RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 EBLN2Q6P2I7 272 aa8.64□□□□□ -1.03
HMGN1-213ENST00000482192 Q8NAQ8 132 aa8.64□□□□□ -1.03
HMGN1-213ENST00000482192 CLUHP3Q96NS8 147 aa8.64□□□□□ -1.03
HMGN1-213ENST00000482192 C11orf1Q9H5F2 150 aa8.64□□□□□ -1.03
HMGN1-213ENST00000482192 RPRMQ9NS64 109 aa8.64□□□□□ -1.03
HMGN1-213ENST00000482192 RNF24Q9Y225 148 aa8.64□□□□□ -1.03
HMGN1-213ENST00000482192 KLK5Q9Y337 293 aaPredicted RBP8.64□□□□□ -1.03
HMGN1-213ENST00000482192 IGHV4-28A0A0C4DH34 117 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 AGPAT2O15120 278 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 DEFB4AO15263 64 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 PRAF2O60831 178 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 CST7O76096 145 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 DEFA1P59665 94 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 DEFA3P59666 94 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 DEFB1P60022 68 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 IL15RAQ13261 267 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 RAB31Q13636 194 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 RAB32Q13637 225 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 NRARPQ7Z6K4 114 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 STX12Q86Y82 276 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 UHRF2Q96PU4 802 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 ARL6Q9H0F7 186 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 ARV1Q9H2C2 271 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 LYRM2Q9NU23 88 aaPredicted RBP8.63□□□□□ -1.03
HMGN1-213ENST00000482192 XCL2Q9UBD3 114 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 X6R8D5 127 aa8.63□□□□□ -1.03
HMGN1-213ENST00000482192 FAM24AA6NFZ4 105 aa8.62□□□□□ -1.03
HMGN1-213ENST00000482192 INMT-MINDY4F8WBC2 141 aa8.62□□□□□ -1.03
HMGN1-213ENST00000482192 IGKV3-20P01619 116 aa8.62□□□□□ -1.03
HMGN1-213ENST00000482192 SULT1A1P50225 295 aa8.62□□□□□ -1.03
HMGN1-213ENST00000482192 NANOS2P60321 138 aaKnown RBP8.62□□□□□ -1.03
HMGN1-213ENST00000482192 HBG1P69891 147 aa8.62□□□□□ -1.03
HMGN1-213ENST00000482192 HBG2P69892 147 aa8.62□□□□□ -1.03
HMGN1-213ENST00000482192 OR4B1Q8NGF8 309 aa8.62□□□□□ -1.03
HMGN1-213ENST00000482192 PHLDA1Q8WV24 401 aaPredicted RBP8.62□□□□□ -1.03
HMGN1-213ENST00000482192 C17orf77Q96MU5 243 aa8.62□□□□□ -1.03
HMGN1-213ENST00000482192 MGST2Q99735 147 aa8.62□□□□□ -1.03
HMGN1-213ENST00000482192 HRH4Q9H3N8 390 aa8.62□□□□□ -1.03
HMGN1-213ENST00000482192 UQCC1Q9NVA1 299 aa8.62□□□□□ -1.03
HMGN1-213ENST00000482192 A0A0J9YX75 114 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 IGSF23A1L1A6 192 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 F6UB75 175 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 COX7A2P2O60397 106 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 RBMY1A1P0DJD3 496 aaKnown RBP8.61□□□□□ -1.03
HMGN1-213ENST00000482192 RBMY1CP0DJD4 496 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 S100A11P31949 105 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 CAMLGP49069 296 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 FGL1Q08830 312 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 RBMY1FQ15415 496 aaKnown RBP8.61□□□□□ -1.03
HMGN1-213ENST00000482192 VWC2Q2TAL6 325 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 FAM78BQ5VT40 261 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 PATE2Q6UY27 113 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 TMEM252Q8N6L7 170 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 ZNF709Q8N972 641 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 C20orf173Q96LM9 149 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 MARVELD1Q9BSK0 173 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 WDR83OSQ9Y284 106 aa8.61□□□□□ -1.03
HMGN1-213ENST00000482192 RYR3Q15413 4870 aa8.6□□□□□ -1.03
HMGN1-213ENST00000482192 ELOA3CA0A087WX78 387 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-213ENST00000482192 A0A087X0K7 114 aa8.6□□□□□ -1.03
HMGN1-213ENST00000482192 TRAV8-2A0A0B4J237 113 aa8.6□□□□□ -1.03
HMGN1-213ENST00000482192 PSG9Q00887 426 aa8.6□□□□□ -1.03
HMGN1-213ENST00000482192 ZNF705AQ6ZN79 300 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-213ENST00000482192 Q6ZRG5 221 aa8.6□□□□□ -1.03
HMGN1-213ENST00000482192 LINC00305Q7Z4B0 112 aa8.6□□□□□ -1.03
HMGN1-213ENST00000482192 RNF182Q8N6D2 247 aa8.6□□□□□ -1.03
HMGN1-213ENST00000482192 NMES1Q9C002 83 aa8.6□□□□□ -1.03
HMGN1-213ENST00000482192 TENM2Q9NT68 2774 aa8.6□□□□□ -1.03
HMGN1-213ENST00000482192 UBE2L5PA0A1B0GUS4 154 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 ZNF705FA8MVS1 300 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-213ENST00000482192 SIX6O95475 246 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 RLN2P04090 185 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 ZNF705DP0CH99 300 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-213ENST00000482192 ZNF705BP0CI00 300 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-213ENST00000482192 FXYD7P58549 80 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 PRR20EP86478 221 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 PRR20CP86479 221 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 PRR20DP86480 221 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 PRR20BP86481 221 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 PRR20AP86496 221 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 CYCSP99999 105 aaKnown RBP8.59□□□□□ -1.03
HMGN1-213ENST00000482192 BAXQ07812 192 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 C10orf113Q5VZT2 155 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 IGFL4Q6B9Z1 124 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 LRRC20Q8TCA0 184 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 TMEM37Q8WXS4 190 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 LINC00476Q8WZB0 136 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 SLC35B3Q9H1N7 401 aa8.59□□□□□ -1.03
HMGN1-213ENST00000482192 DNAH7Q8WXX0 4024 aa8.58□□□□□ -1.04
HMGN1-213ENST00000482192 CSMD3Q7Z407 3707 aa8.58□□□□□ -1.04
HMGN1-213ENST00000482192 SMIM9A6NGZ8 99 aa8.58□□□□□ -1.04
HMGN1-213ENST00000482192 A8MTW9 85 aa8.58□□□□□ -1.04
HMGN1-213ENST00000482192 C11orf94C9JXX5 98 aa8.58□□□□□ -1.04
HMGN1-213ENST00000482192 E5RGE8 158 aa8.58□□□□□ -1.04
HMGN1-213ENST00000482192 MRPS12O15235 138 aaKnown RBP8.58□□□□□ -1.04
HMGN1-213ENST00000482192 DUSP14O95147 198 aaKnown RBP8.58□□□□□ -1.04
HMGN1-213ENST00000482192 CXCL2P19875 107 aa8.58□□□□□ -1.04
HMGN1-213ENST00000482192 CXCL3P19876 107 aa8.58□□□□□ -1.04
HMGN1-213ENST00000482192 CNN1P51911 297 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms