RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 INPP1P49441 399 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 KRTAP10-12P60413 245 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 ERVFC1-1P60608 527 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 YPEL3P61236 119 aaPredicted RBP4.46□□□□□ -1.7
VPS50-215ENST00000480943 DHRS2Q13268 280 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 PPP1R1AQ13522 171 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 USF2Q15853 346 aaPredicted RBP4.46□□□□□ -1.7
VPS50-215ENST00000480943 SPANXN2Q5MJ10 180 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 C16orf54Q6UWD8 224 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 CCDC190Q86UF4 302 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 STHQ8IWL8 128 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 CENPSQ8N2Z9 138 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 Q8WTZ3 238 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 SLC35E1Q96K37 410 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 PBDC1Q9BVG4 233 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 SRRQ9GZT4 340 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 CACFD1Q9UGQ2 172 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 PAIP2BQ9ULR5 123 aaKnown RBP4.46□□□□□ -1.7
VPS50-215ENST00000480943 U3KQ87 197 aa4.46□□□□□ -1.7
VPS50-215ENST00000480943 PIGBOS1A0A0B4J2F0 54 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 LINC00854A0A1B0GVQ3 168 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 NUPR2A6NF83 97 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 ZFP92A6NM28 416 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 KNCNA6PVL3 124 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 PITX3O75364 302 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 SFT2D2O95562 160 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 IGKV3-20P01619 116 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 RD3LP0DJH9 198 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 EIF2B2P49770 351 aaKnown RBP4.45□□□□□ -1.7
VPS50-215ENST00000480943 GAMTQ14353 236 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 BAK1Q16611 211 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 PSMG4Q5JS54 123 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 TRIQKQ629K1 86 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 SIGLEC15Q6ZMC9 328 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 LRTM2Q8N967 370 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 OR51G1Q8NGK1 321 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 OR11H2Q8NH07 326 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 DCANP1Q8TF63 244 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 GATAD1Q8WUU5 269 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 DEDD2Q8WXF8 326 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 RNF125Q96EQ8 232 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 RARRES2Q99969 163 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 SLC25A21Q9BQT8 299 aaPredicted RBP4.45□□□□□ -1.7
VPS50-215ENST00000480943 C1QTNF4Q9BXJ3 329 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 MAGT1Q9H0U3 335 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 BIRC6Q9NR09 4857 aa4.45□□□□□ -1.7
VPS50-215ENST00000480943 HELTA6NFD8 242 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 NAP1L6A6NFF2 107 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 FAM90A26D6RGX4 464 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 H3BP45 60 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 ZNF701M0R085 212 aaPredicted RBP4.44□□□□□ -1.7
VPS50-215ENST00000480943 WRBO00258 174 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 DEFB4AO15263 64 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 MED6O75586 246 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 ADAP1O75689 374 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 NDUFB6O95139 128 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 SLC25A6P12236 298 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 LYZP61626 148 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 RAB11AP62491 216 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 ZNF90Q03938 601 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 OR2F1Q13607 317 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 ACTL10Q5JWF8 245 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 GGNBP1Q5YKI7 109 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 TRPT1Q86TN4 253 aaKnown RBP4.44□□□□□ -1.7
VPS50-215ENST00000480943 NEXN-AS1Q8NBZ9 246 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 NRN1Q9NPD7 142 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 FLVCR2Q9UPI3 526 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 TMED3Q9Y3Q3 217 aa4.44□□□□□ -1.7
VPS50-215ENST00000480943 IGKV1D-37A0A075B6S9 117 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 IGLV5-52A0A0A0MRZ9 124 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 C9orf170A2RU37 121 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 BUB3O43684 328 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 SYNGR2O43760 224 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 LY6G6CO95867 125 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 SPP1P10451 314 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 C4BPBP20851 252 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 GPX4P36969 197 aaPredicted RBP4.43□□□□□ -1.7
VPS50-215ENST00000480943 NUP62P37198 522 aaPredicted RBP4.43□□□□□ -1.7
VPS50-215ENST00000480943 AP2S1P53680 142 aaPredicted RBP4.43□□□□□ -1.7
VPS50-215ENST00000480943 ATP5IP56385 69 aaPredicted RBP4.43□□□□□ -1.7
VPS50-215ENST00000480943 UBE2MP61081 183 aaKnown RBP4.43□□□□□ -1.7
VPS50-215ENST00000480943 SPANXN5Q5MJ07 72 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 OR8G2PQ6IF36 304 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 MORN3Q6PF18 240 aaPredicted RBP4.43□□□□□ -1.7
VPS50-215ENST00000480943 CEMP1Q6PRD7 247 aaPredicted RBP4.43□□□□□ -1.7
VPS50-215ENST00000480943 PPP1R14BQ96C90 147 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 CIB3Q96Q77 187 aaPredicted RBP4.43□□□□□ -1.7
VPS50-215ENST00000480943 SDHCQ99643 169 aaPredicted RBP4.43□□□□□ -1.7
VPS50-215ENST00000480943 ARPC5LQ9BPX5 153 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 CTDSP1Q9GZU7 261 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 C11orf68Q9H3H3 251 aaKnown RBP4.43□□□□□ -1.7
VPS50-215ENST00000480943 CLEC5AQ9NY25 188 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 FBXL17Q9UF56 701 aa4.43□□□□□ -1.7
VPS50-215ENST00000480943 IGKV1OR2-108A0A075B7D4 117 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 SMCO3A2RU48 225 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 CENPXA8MT69 81 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 PRSS46E5RG02 174 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 SSSCA1O60232 199 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 FABP1P07148 127 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 GIG44P09565 113 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms