RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 TMEM182Q6ZP80 229 aaPredicted RBP10.13□□□□□ -0.79
VARS-225ENST00000482996 PPP1R1CQ8WVI7 109 aa10.13□□□□□ -0.79
VARS-225ENST00000482996 HYLS1Q96M11 299 aa10.13□□□□□ -0.79
VARS-225ENST00000482996 GPR82Q96P67 336 aa10.13□□□□□ -0.79
VARS-225ENST00000482996 GGACTQ9BVM4 153 aa10.13□□□□□ -0.79
VARS-225ENST00000482996 C1QTNF4Q9BXJ3 329 aa10.13□□□□□ -0.79
VARS-225ENST00000482996 SLC25A32Q9H2D1 315 aa10.13□□□□□ -0.79
VARS-225ENST00000482996 HIGD1AQ9Y241 93 aa10.13□□□□□ -0.79
VARS-225ENST00000482996 HLA-DRB4X5D2U9 266 aa10.13□□□□□ -0.79
VARS-225ENST00000482996 PLECQ15149 4684 aaKnown RBP10.12□□□□□ -0.79
VARS-225ENST00000482996 FXYD6-FXYD2A0A087WZ82 144 aa10.12□□□□□ -0.79
VARS-225ENST00000482996 H3BMM0 161 aa10.12□□□□□ -0.79
VARS-225ENST00000482996 K7EPK0 472 aa10.12□□□□□ -0.79
VARS-225ENST00000482996 HYPMO75409 117 aa10.12□□□□□ -0.79
VARS-225ENST00000482996 DEDDO75618 318 aa10.12□□□□□ -0.79
VARS-225ENST00000482996 C1QBP02746 253 aa10.12□□□□□ -0.79
VARS-225ENST00000482996 LINC00869P0C866 280 aa10.12□□□□□ -0.79
VARS-225ENST00000482996 C16orf92Q96LL3 132 aa10.12□□□□□ -0.79
VARS-225ENST00000482996 RSG1Q9BU20 258 aa10.12□□□□□ -0.79
VARS-225ENST00000482996 MFFQ9GZY8 342 aa10.12□□□□□ -0.79
VARS-225ENST00000482996 DOK5Q9P104 306 aa10.12□□□□□ -0.79
VARS-225ENST00000482996 BOLA2-SMG1P6H3BVE0 249 aa10.11□□□□□ -0.79
VARS-225ENST00000482996 SOCS3O14543 225 aa10.11□□□□□ -0.79
VARS-225ENST00000482996 OR5G3P0C626 314 aa10.11□□□□□ -0.79
VARS-225ENST00000482996 CAV2P51636 162 aa10.11□□□□□ -0.79
VARS-225ENST00000482996 PLP1P60201 277 aa10.11□□□□□ -0.79
VARS-225ENST00000482996 SPATA31B1PQ5VZV4 182 aa10.11□□□□□ -0.79
VARS-225ENST00000482996 CEMP1Q6PRD7 247 aaPredicted RBP10.11□□□□□ -0.79
VARS-225ENST00000482996 FOXI2Q6ZQN5 318 aa10.11□□□□□ -0.79
VARS-225ENST00000482996 SLC25A39Q9BZJ4 359 aaPredicted RBP10.11□□□□□ -0.79
VARS-225ENST00000482996 RNF24Q9Y225 148 aa10.11□□□□□ -0.79
VARS-225ENST00000482996 KLK5Q9Y337 293 aaPredicted RBP10.11□□□□□ -0.79
VARS-225ENST00000482996 DNAH1Q9P2D7 4330 aa10.11□□□□□ -0.79
VARS-225ENST00000482996 ALMS1Q8TCU4 4167 aa10.11□□□□□ -0.79
VARS-225ENST00000482996 SMLR1H3BR10 107 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 H3BRN7 92 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 MPC2O95563 127 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 MIFP14174 115 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 RPL7P18124 248 aaKnown RBP10.1□□□□□ -0.79
VARS-225ENST00000482996 SLC38A11Q08AI6 406 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 ARL16Q0P5N6 197 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 RAB32Q13637 225 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 PXDC1Q5TGL8 231 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 EBLN2Q6P2I7 272 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 ZNF546Q86UE3 836 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 INO80EQ8NBZ0 244 aaPredicted RBP10.1□□□□□ -0.79
VARS-225ENST00000482996 C11orf45Q8TAV5 145 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 SHANK2-AS3Q9BTD1 123 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 SCRT1Q9BWW7 348 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 ARL6Q9H0F7 186 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 SAV1Q9H4B6 383 aaPredicted RBP10.1□□□□□ -0.79
VARS-225ENST00000482996 RPRMQ9NS64 109 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 CLEC5AQ9NY25 188 aa10.1□□□□□ -0.79
VARS-225ENST00000482996 ZNF705EA8MWA4 302 aaPredicted RBP10.09□□□□□ -0.79
VARS-225ENST00000482996 DEFB4AO15263 64 aa10.09□□□□□ -0.79
VARS-225ENST00000482996 CD300CQ08708 224 aa10.09□□□□□ -0.79
VARS-225ENST00000482996 RAB31Q13636 194 aa10.09□□□□□ -0.79
VARS-225ENST00000482996 Q8NAQ8 132 aa10.09□□□□□ -0.79
VARS-225ENST00000482996 PHLDA1Q8WV24 401 aaPredicted RBP10.09□□□□□ -0.79
VARS-225ENST00000482996 XCL2Q9UBD3 114 aa10.09□□□□□ -0.79
VARS-225ENST00000482996 RYR2Q92736 4967 aa10.09□□□□□ -0.79
VARS-225ENST00000482996 IGHV4-28A0A0C4DH34 117 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 FAM24AA6NFZ4 105 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 E5RGE8 158 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 AGPAT2O15120 278 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 ARPC5O15511 151 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 CST7O76096 145 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 IGKV3-20P01619 116 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 DEFB1P60022 68 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 NANOS2P60321 138 aaKnown RBP10.08□□□□□ -0.8
VARS-225ENST00000482996 GDF5OSQ5U4N7 250 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 STX12Q86Y82 276 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 CSNK1G2-AS1Q8NCQ2 148 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 OR4B1Q8NGF8 309 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 CLUHP3Q96NS8 147 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 C11orf1Q9H5F2 150 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 UQCC1Q9NVA1 299 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 MBD2Q9UBB5 411 aa10.08□□□□□ -0.8
VARS-225ENST00000482996 SULT1A1P50225 295 aa10.07□□□□□ -0.8
VARS-225ENST00000482996 HBG1P69891 147 aa10.07□□□□□ -0.8
VARS-225ENST00000482996 HBG2P69892 147 aa10.07□□□□□ -0.8
VARS-225ENST00000482996 IL15RAQ13261 267 aa10.07□□□□□ -0.8
VARS-225ENST00000482996 UHRF2Q96PU4 802 aa10.07□□□□□ -0.8
VARS-225ENST00000482996 ARV1Q9H2C2 271 aa10.07□□□□□ -0.8
VARS-225ENST00000482996 LYRM2Q9NU23 88 aaPredicted RBP10.07□□□□□ -0.8
VARS-225ENST00000482996 X6R8D5 127 aa10.07□□□□□ -0.8
VARS-225ENST00000482996 A0A0J9YX75 114 aa10.06□□□□□ -0.8
VARS-225ENST00000482996 COX7A2P2O60397 106 aa10.06□□□□□ -0.8
VARS-225ENST00000482996 RBMY1A1P0DJD3 496 aaKnown RBP10.06□□□□□ -0.8
VARS-225ENST00000482996 RBMY1CP0DJD4 496 aa10.06□□□□□ -0.8
VARS-225ENST00000482996 S100A11P31949 105 aa10.06□□□□□ -0.8
VARS-225ENST00000482996 CAMLGP49069 296 aa10.06□□□□□ -0.8
VARS-225ENST00000482996 PSG9Q00887 426 aa10.06□□□□□ -0.8
VARS-225ENST00000482996 RBMY1FQ15415 496 aaKnown RBP10.06□□□□□ -0.8
VARS-225ENST00000482996 FAM78BQ5VT40 261 aa10.06□□□□□ -0.8
VARS-225ENST00000482996 PATE2Q6UY27 113 aa10.06□□□□□ -0.8
VARS-225ENST00000482996 LRRC20Q8TCA0 184 aa10.06□□□□□ -0.8
VARS-225ENST00000482996 C20orf173Q96LM9 149 aa10.06□□□□□ -0.8
VARS-225ENST00000482996 C17orf77Q96MU5 243 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms