RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 FXYD7P58549 80 aa12.05□□□□□ -0.48
VAMP4-204ENST00000482519 SAMD13Q5VXD3 122 aa12.05□□□□□ -0.48
VAMP4-204ENST00000482519 EBLN2Q6P2I7 272 aa12.05□□□□□ -0.48
VAMP4-204ENST00000482519 FOXI2Q6ZQN5 318 aa12.05□□□□□ -0.48
VAMP4-204ENST00000482519 ZNF546Q86UE3 836 aa12.05□□□□□ -0.48
VAMP4-204ENST00000482519 SAV1Q9H4B6 383 aaPredicted RBP12.05□□□□□ -0.48
VAMP4-204ENST00000482519 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
VAMP4-204ENST00000482519 HLA-DRB4X5D2U9 266 aa12.05□□□□□ -0.48
VAMP4-204ENST00000482519 RYR2Q92736 4967 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 NUPR2A6NF83 97 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 F6UB75 175 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 NANOS2P60321 138 aaKnown RBP12.04□□□□□ -0.48
VAMP4-204ENST00000482519 RAB31Q13636 194 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 IGFL4Q6B9Z1 124 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 S100A7AQ86SG5 101 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 C11orf45Q8TAV5 145 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 C20orf173Q96LM9 149 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 MGST2Q99735 147 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 C1QTNF4Q9BXJ3 329 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 C11orf68Q9H3H3 251 aaKnown RBP12.04□□□□□ -0.48
VAMP4-204ENST00000482519 C11orf1Q9H5F2 150 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 RPRMQ9NS64 109 aa12.04□□□□□ -0.48
VAMP4-204ENST00000482519 LYRM2Q9NU23 88 aaPredicted RBP12.04□□□□□ -0.48
VAMP4-204ENST00000482519 LYSTQ99698 3801 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 IGHV4-28A0A0C4DH34 117 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 IGSF23A1L1A6 192 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 PRAF2O60831 178 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 RPL7P18124 248 aaKnown RBP12.03□□□□□ -0.48
VAMP4-204ENST00000482519 SULT1A1P50225 295 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 PLP1P60201 277 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 IL15RAQ13261 267 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 CEMP1Q6PRD7 247 aaPredicted RBP12.03□□□□□ -0.48
VAMP4-204ENST00000482519 PATE2Q6UY27 113 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 STX12Q86Y82 276 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 CSNK1G2-AS1Q8NCQ2 148 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 C17orf77Q96MU5 243 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 ARV1Q9H2C2 271 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 UQCC1Q9NVA1 299 aa12.03□□□□□ -0.48
VAMP4-204ENST00000482519 COX7A2P2O60397 106 aa12.02□□□□□ -0.49
VAMP4-204ENST00000482519 CAMLGP49069 296 aa12.02□□□□□ -0.49
VAMP4-204ENST00000482519 LRRC37A5PQ49AS3 106 aa12.02□□□□□ -0.49
VAMP4-204ENST00000482519 FAM78BQ5VT40 261 aa12.02□□□□□ -0.49
VAMP4-204ENST00000482519 LINC00305Q7Z4B0 112 aa12.02□□□□□ -0.49
VAMP4-204ENST00000482519 RNF182Q8N6D2 247 aa12.02□□□□□ -0.49
VAMP4-204ENST00000482519 TMEM252Q8N6L7 170 aa12.02□□□□□ -0.49
VAMP4-204ENST00000482519 Q8NAQ8 132 aa12.02□□□□□ -0.49
VAMP4-204ENST00000482519 PHLDA1Q8WV24 401 aaPredicted RBP12.02□□□□□ -0.49
VAMP4-204ENST00000482519 X6R8D5 127 aa12.02□□□□□ -0.49
VAMP4-204ENST00000482519 IGHV3OR16-12A0A075B7B8 117 aa12.01□□□□□ -0.49
VAMP4-204ENST00000482519 UBE2L5PA0A1B0GUS4 154 aa12.01□□□□□ -0.49
VAMP4-204ENST00000482519 ZNF705EA8MWA4 302 aaPredicted RBP12.01□□□□□ -0.49
VAMP4-204ENST00000482519 SSNA1O43805 119 aa12.01□□□□□ -0.49
VAMP4-204ENST00000482519 RBMY1A1P0DJD3 496 aaKnown RBP12.01□□□□□ -0.49
VAMP4-204ENST00000482519 RBMY1CP0DJD4 496 aa12.01□□□□□ -0.49
VAMP4-204ENST00000482519 MIFP14174 115 aa12.01□□□□□ -0.49
VAMP4-204ENST00000482519 S100A11P31949 105 aa12.01□□□□□ -0.49
VAMP4-204ENST00000482519 HBG1P69891 147 aa12.01□□□□□ -0.49
VAMP4-204ENST00000482519 HBG2P69892 147 aa12.01□□□□□ -0.49
VAMP4-204ENST00000482519 RBMY1FQ15415 496 aaKnown RBP12.01□□□□□ -0.49
VAMP4-204ENST00000482519 PXDC1Q5TGL8 231 aa12.01□□□□□ -0.49
VAMP4-204ENST00000482519 LRRC20Q8TCA0 184 aa12.01□□□□□ -0.49
VAMP4-204ENST00000482519 MARVELD1Q9BSK0 173 aa12.01□□□□□ -0.49
VAMP4-204ENST00000482519 MFFQ9GZY8 342 aa12.01□□□□□ -0.49
VAMP4-204ENST00000482519 KLK5Q9Y337 293 aaPredicted RBP12.01□□□□□ -0.49
VAMP4-204ENST00000482519 A0A0J9YX75 114 aa12□□□□□ -0.49
VAMP4-204ENST00000482519 RLN2P04090 185 aa12□□□□□ -0.49
VAMP4-204ENST00000482519 SNRPCP09234 159 aaKnown RBP12□□□□□ -0.49
VAMP4-204ENST00000482519 BAXQ07812 192 aa12□□□□□ -0.49
VAMP4-204ENST00000482519 C10orf113Q5VZT2 155 aa12□□□□□ -0.49
VAMP4-204ENST00000482519 SPATA31B1PQ5VZV4 182 aa12□□□□□ -0.49
VAMP4-204ENST00000482519 MIC13Q5XKP0 118 aa12□□□□□ -0.49
VAMP4-204ENST00000482519 Q6ZRG5 221 aa12□□□□□ -0.49
VAMP4-204ENST00000482519 SLC35B3Q9H1N7 401 aa12□□□□□ -0.49
VAMP4-204ENST00000482519 SACSQ9NZJ4 4579 aa11.99□□□□□ -0.49
VAMP4-204ENST00000482519 TRAV8-2A0A0B4J237 113 aa11.99□□□□□ -0.49
VAMP4-204ENST00000482519 ZNF705DP0CH99 300 aaPredicted RBP11.99□□□□□ -0.49
VAMP4-204ENST00000482519 ZNF705BP0CI00 300 aaPredicted RBP11.99□□□□□ -0.49
VAMP4-204ENST00000482519 PSG9Q00887 426 aa11.99□□□□□ -0.49
VAMP4-204ENST00000482519 ZNF738Q8NE65 137 aa11.99□□□□□ -0.49
VAMP4-204ENST00000482519 TMEM37Q8WXS4 190 aa11.99□□□□□ -0.49
VAMP4-204ENST00000482519 NMES1Q9C002 83 aa11.99□□□□□ -0.49
VAMP4-204ENST00000482519 RNF24Q9Y225 148 aa11.99□□□□□ -0.49
VAMP4-204ENST00000482519 WDR83OSQ9Y284 106 aa11.99□□□□□ -0.49
VAMP4-204ENST00000482519 ELOA3CA0A087WX78 387 aaPredicted RBP11.98□□□□□ -0.49
VAMP4-204ENST00000482519 PRB4P10163 310 aaPredicted RBP11.98□□□□□ -0.49
VAMP4-204ENST00000482519 FGF7P21781 194 aa11.98□□□□□ -0.49
VAMP4-204ENST00000482519 CYCSP99999 105 aaKnown RBP11.98□□□□□ -0.49
VAMP4-204ENST00000482519 VWC2Q2TAL6 325 aa11.98□□□□□ -0.49
VAMP4-204ENST00000482519 ZNF709Q8N972 641 aa11.98□□□□□ -0.49
VAMP4-204ENST00000482519 DNAJC4Q9NNZ3 241 aa11.98□□□□□ -0.49
VAMP4-204ENST00000482519 OR5AC2Q9NZP5 309 aa11.98□□□□□ -0.49
VAMP4-204ENST00000482519 E5RGE8 158 aa11.97□□□□□ -0.49
VAMP4-204ENST00000482519 HLA-DMBP28068 263 aa11.97□□□□□ -0.49
VAMP4-204ENST00000482519 H2BFSP57053 126 aa11.97□□□□□ -0.49
VAMP4-204ENST00000482519 NHLH2Q02577 135 aa11.97□□□□□ -0.49
VAMP4-204ENST00000482519 ATP6V1FQ16864 119 aa11.97□□□□□ -0.49
VAMP4-204ENST00000482519 MORN5Q5VZ52 161 aa11.97□□□□□ -0.49
VAMP4-204ENST00000482519 CLUHP3Q96NS8 147 aa11.97□□□□□ -0.49
VAMP4-204ENST00000482519 SLC25A31Q9H0C2 315 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms