RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 PRR20DP86480 221 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 PRR20BP86481 221 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 PRR20AP86496 221 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 OPCMLQ14982 345 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 ZNF124Q15973 351 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 PSMG4Q5JS54 123 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 LEMD1Q68G75 181 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 PATE2Q6UY27 113 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 STHQ8IWL8 128 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 OR1L4Q8NGR5 311 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 SCRT1Q9BWW7 348 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 HSPB11Q9Y547 144 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 PSMB3P49720 205 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 B2MP61769 119 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 CLINT1Q14677 625 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 C10orf113Q5VZT2 155 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 MIC13Q5XKP0 118 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 Q6ZWC4 215 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 LINC00305Q7Z4B0 112 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 WWC2-AS2Q96NR7 200 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 UHRF2Q96PU4 802 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 PFDN5Q99471 154 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 RSG1Q9BU20 258 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 NPCDR1Q9BY65 106 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 DNAJC4Q9NNZ3 241 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 KCNIP2Q9NS61 270 aa12.25□□□□□ -0.45
HMGN1-214ENST00000482733 ISLRO14498 428 aa12.24□□□□□ -0.45
HMGN1-214ENST00000482733 SOCS3O14543 225 aa12.24□□□□□ -0.45
HMGN1-214ENST00000482733 ATF4P18848 351 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-214ENST00000482733 TMEM37Q8WXS4 190 aa12.24□□□□□ -0.45
HMGN1-214ENST00000482733 ATP5SQ99766 215 aa12.24□□□□□ -0.45
HMGN1-214ENST00000482733 WDR61Q9GZS3 305 aaKnown RBP12.24□□□□□ -0.45
HMGN1-214ENST00000482733 CSTL1Q9H114 145 aa12.24□□□□□ -0.45
HMGN1-214ENST00000482733 SLC39A9Q9NUM3 307 aa12.24□□□□□ -0.45
HMGN1-214ENST00000482733 PXMP4Q9Y6I8 212 aa12.24□□□□□ -0.45
HMGN1-214ENST00000482733 ZNF709Q8N972 641 aa12.23□□□□□ -0.45
HMGN1-214ENST00000482733 C16orf92Q96LL3 132 aa12.23□□□□□ -0.45
HMGN1-214ENST00000482733 TP53TG1Q9Y2A0 90 aa12.23□□□□□ -0.45
HMGN1-214ENST00000482733 C17orf112F2Z3M2 114 aa12.22□□□□□ -0.45
HMGN1-214ENST00000482733 IFNA5P01569 189 aa12.22□□□□□ -0.45
HMGN1-214ENST00000482733 ACTL10Q5JWF8 245 aa12.22□□□□□ -0.45
HMGN1-214ENST00000482733 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.22□□□□□ -0.45
HMGN1-214ENST00000482733 TRPT1Q86TN4 253 aaKnown RBP12.22□□□□□ -0.45
HMGN1-214ENST00000482733 GATAD1Q8WUU5 269 aa12.22□□□□□ -0.45
HMGN1-214ENST00000482733 LINC00052Q96N35 136 aa12.22□□□□□ -0.45
HMGN1-214ENST00000482733 A0A087X0K7 114 aa12.21□□□□□ -0.45
HMGN1-214ENST00000482733 KNCNA6PVL3 124 aa12.21□□□□□ -0.45
HMGN1-214ENST00000482733 SPP1P10451 314 aa12.21□□□□□ -0.45
HMGN1-214ENST00000482733 TMEM41BQ5BJD5 291 aa12.21□□□□□ -0.45
HMGN1-214ENST00000482733 MORN3Q6PF18 240 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-214ENST00000482733 BPIFA4PQ86YQ2 179 aa12.21□□□□□ -0.45
HMGN1-214ENST00000482733 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.45
HMGN1-214ENST00000482733 RETNQ9HD89 108 aa12.21□□□□□ -0.45
HMGN1-214ENST00000482733 SPRY2O43597 315 aa12.2□□□□□ -0.46
HMGN1-214ENST00000482733 SPATA31B1PQ5VZV4 182 aa12.2□□□□□ -0.46
HMGN1-214ENST00000482733 FOXI2Q6ZQN5 318 aa12.2□□□□□ -0.46
HMGN1-214ENST00000482733 C17orf77Q96MU5 243 aa12.2□□□□□ -0.46
HMGN1-214ENST00000482733 AQP10Q96PS8 301 aa12.2□□□□□ -0.46
HMGN1-214ENST00000482733 OVOL2Q9BRP0 275 aa12.2□□□□□ -0.46
HMGN1-214ENST00000482733 PARD6GQ9BYG4 376 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-214ENST00000482733 SMIM3Q9BZL3 60 aa12.2□□□□□ -0.46
HMGN1-214ENST00000482733 RPRMQ9NS64 109 aa12.2□□□□□ -0.46
HMGN1-214ENST00000482733 MRPS12O15235 138 aaKnown RBP12.19□□□□□ -0.46
HMGN1-214ENST00000482733 CXCL2P19875 107 aa12.19□□□□□ -0.46
HMGN1-214ENST00000482733 DEFB135Q30KP9 77 aa12.19□□□□□ -0.46
HMGN1-214ENST00000482733 OR2T35Q8NGX2 323 aa12.19□□□□□ -0.46
HMGN1-214ENST00000482733 RNF183Q96D59 192 aa12.19□□□□□ -0.46
HMGN1-214ENST00000482733 NBEAL2Q6ZNJ1 2754 aa12.18□□□□□ -0.46
HMGN1-214ENST00000482733 STAB2Q8WWQ8 2551 aa12.18□□□□□ -0.46
HMGN1-214ENST00000482733 H3BMM0 161 aa12.18□□□□□ -0.46
HMGN1-214ENST00000482733 CA1P00915 261 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-214ENST00000482733 HLA-DRB4P13762 266 aa12.18□□□□□ -0.46
HMGN1-214ENST00000482733 NUTF2P61970 127 aaKnown RBP12.18□□□□□ -0.46
HMGN1-214ENST00000482733 EBLN2Q6P2I7 272 aa12.18□□□□□ -0.46
HMGN1-214ENST00000482733 INO80EQ8NBZ0 244 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-214ENST00000482733 LRRC20Q8TCA0 184 aa12.18□□□□□ -0.46
HMGN1-214ENST00000482733 SAV1Q9H4B6 383 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-214ENST00000482733 HLA-DRB4X5D2U9 266 aa12.18□□□□□ -0.46
HMGN1-214ENST00000482733 ZNF266Q14584 549 aa12.17□□□□□ -0.46
HMGN1-214ENST00000482733 Q5BKY6 102 aa12.17□□□□□ -0.46
HMGN1-214ENST00000482733 MORN5Q5VZ52 161 aa12.17□□□□□ -0.46
HMGN1-214ENST00000482733 LCN15Q6UWW0 184 aa12.17□□□□□ -0.46
HMGN1-214ENST00000482733 CLUHP3Q96NS8 147 aa12.17□□□□□ -0.46
HMGN1-214ENST00000482733 EDA2RQ9HAV5 297 aa12.17□□□□□ -0.46
HMGN1-214ENST00000482733 TRAV8-2A0A0B4J237 113 aa12.16□□□□□ -0.46
HMGN1-214ENST00000482733 GUK1Q16774 197 aa12.16□□□□□ -0.46
HMGN1-214ENST00000482733 FAM78BQ5VT40 261 aa12.16□□□□□ -0.46
HMGN1-214ENST00000482733 C20orf173Q96LM9 149 aa12.16□□□□□ -0.46
HMGN1-214ENST00000482733 SLC50A1Q9BRV3 221 aa12.16□□□□□ -0.46
HMGN1-214ENST00000482733 MRPL32Q9BYC8 188 aaKnown RBP12.16□□□□□ -0.46
HMGN1-214ENST00000482733 HRH4Q9H3N8 390 aa12.16□□□□□ -0.46
HMGN1-214ENST00000482733 WFDC1Q9HC57 220 aa12.16□□□□□ -0.46
HMGN1-214ENST00000482733 TMEM14CQ9P0S9 112 aa12.16□□□□□ -0.46
HMGN1-214ENST00000482733 FXYD6-FXYD2A0A087WZ82 144 aa12.15□□□□□ -0.46
HMGN1-214ENST00000482733 TRAV5A0A0B4J249 113 aa12.15□□□□□ -0.46
HMGN1-214ENST00000482733 IGLC2P0DOY2 106 aa12.15□□□□□ -0.46
HMGN1-214ENST00000482733 GCSAMLQ5JQS6 135 aa12.15□□□□□ -0.46
HMGN1-214ENST00000482733 C1QTNF4Q9BXJ3 329 aa12.15□□□□□ -0.46
HMGN1-214ENST00000482733 CLEC5AQ9NY25 188 aa12.15□□□□□ -0.46
HMGN1-214ENST00000482733 TENM3Q9P273 2699 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms