RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 ID1P41134 155 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 GALR1P47211 349 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 TFPI2P48307 235 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 ARL16Q0P5N6 197 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 DEFB135Q30KP9 77 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 TMEM41BQ5BJD5 291 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 Q6ZRG5 221 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 OR8I2Q8N0Y5 310 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 UBQLN2Q9UHD9 624 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 HIGD1AQ9Y241 93 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 WDR83OSQ9Y284 106 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 HERC2O95714 4834 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 IGSF23A1L1A6 192 aa7.35□□□□□ -1.23
CPSF4-213ENST00000484112 ISLRO14498 428 aa7.35□□□□□ -1.23
CPSF4-213ENST00000484112 RPL7P18124 248 aaKnown RBP7.35□□□□□ -1.23
CPSF4-213ENST00000484112 RPL29P47914 159 aaKnown RBP7.35□□□□□ -1.23
CPSF4-213ENST00000484112 CAMLGP49069 296 aa7.35□□□□□ -1.23
CPSF4-213ENST00000484112 PSMB3P49720 205 aa7.35□□□□□ -1.23
CPSF4-213ENST00000484112 FGL1Q08830 312 aa7.35□□□□□ -1.23
CPSF4-213ENST00000484112 SPATA31B1PQ5VZV4 182 aa7.35□□□□□ -1.23
CPSF4-213ENST00000484112 TMEM182Q6ZP80 229 aaPredicted RBP7.35□□□□□ -1.23
CPSF4-213ENST00000484112 WFDC3Q8IUB2 231 aa7.35□□□□□ -1.23
CPSF4-213ENST00000484112 TMEM217Q8N7C4 229 aa7.35□□□□□ -1.23
CPSF4-213ENST00000484112 PFDN5Q99471 154 aa7.35□□□□□ -1.23
CPSF4-213ENST00000484112 SHANK2-AS3Q9BTD1 123 aa7.35□□□□□ -1.23
CPSF4-213ENST00000484112 SLC25A39Q9BZJ4 359 aaPredicted RBP7.35□□□□□ -1.23
CPSF4-213ENST00000484112 MED28Q9H204 178 aa7.35□□□□□ -1.23
CPSF4-213ENST00000484112 KCNIP2Q9NS61 270 aa7.35□□□□□ -1.23
CPSF4-213ENST00000484112 H0YIZ8 118 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 H3BRN7 92 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 SPP1P10451 314 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 GATA2P23769 480 aaPredicted RBP7.34□□□□□ -1.23
CPSF4-213ENST00000484112 DEFB131AP59861 70 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 PRR20EP86478 221 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 PRR20CP86479 221 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 PRR20DP86480 221 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 PRR20BP86481 221 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 PRR20AP86496 221 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 LRRC37A5PQ49AS3 106 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 MORN3Q6PF18 240 aaPredicted RBP7.34□□□□□ -1.23
CPSF4-213ENST00000484112 APRG1Q8IVJ8 170 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 STHQ8IWL8 128 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 OR5C1Q8NGR4 320 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 OR1L4Q8NGR5 311 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 THAP6Q8TBB0 222 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 PHLDA1Q8WV24 401 aaPredicted RBP7.34□□□□□ -1.23
CPSF4-213ENST00000484112 MGST2Q99735 147 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 ARL6Q9H0F7 186 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 CSTL1Q9H114 145 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 ARV1Q9H2C2 271 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 OR5AC2Q9NZP5 309 aa7.34□□□□□ -1.23
CPSF4-213ENST00000484112 SOCS3O14543 225 aa7.33□□□□□ -1.24
CPSF4-213ENST00000484112 C1QBP02746 253 aa7.33□□□□□ -1.24
CPSF4-213ENST00000484112 OR5G3P0C626 314 aa7.33□□□□□ -1.24
CPSF4-213ENST00000484112 RPL35AP18077 110 aaKnown RBP7.33□□□□□ -1.24
CPSF4-213ENST00000484112 CXCL2P19875 107 aa7.33□□□□□ -1.24
CPSF4-213ENST00000484112 OPCMLQ14982 345 aa7.33□□□□□ -1.24
CPSF4-213ENST00000484112 FCN2Q15485 313 aa7.33□□□□□ -1.24
CPSF4-213ENST00000484112 ZFP69Q49AA0 526 aa7.33□□□□□ -1.24
CPSF4-213ENST00000484112 GATAD1Q8WUU5 269 aa7.33□□□□□ -1.24
CPSF4-213ENST00000484112 CLUHP3Q96NS8 147 aa7.33□□□□□ -1.24
CPSF4-213ENST00000484112 RNF126Q9BV68 326 aa7.33□□□□□ -1.24
CPSF4-213ENST00000484112 DNAJC4Q9NNZ3 241 aa7.33□□□□□ -1.24
CPSF4-213ENST00000484112 A0A087X0K7 114 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 UBE2L5PA0A1B0GUS4 154 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 C17orf112F2Z3M2 114 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 COX7A2P2O60397 106 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 GIPP09681 153 aaPredicted RBP7.32□□□□□ -1.24
CPSF4-213ENST00000484112 ZNF688P0C7X2 276 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 CXCL3P19876 107 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 FGF7P21781 194 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 RPL12P30050 165 aaKnown RBP7.32□□□□□ -1.24
CPSF4-213ENST00000484112 B2MP61769 119 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 NUTF2P61970 127 aaKnown RBP7.32□□□□□ -1.24
CPSF4-213ENST00000484112 NHLH2Q02577 135 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 PSMG4Q5JS54 123 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 C10orf113Q5VZT2 155 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 LGALS9CQ6DKI2 356 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 PATE2Q6UY27 113 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 LINC00305Q7Z4B0 112 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 TRPT1Q86TN4 253 aaKnown RBP7.32□□□□□ -1.24
CPSF4-213ENST00000484112 BPIFA4PQ86YQ2 179 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 FAM24BQ8N5W8 94 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 OR11H7Q8NGC8 314 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 NPCDR1Q9BY65 106 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 PARD6GQ9BYG4 376 aaPredicted RBP7.32□□□□□ -1.24
CPSF4-213ENST00000484112 SLC25A32Q9H2D1 315 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 SLC25A22Q9H936 323 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 SLC39A9Q9NUM3 307 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 CLEC5AQ9NY25 188 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 HSPB11Q9Y547 144 aa7.32□□□□□ -1.24
CPSF4-213ENST00000484112 ATF4P18848 351 aaPredicted RBP7.31□□□□□ -1.24
CPSF4-213ENST00000484112 GUK1Q16774 197 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 LEMD1Q68G75 181 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 FOXI2Q6ZQN5 318 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 ZNF709Q8N972 641 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 TMEM37Q8WXS4 190 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 RNF183Q96D59 192 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 ATP5SQ99766 215 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 RSG1Q9BU20 258 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms