RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 UNQ5815/PRO19632Q6UWF5 114 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 LINC00305Q7Z4B0 112 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 OR5AU1Q8NGC0 362 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 OR51G1Q8NGK1 321 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 SGMS2Q8NHU3 365 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 TMEM37Q8WXS4 190 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 NOL4LQ96MY1 436 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-216ENST00000484087 CITED2Q99967 270 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-216ENST00000484087 PAXXQ9BUH6 204 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 PARLQ9H300 379 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 SDF2L1Q9HCN8 221 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 GAR1Q9NY12 217 aaKnown RBP5.4□□□□□ -1.54
BRCA1-216ENST00000484087 RNF24Q9Y225 148 aa5.4□□□□□ -1.54
BRCA1-216ENST00000484087 IGLV11-55A0A075B6I3 123 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 A0A1B0GUS0 222 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 A0A1W2PRE2 83 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 PSMB11A5LHX3 300 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 CXorf65A6NEN9 183 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 K7EIM0 57 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 PLXNB1O43157 2135 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 OR2C1O95371 312 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 MT-ND4LP03901 98 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 IGLC1P0CG04 106 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 AKR1C3P42330 323 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 ATP5G3P48201 142 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 LYZP61626 148 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 ADIRFQ15847 76 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 ECSCRQ19T08 205 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 Q56UQ5 140 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 C19orf35Q6ZS72 473 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 LCNL1Q6ZST4 164 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 C18orf65Q6ZTR6 163 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 C16orf82Q7Z2V1 217 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 C5orf56Q8N8D9 126 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 OR5T1Q8NG75 326 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 Q8WTZ3 238 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 TXN2Q99757 166 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 CTDSP1Q9GZU7 261 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 OR51M1Q9H341 326 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 ZNF355PQ9NSJ1 428 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 C21orf62Q9NYP8 219 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 MRPL36Q9P0J6 103 aaKnown RBP5.39□□□□□ -1.55
BRCA1-216ENST00000484087 HIGD1AQ9Y241 93 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 ATP6V0E1O15342 81 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 NDUFB4O95168 129 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 TOMM40O96008 361 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 PRB2P02812 416 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-216ENST00000484087 PSG1P11464 419 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 YPEL3P61236 119 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-216ENST00000484087 NDPQ00604 133 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 KIAA0141Q14154 515 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-216ENST00000484087 TIGITQ495A1 244 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 TCTEX1D4Q5JR98 221 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 KHDC1LQ5JSQ8 128 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 ZNF329Q86UD4 541 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 Q8N2B8 174 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 VN1R17PQ8TDU5 208 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 TMEM190Q8WZ59 177 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 HSPB9Q9BQS6 159 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 TCEAL7Q9BRU2 100 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 SLC25A2Q9BXI2 301 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 PRSS22Q9GZN4 317 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 TMEM242Q9NWH2 141 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 FBXL7Q9UJT9 491 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 DMRT1Q9Y5R6 373 aa5.39□□□□□ -1.55
BRCA1-216ENST00000484087 PPP1R2P9O14990 202 aa5.38□□□□□ -1.55
BRCA1-216ENST00000484087 OR2J3O76001 311 aa5.38□□□□□ -1.55
BRCA1-216ENST00000484087 OR10J4P0C629 311 aa5.38□□□□□ -1.55
BRCA1-216ENST00000484087 S100PP25815 95 aa5.38□□□□□ -1.55
BRCA1-216ENST00000484087 RPL23P62829 140 aaKnown RBP5.38□□□□□ -1.55
BRCA1-216ENST00000484087 ASPHD1Q5U4P2 390 aa5.38□□□□□ -1.55
BRCA1-216ENST00000484087 PATE2Q6UY27 113 aa5.38□□□□□ -1.55
BRCA1-216ENST00000484087 NECAP1Q8NC96 275 aa5.38□□□□□ -1.55
BRCA1-216ENST00000484087 WIPF2Q8TF74 440 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-216ENST00000484087 C11orf52Q96A22 123 aa5.38□□□□□ -1.55
BRCA1-216ENST00000484087 EEF1AKMT3Q96AZ1 226 aa5.38□□□□□ -1.55
BRCA1-216ENST00000484087 OR5B12Q96R08 314 aa5.38□□□□□ -1.55
BRCA1-216ENST00000484087 MLXQ9UH92 298 aa5.38□□□□□ -1.55
BRCA1-216ENST00000484087 YTHDF2Q9Y5A9 579 aaKnown RBP5.38□□□□□ -1.55
BRCA1-216ENST00000484087 DNAH3Q8TD57 4116 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 TRAV5A0A0B4J249 113 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 TRAV41A0A0B4J266 112 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 HELTA6NFD8 242 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 G3V4G9 280 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 H7BYZ3 331 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 M0QZ24 198 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 NDUFB8O95169 186 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 IL4P05112 153 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 EGR2P11161 476 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-216ENST00000484087 FCGR2BP31994 310 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-216ENST00000484087 DEFA6Q01524 100 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 RNF212Q495C1 297 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 BPIFA4PQ86YQ2 179 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 RNF125Q96EQ8 232 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 ZNF503Q96F45 646 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 FAM167A-AS1Q96KT0 104 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 DUX3Q96PT4 197 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
BRCA1-216ENST00000484087 TRBV7-1A0A0A6YYK4 115 aa5.36□□□□□ -1.55
BRCA1-216ENST00000484087 COLCA2A8K830 154 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms