RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 ZFAND3Q9H8U3 227 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 DAZ1Q9NQZ3 744 aaKnown RBP10.73□□□□□ -0.69
SMAD9-204ENST00000483941 TMEM14CQ9P0S9 112 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 ARL2-SNX15V9GYD0 113 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 WNK1Q9H4A3 2382 aa10.73□□□□□ -0.69
SMAD9-204ENST00000483941 ZNF98A6NK75 572 aa10.72□□□□□ -0.69
SMAD9-204ENST00000483941 H3BRN7 92 aa10.72□□□□□ -0.69
SMAD9-204ENST00000483941 TRBV12-3P01733 135 aa10.72□□□□□ -0.69
SMAD9-204ENST00000483941 CD5P06127 495 aa10.72□□□□□ -0.69
SMAD9-204ENST00000483941 ARL14EPLP0DKL9 152 aa10.72□□□□□ -0.69
SMAD9-204ENST00000483941 CRYBB3P26998 211 aa10.72□□□□□ -0.69
SMAD9-204ENST00000483941 MEOX2P50222 304 aa10.72□□□□□ -0.69
SMAD9-204ENST00000483941 PEA15Q15121 130 aa10.72□□□□□ -0.69
SMAD9-204ENST00000483941 NDUFA11Q86Y39 141 aa10.72□□□□□ -0.69
SMAD9-204ENST00000483941 OR4F17Q8NGA8 305 aa10.72□□□□□ -0.69
SMAD9-204ENST00000483941 PCNPQ8WW12 178 aaKnown RBP10.72□□□□□ -0.69
SMAD9-204ENST00000483941 OR4F4Q96R69 305 aa10.72□□□□□ -0.69
SMAD9-204ENST00000483941 PEMTQ9UBM1 199 aa10.72□□□□□ -0.69
SMAD9-204ENST00000483941 RYR3Q15413 4870 aa10.71□□□□□ -0.69
SMAD9-204ENST00000483941 IGHV3-35A0A0C4DH35 117 aa10.71□□□□□ -0.69
SMAD9-204ENST00000483941 M0QZ24 198 aa10.71□□□□□ -0.69
SMAD9-204ENST00000483941 GCHFRP30047 84 aa10.71□□□□□ -0.69
SMAD9-204ENST00000483941 GUK1Q16774 197 aa10.71□□□□□ -0.69
SMAD9-204ENST00000483941 COMMD7Q86VX2 200 aa10.71□□□□□ -0.69
SMAD9-204ENST00000483941 OR8I2Q8N0Y5 310 aa10.71□□□□□ -0.69
SMAD9-204ENST00000483941 EIF4E3Q8N5X7 224 aaKnown RBP10.71□□□□□ -0.69
SMAD9-204ENST00000483941 OR11H1Q8NG94 326 aa10.71□□□□□ -0.69
SMAD9-204ENST00000483941 FAM210AQ96ND0 272 aa10.71□□□□□ -0.69
SMAD9-204ENST00000483941 UHRF2Q96PU4 802 aa10.71□□□□□ -0.69
SMAD9-204ENST00000483941 CITED2Q99967 270 aaPredicted RBP10.71□□□□□ -0.69
SMAD9-204ENST00000483941 EIF5A2Q9GZV4 153 aaKnown RBP10.71□□□□□ -0.69
SMAD9-204ENST00000483941 IGHV4OR15-8A0A075B7B6 117 aa10.7□□□□□ -0.7
SMAD9-204ENST00000483941 A0A087WW49 117 aa10.7□□□□□ -0.7
SMAD9-204ENST00000483941 A0A1B0GV50 99 aa10.7□□□□□ -0.7
SMAD9-204ENST00000483941 HMGB3O15347 200 aaKnown RBP10.7□□□□□ -0.7
SMAD9-204ENST00000483941 NDUFS6O75380 124 aaKnown RBP10.7□□□□□ -0.7
SMAD9-204ENST00000483941 HIST1H1EP10412 219 aaKnown RBP10.7□□□□□ -0.7
SMAD9-204ENST00000483941 HOXD3P31249 432 aaPredicted RBP10.7□□□□□ -0.7
SMAD9-204ENST00000483941 GALR1P47211 349 aa10.7□□□□□ -0.7
SMAD9-204ENST00000483941 FGF8P55075 233 aaPredicted RBP10.7□□□□□ -0.7
SMAD9-204ENST00000483941 UBE2L3P68036 154 aaKnown RBP10.7□□□□□ -0.7
SMAD9-204ENST00000483941 SAMD13Q5VXD3 122 aa10.7□□□□□ -0.7
SMAD9-204ENST00000483941 SPATA31B1PQ5VZV4 182 aa10.7□□□□□ -0.7
SMAD9-204ENST00000483941 FAM167A-AS1Q96KT0 104 aa10.7□□□□□ -0.7
SMAD9-204ENST00000483941 SLC25A2Q9BXI2 301 aa10.7□□□□□ -0.7
SMAD9-204ENST00000483941 GNG13Q9P2W3 67 aa10.7□□□□□ -0.7
SMAD9-204ENST00000483941 HELTA6NFD8 242 aa10.69□□□□□ -0.7
SMAD9-204ENST00000483941 RBFOX3A6NFN3 312 aa10.69□□□□□ -0.7
SMAD9-204ENST00000483941 A8MWP6 167 aa10.69□□□□□ -0.7
SMAD9-204ENST00000483941 CCL24O00175 119 aa10.69□□□□□ -0.7
SMAD9-204ENST00000483941 BUB3O43684 328 aa10.69□□□□□ -0.7
SMAD9-204ENST00000483941 MYCNOSP40205 109 aa10.69□□□□□ -0.7
SMAD9-204ENST00000483941 KLF5Q13887 457 aaPredicted RBP10.69□□□□□ -0.7
SMAD9-204ENST00000483941 SSX7Q7RTT5 188 aa10.69□□□□□ -0.7
SMAD9-204ENST00000483941 SCRT1Q9BWW7 348 aa10.69□□□□□ -0.7
SMAD9-204ENST00000483941 VAX2Q9UIW0 290 aa10.69□□□□□ -0.7
SMAD9-204ENST00000483941 U3KQE9 123 aa10.69□□□□□ -0.7
SMAD9-204ENST00000483941 TRAV5A0A0B4J249 113 aa10.68□□□□□ -0.7
SMAD9-204ENST00000483941 IGHV7-4-1A0A0J9YVY3 117 aa10.68□□□□□ -0.7
SMAD9-204ENST00000483941 A0A1W2PRE2 83 aa10.68□□□□□ -0.7
SMAD9-204ENST00000483941 BCL2P10415 239 aa10.68□□□□□ -0.7
SMAD9-204ENST00000483941 ATF4P18848 351 aaPredicted RBP10.68□□□□□ -0.7
SMAD9-204ENST00000483941 PDE6HQ13956 83 aa10.68□□□□□ -0.7
SMAD9-204ENST00000483941 C8orf86Q6ZUL3 223 aa10.68□□□□□ -0.7
SMAD9-204ENST00000483941 C11orf44Q8N8P7 122 aa10.68□□□□□ -0.7
SMAD9-204ENST00000483941 TCEAL7Q9BRU2 100 aa10.68□□□□□ -0.7
SMAD9-204ENST00000483941 NBEAP1P0C6P0 100 aa10.67□□□□□ -0.7
SMAD9-204ENST00000483941 SYNJ2BPP57105 145 aa10.67□□□□□ -0.7
SMAD9-204ENST00000483941 CCL20P78556 96 aa10.67□□□□□ -0.7
SMAD9-204ENST00000483941 PSG9Q00887 426 aa10.67□□□□□ -0.7
SMAD9-204ENST00000483941 FHL3Q13643 280 aa10.67□□□□□ -0.7
SMAD9-204ENST00000483941 ZNF506Q5JVG8 444 aa10.67□□□□□ -0.7
SMAD9-204ENST00000483941 UNQ9165/PRO28630Q6UXU0 137 aa10.67□□□□□ -0.7
SMAD9-204ENST00000483941 LYPD1Q8N2G4 141 aa10.67□□□□□ -0.7
SMAD9-204ENST00000483941 CLEC5AQ9NY25 188 aa10.67□□□□□ -0.7
SMAD9-204ENST00000483941 SMPXQ9UHP9 88 aa10.67□□□□□ -0.7
SMAD9-204ENST00000483941 A0A1W2PRX2 142 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 ZNF785A8K8V0 405 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 PDE6DO43924 150 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 ZNF253O75346 499 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 GP9P14770 177 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 HAGHQ16775 308 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 TOR2AQ5JU69 321 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 MORN5Q5VZ52 161 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 CST9LP1Q5W188 147 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 LEMD1Q68G75 181 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 C16orf54Q6UWD8 224 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 OR9G4Q8NGQ1 327 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 FXYD5Q96DB9 178 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 TREM1Q9NP99 234 aa10.66□□□□□ -0.7
SMAD9-204ENST00000483941 DNAH3Q8TD57 4116 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 IGHV3OR16-8A0A075B7F1 116 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 LOC102723971A0A1B0GUV8 181 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 F6UZH7 168 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 ZNF207O43670 478 aaKnown RBP10.65□□□□□ -0.7
SMAD9-204ENST00000483941 PAGE4O60829 102 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 OR10J4P0C629 311 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 MEF2BQ02080 365 aaPredicted RBP10.65□□□□□ -0.7
SMAD9-204ENST00000483941 DEFB136Q30KP8 78 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 TM4SF20Q53R12 229 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms