RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 PRR20DP86480 221 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 PRR20BP86481 221 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 PRR20AP86496 221 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 EWSR1Q01844 656 aaKnown RBP eCLIP13.19□□□□□ -0.3
HDAC6-225ENST00000483506 BAXQ07812 192 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 RAB31Q13636 194 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 LRRC37A5PQ49AS3 106 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 MORN3Q6PF18 240 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-225ENST00000483506 RNF126Q9BV68 326 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 ARV1Q9H2C2 271 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 RNF24Q9Y225 148 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 UBE2L5PA0A1B0GUS4 154 aa13.18□□□□□ -0.3
HDAC6-225ENST00000483506 MPDU1O75352 247 aa13.18□□□□□ -0.3
HDAC6-225ENST00000483506 MPC2O95563 127 aa13.18□□□□□ -0.3
HDAC6-225ENST00000483506 GIG44P09565 113 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-225ENST00000483506 PET100P0DJ07 73 aa13.18□□□□□ -0.3
HDAC6-225ENST00000483506 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
HDAC6-225ENST00000483506 TMEM41BQ5BJD5 291 aa13.18□□□□□ -0.3
HDAC6-225ENST00000483506 ACTL10Q5JWF8 245 aa13.18□□□□□ -0.3
HDAC6-225ENST00000483506 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.18□□□□□ -0.3
HDAC6-225ENST00000483506 UHRF2Q96PU4 802 aa13.18□□□□□ -0.3
HDAC6-225ENST00000483506 KMT2CQ8NEZ4 4911 aaKnown RBP13.18□□□□□ -0.3
HDAC6-225ENST00000483506 ELOA3CA0A087WX78 387 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-225ENST00000483506 H3BMM0 161 aa13.17□□□□□ -0.3
HDAC6-225ENST00000483506 CA1P00915 261 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-225ENST00000483506 HLA-DRB4P13762 266 aa13.17□□□□□ -0.3
HDAC6-225ENST00000483506 RPL29P47914 159 aaKnown RBP13.17□□□□□ -0.3
HDAC6-225ENST00000483506 NHLH2Q02577 135 aa13.17□□□□□ -0.3
HDAC6-225ENST00000483506 OPCMLQ14982 345 aa13.17□□□□□ -0.3
HDAC6-225ENST00000483506 TMEM37Q8WXS4 190 aa13.17□□□□□ -0.3
HDAC6-225ENST00000483506 RSG1Q9BU20 258 aa13.17□□□□□ -0.3
HDAC6-225ENST00000483506 HLA-DRB4X5D2U9 266 aa13.17□□□□□ -0.3
HDAC6-225ENST00000483506 STARD9Q9P2P6 4700 aa13.17□□□□□ -0.3
HDAC6-225ENST00000483506 A0A087X0K7 114 aa13.16□□□□□ -0.3
HDAC6-225ENST00000483506 MRPS12O15235 138 aaKnown RBP13.16□□□□□ -0.3
HDAC6-225ENST00000483506 LYL1P12980 280 aa13.16□□□□□ -0.3
HDAC6-225ENST00000483506 CASC10Q5T4H9 136 aa13.16□□□□□ -0.3
HDAC6-225ENST00000483506 FOXI2Q6ZQN5 318 aa13.16□□□□□ -0.3
HDAC6-225ENST00000483506 OR5C1Q8NGR4 320 aa13.16□□□□□ -0.3
HDAC6-225ENST00000483506 CLUHP3Q96NS8 147 aa13.16□□□□□ -0.3
HDAC6-225ENST00000483506 SAV1Q9H4B6 383 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-225ENST00000483506 COX7A2P2O60397 106 aa13.15□□□□□ -0.3
HDAC6-225ENST00000483506 ATF4P18848 351 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-225ENST00000483506 CXCL3P19876 107 aa13.15□□□□□ -0.3
HDAC6-225ENST00000483506 C4BPBP20851 252 aa13.15□□□□□ -0.3
HDAC6-225ENST00000483506 FGF7P21781 194 aa13.15□□□□□ -0.3
HDAC6-225ENST00000483506 SPATA31B1PQ5VZV4 182 aa13.15□□□□□ -0.3
HDAC6-225ENST00000483506 MIC13Q5XKP0 118 aa13.15□□□□□ -0.3
HDAC6-225ENST00000483506 LINC00305Q7Z4B0 112 aa13.15□□□□□ -0.3
HDAC6-225ENST00000483506 RGS21Q2M5E4 152 aa13.14□□□□□ -0.31
HDAC6-225ENST00000483506 C10orf113Q5VZT2 155 aa13.14□□□□□ -0.31
HDAC6-225ENST00000483506 Q6ZRG5 221 aa13.14□□□□□ -0.31
HDAC6-225ENST00000483506 IL17DQ8TAD2 202 aa13.14□□□□□ -0.31
HDAC6-225ENST00000483506 C16orf92Q96LL3 132 aa13.14□□□□□ -0.31
HDAC6-225ENST00000483506 C20orf173Q96LM9 149 aa13.14□□□□□ -0.31
HDAC6-225ENST00000483506 LINC00052Q96N35 136 aa13.14□□□□□ -0.31
HDAC6-225ENST00000483506 PFDN5Q99471 154 aa13.14□□□□□ -0.31
HDAC6-225ENST00000483506 NPCDR1Q9BY65 106 aa13.14□□□□□ -0.31
HDAC6-225ENST00000483506 DNAJC4Q9NNZ3 241 aa13.14□□□□□ -0.31
HDAC6-225ENST00000483506 SLC39A9Q9NUM3 307 aa13.14□□□□□ -0.31
HDAC6-225ENST00000483506 TRAV8-2A0A0B4J237 113 aa13.13□□□□□ -0.31
HDAC6-225ENST00000483506 B2MP61769 119 aa13.13□□□□□ -0.31
HDAC6-225ENST00000483506 GDF5OSQ5U4N7 250 aa13.13□□□□□ -0.31
HDAC6-225ENST00000483506 OR11H7Q8NGC8 314 aa13.13□□□□□ -0.31
HDAC6-225ENST00000483506 OR1L4Q8NGR5 311 aa13.13□□□□□ -0.31
HDAC6-225ENST00000483506 MBD2Q9UBB5 411 aa13.13□□□□□ -0.31
HDAC6-225ENST00000483506 PXMP4Q9Y6I8 212 aa13.13□□□□□ -0.31
HDAC6-225ENST00000483506 A8MTW9 85 aa13.12□□□□□ -0.31
HDAC6-225ENST00000483506 CXCL2P19875 107 aa13.12□□□□□ -0.31
HDAC6-225ENST00000483506 OXA1LQ15070 435 aa13.12□□□□□ -0.31
HDAC6-225ENST00000483506 FCN2Q15485 313 aa13.12□□□□□ -0.31
HDAC6-225ENST00000483506 MORN5Q5VZ52 161 aa13.12□□□□□ -0.31
HDAC6-225ENST00000483506 CSNK1G2-AS1Q8NCQ2 148 aa13.12□□□□□ -0.31
HDAC6-225ENST00000483506 ASB13Q8WXK3 278 aa13.12□□□□□ -0.31
HDAC6-225ENST00000483506 RARRES2Q99969 163 aa13.12□□□□□ -0.31
HDAC6-225ENST00000483506 MED28Q9H204 178 aa13.12□□□□□ -0.31
HDAC6-225ENST00000483506 RPRMQ9NS64 109 aa13.12□□□□□ -0.31
HDAC6-225ENST00000483506 HSPB11Q9Y547 144 aa13.12□□□□□ -0.31
HDAC6-225ENST00000483506 A0A0J9YWU9 116 aa13.11□□□□□ -0.31
HDAC6-225ENST00000483506 A0A0J9YX75 114 aa13.11□□□□□ -0.31
HDAC6-225ENST00000483506 RPL12P30050 165 aaKnown RBP13.11□□□□□ -0.31
HDAC6-225ENST00000483506 DEFB1P60022 68 aa13.11□□□□□ -0.31
HDAC6-225ENST00000483506 NUTF2P61970 127 aaKnown RBP13.11□□□□□ -0.31
HDAC6-225ENST00000483506 CLINT1Q14677 625 aa13.11□□□□□ -0.31
HDAC6-225ENST00000483506 BPIFA4PQ86YQ2 179 aa13.11□□□□□ -0.31
HDAC6-225ENST00000483506 OR11H2Q8NH07 326 aa13.11□□□□□ -0.31
HDAC6-225ENST00000483506 ATP5SQ99766 215 aa13.11□□□□□ -0.31
HDAC6-225ENST00000483506 WDR61Q9GZS3 305 aaKnown RBP13.11□□□□□ -0.31
HDAC6-225ENST00000483506 C11orf68Q9H3H3 251 aaKnown RBP13.11□□□□□ -0.31
HDAC6-225ENST00000483506 DYNC2H1Q8NCM8 4307 aaKnown RBP13.11□□□□□ -0.31
HDAC6-225ENST00000483506 ZNF705EA8MWA4 302 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-225ENST00000483506 THAP6Q8TBB0 222 aa13.1□□□□□ -0.31
HDAC6-225ENST00000483506 C1QTNF4Q9BXJ3 329 aa13.1□□□□□ -0.31
HDAC6-225ENST00000483506 TENM2Q9NT68 2774 aa13.09□□□□□ -0.31
HDAC6-225ENST00000483506 IGLC2P0DOY2 106 aa13.09□□□□□ -0.31
HDAC6-225ENST00000483506 EBLN2Q6P2I7 272 aa13.09□□□□□ -0.31
HDAC6-225ENST00000483506 LCN15Q6UWW0 184 aa13.09□□□□□ -0.31
HDAC6-225ENST00000483506 ZNF709Q8N972 641 aa13.09□□□□□ -0.31
HDAC6-225ENST00000483506 KCNIP2Q9NS61 270 aa13.09□□□□□ -0.31
HDAC6-225ENST00000483506 F6UB75 175 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms