□ -2.36
SCAF11-207ENST00000484275 LYSMD1Q96S90 227 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 NPCDR1Q9BY65 106 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 HSPB8Q9UJY1 196 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 MYH1P12882 1939 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 RFX7Q2KHR2 1363 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 NAV2Q8IVL1 2488 aa0.28□□□□□ -2.36
SCAF11-207ENST00000484275 ZDBF2Q9HCK1 2354 aa0.27□□□□□ -2.37
SCAF11-207ENST00000484275 TRAV27A0A087WT01 109 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms