RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 ATPIF1Q9UII2 106 aa2.32□□□□□ -2.04
SHQ1-208ENST00000482785 LSM5Q9Y4Y9 91 aaKnown RBP2.32□□□□□ -2.04
SHQ1-208ENST00000482785 ZNF706Q9Y5V0 76 aaPredicted RBP2.32□□□□□ -2.04
SHQ1-208ENST00000482785 DEFB131BA0A096LNP1 70 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 A0A096LPI6 279 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 TMED7-TICAM2A0A0A6YYA0 188 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 IGHV1-3A0A0C4DH29 117 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 GMNCA6NCL1 334 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 CLDN24A6NM45 220 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 LY6LH3BQJ8 138 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 RGS5O15539 181 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 HLA-DQB1P01920 261 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 HBZP02008 142 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 C1QCP02747 245 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 SEC11BP0C7V7 166 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 GTF2F2P13984 249 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 GPX2P18283 190 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 PPIBP23284 216 aaKnown RBP2.31□□□□□ -2.04
SHQ1-208ENST00000482785 DDTP30046 118 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 INPP1P49441 399 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 GDI2P50395 445 aaKnown RBP2.31□□□□□ -2.04
SHQ1-208ENST00000482785 CMC4P56277 68 aaPredicted RBP2.31□□□□□ -2.04
SHQ1-208ENST00000482785 RAB2AP61019 212 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 RANP62826 216 aaKnown RBP2.31□□□□□ -2.04
SHQ1-208ENST00000482785 MT1HP80294 61 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 HPCAP84074 193 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 BTN1A1Q13410 526 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 SPCS2Q15005 226 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 LIN52Q52LA3 116 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 MRPL2Q5T653 305 aaKnown RBP2.31□□□□□ -2.04
SHQ1-208ENST00000482785 C1orf195Q5TG92 126 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 C5orf46Q6UWT4 87 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 FAM19A3Q7Z5A8 133 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 SLC51BQ86UW2 128 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 NIT1Q86X76 327 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 STX12Q86Y82 276 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 OR51H1Q8NH63 302 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 ZNRF2Q8NHG8 242 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 MFSD8Q8NHS3 518 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 ZNF563Q8TA94 476 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 ASB17Q8WXJ9 295 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 OR52B2Q96RD2 323 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 TPT1P8Q9HAU6 139 aa2.31□□□□□ -2.04
SHQ1-208ENST00000482785 SAMHD1Q9Y3Z3 626 aaKnown RBP2.31□□□□□ -2.04
SHQ1-208ENST00000482785 IGKV3D-20A0A0C4DH25 116 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 PRORSD1PA6NEY8 169 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 F5H5P2 479 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 RPL36A-HNRNPH2H7BZ11 118 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 ISLRO14498 428 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 RBFOX2O43251 390 aaKnown RBP eCLIP2.3□□□□□ -2.04
SHQ1-208ENST00000482785 OR2T1O43869 369 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 EDF1O60869 148 aaKnown RBP2.3□□□□□ -2.04
SHQ1-208ENST00000482785 CXorf1O96002 111 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 ATP5G1P05496 136 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 CXCL3P19876 107 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 ALOX5APP20292 161 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 RAB5BP61020 215 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 B2MP61769 119 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 COPZ1P61923 177 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 CDK6Q00534 326 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 C1orf140Q5VVS0 124 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 DHRS4L2Q6PKH6 230 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 Q6ZRN7 208 aaPredicted RBP2.3□□□□□ -2.04
SHQ1-208ENST00000482785 NAA40Q86UY6 237 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 MSRB3Q8IXL7 192 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 MKXQ8IYA7 352 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 CYB561D1Q8N8Q1 229 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 OR10G2Q8NGC3 310 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 OR52L1Q8NGH7 329 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 OR1P1Q8NH06 330 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 GPR82Q96P67 336 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 SDHCQ99643 169 aaPredicted RBP2.3□□□□□ -2.04
SHQ1-208ENST00000482785 LINC00470Q9BZP3 86 aa2.3□□□□□ -2.04
SHQ1-208ENST00000482785 EIF5A2Q9GZV4 153 aaKnown RBP2.3□□□□□ -2.04
SHQ1-208ENST00000482785 CACYBPQ9HB71 228 aaKnown RBP2.3□□□□□ -2.04
SHQ1-208ENST00000482785 ZNF443Q9Y2A4 671 aaPredicted RBP2.3□□□□□ -2.04
SHQ1-208ENST00000482785 YTHDF2Q9Y5A9 579 aaKnown RBP2.3□□□□□ -2.04
SHQ1-208ENST00000482785 IGKV1D-42A0A075B6H8 117 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 IGLV4-69A0A075B6H9 119 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 TRAV36DV7A0A075B6V5 113 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 A0A087WUJ7 227 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 A0A0G2JND7 137 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 EVPLLA8MZ36 301 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 C5orf58C9J3I9 102 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 OR7C2O60412 319 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 TPST1O60507 370 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 CXCL2P19875 107 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 GZMMP51124 257 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 DYNLT3P51808 116 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 KRTAP10-8P60410 259 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 GNGT1P63211 74 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 ELF3P78545 371 aaPredicted RBP2.29□□□□□ -2.04
SHQ1-208ENST00000482785 RUNX1Q01196 453 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 FABP5Q01469 135 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 RSU1Q15404 277 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 TMEM241Q24JQ0 296 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 Q5W150 140 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 FAM104BQ5XKR9 115 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 ELP2Q6IA86 826 aa2.29□□□□□ -2.04
SHQ1-208ENST00000482785 OR10K2Q6IF99 312 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms