RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, human

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-213	ENST00000480539		Q6ZNX1	250 aa		11.24	□□□□□ -0.61
ABCF3-213	ENST00000480539		Q6ZRG5	221 aa		11.24	□□□□□ -0.61
ABCF3-213	ENST00000480539	LINC00305	Q7Z4B0	112 aa		11.24	□□□□□ -0.61
ABCF3-213	ENST00000480539	TMEM37	Q8WXS4	190 aa		11.24	□□□□□ -0.61
ABCF3-213	ENST00000480539	FAM110A	Q9BQ89	295 aa		11.24	□□□□□ -0.61
ABCF3-213	ENST00000480539	RSG1	Q9BU20	258 aa		11.24	□□□□□ -0.61
ABCF3-213	ENST00000480539	TNFSF18	Q9UNG2	199 aa		11.24	□□□□□ -0.61
ABCF3-213	ENST00000480539	PSMG4	Q5JS54	123 aa		11.23	□□□□□ -0.61
ABCF3-213	ENST00000480539	S100A7A	Q86SG5	101 aa		11.23	□□□□□ -0.61
ABCF3-213	ENST00000480539	ZNF709	Q8N972	641 aa		11.23	□□□□□ -0.61
ABCF3-213	ENST00000480539	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.23	□□□□□ -0.61
ABCF3-213	ENST00000480539	OR1L4	Q8NGR5	311 aa		11.23	□□□□□ -0.61
ABCF3-213	ENST00000480539	GPR82	Q96P67	336 aa		11.23	□□□□□ -0.61
ABCF3-213	ENST00000480539	KCNIP2	Q9NS61	270 aa		11.23	□□□□□ -0.61
ABCF3-213	ENST00000480539	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.22	□□□□□ -0.61
ABCF3-213	ENST00000480539	C17orf112	F2Z3M2	114 aa		11.22	□□□□□ -0.61
ABCF3-213	ENST00000480539	ATF4	P18848	351 aa	Predicted RBP	11.22	□□□□□ -0.61
ABCF3-213	ENST00000480539	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.22	□□□□□ -0.61
ABCF3-213	ENST00000480539	SCGB1C1	Q8TD33	95 aa		11.22	□□□□□ -0.61
ABCF3-213	ENST00000480539	PFDN5	Q99471	154 aa		11.22	□□□□□ -0.61
ABCF3-213	ENST00000480539	SOCS3	O14543	225 aa		11.21	□□□□□ -0.61
ABCF3-213	ENST00000480539	ARPC5	O15511	151 aa		11.21	□□□□□ -0.61
ABCF3-213	ENST00000480539	RPL35A	P18077	110 aa	Known RBP	11.21	□□□□□ -0.61
ABCF3-213	ENST00000480539	RPL7	P18124	248 aa	Known RBP	11.21	□□□□□ -0.61
ABCF3-213	ENST00000480539	SNRPD3	P62318	126 aa	Known RBP	11.21	□□□□□ -0.61
ABCF3-213	ENST00000480539	HAGH	Q16775	308 aa		11.21	□□□□□ -0.61
ABCF3-213	ENST00000480539	C17orf77	Q96MU5	243 aa		11.21	□□□□□ -0.61
ABCF3-213	ENST00000480539	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.21	□□□□□ -0.61
ABCF3-213	ENST00000480539	DNAJC4	Q9NNZ3	241 aa		11.21	□□□□□ -0.61
ABCF3-213	ENST00000480539	RFNG	Q9Y644	331 aa		11.21	□□□□□ -0.61
ABCF3-213	ENST00000480539	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCF3-213	ENST00000480539	TRAV5	A0A0B4J249	113 aa		11.2	□□□□□ -0.62
ABCF3-213	ENST00000480539	KNCN	A6PVL3	124 aa		11.2	□□□□□ -0.62
ABCF3-213	ENST00000480539	SNRPC	P09234	159 aa	Known RBP	11.2	□□□□□ -0.62
ABCF3-213	ENST00000480539	CMC4	P56277	68 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCF3-213	ENST00000480539	FFAR4	Q5NUL3	377 aa		11.2	□□□□□ -0.62
ABCF3-213	ENST00000480539	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCF3-213	ENST00000480539	MRPS12	O15235	138 aa	Known RBP	11.19	□□□□□ -0.62
ABCF3-213	ENST00000480539	PSMB3	P49720	205 aa		11.19	□□□□□ -0.62
ABCF3-213	ENST00000480539	MEOX2	P50222	304 aa		11.19	□□□□□ -0.62
ABCF3-213	ENST00000480539	ZNF266	Q14584	549 aa		11.19	□□□□□ -0.62
ABCF3-213	ENST00000480539	SPATA31B1P	Q5VZV4	182 aa		11.19	□□□□□ -0.62
ABCF3-213	ENST00000480539	HSD17B11	Q8NBQ5	300 aa		11.19	□□□□□ -0.62
ABCF3-213	ENST00000480539	GATAD1	Q8WUU5	269 aa		11.19	□□□□□ -0.62
ABCF3-213	ENST00000480539	C16orf92	Q96LL3	132 aa		11.19	□□□□□ -0.62
ABCF3-213	ENST00000480539	LINC00052	Q96N35	136 aa		11.19	□□□□□ -0.62
ABCF3-213	ENST00000480539	RETN	Q9HD89	108 aa		11.19	□□□□□ -0.62
ABCF3-213	ENST00000480539		A0A087X0K7	114 aa		11.18	□□□□□ -0.62
ABCF3-213	ENST00000480539		H3BTX0	84 aa		11.18	□□□□□ -0.62
ABCF3-213	ENST00000480539	ID1	P41134	155 aa		11.18	□□□□□ -0.62
ABCF3-213	ENST00000480539	DEFB1	P60022	68 aa		11.18	□□□□□ -0.62
ABCF3-213	ENST00000480539	FAM78B	Q5VT40	261 aa		11.18	□□□□□ -0.62
ABCF3-213	ENST00000480539	BPIFA4P	Q86YQ2	179 aa		11.18	□□□□□ -0.62
ABCF3-213	ENST00000480539	OR11H4	Q8NGC9	324 aa		11.18	□□□□□ -0.62
ABCF3-213	ENST00000480539	RNF24	Q9Y225	148 aa		11.18	□□□□□ -0.62
ABCF3-213	ENST00000480539	ISLR	O14498	428 aa		11.17	□□□□□ -0.62
ABCF3-213	ENST00000480539	ACTL10	Q5JWF8	245 aa		11.17	□□□□□ -0.62
ABCF3-213	ENST00000480539	IGFL4	Q6B9Z1	124 aa		11.17	□□□□□ -0.62
ABCF3-213	ENST00000480539	RPL7L1	Q6DKI1	246 aa	Known RBP	11.17	□□□□□ -0.62
ABCF3-213	ENST00000480539	STH	Q8IWL8	128 aa		11.17	□□□□□ -0.62
ABCF3-213	ENST00000480539	RNF182	Q8N6D2	247 aa		11.17	□□□□□ -0.62
ABCF3-213	ENST00000480539	ST6GAL2	Q96JF0	529 aa		11.17	□□□□□ -0.62
ABCF3-213	ENST00000480539	C20orf173	Q96LM9	149 aa		11.17	□□□□□ -0.62
ABCF3-213	ENST00000480539	TM2D3	Q9BRN9	247 aa		11.17	□□□□□ -0.62
ABCF3-213	ENST00000480539	MFF	Q9GZY8	342 aa		11.17	□□□□□ -0.62
ABCF3-213	ENST00000480539	SEPSECS	Q9HD40	501 aa	Known RBP	11.17	□□□□□ -0.62
ABCF3-213	ENST00000480539	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.17	□□□□□ -0.62
ABCF3-213	ENST00000480539	TG	P01266	2768 aa		11.16	□□□□□ -0.62
ABCF3-213	ENST00000480539	NHLRC4	P0CG21	123 aa	Predicted RBP	11.16	□□□□□ -0.62
ABCF3-213	ENST00000480539	APOC4	P55056	127 aa		11.16	□□□□□ -0.62
ABCF3-213	ENST00000480539	SAMD13	Q5VXD3	122 aa		11.16	□□□□□ -0.62
ABCF3-213	ENST00000480539	MIR17HG	Q75NE6	70 aa		11.16	□□□□□ -0.62
ABCF3-213	ENST00000480539	LRRC20	Q8TCA0	184 aa		11.16	□□□□□ -0.62
ABCF3-213	ENST00000480539	SPATA25	Q9BR10	227 aa		11.16	□□□□□ -0.62
ABCF3-213	ENST00000480539	SLC25A2	Q9BXI2	301 aa		11.16	□□□□□ -0.62
ABCF3-213	ENST00000480539	SH3BGRL3	Q9H299	93 aa		11.16	□□□□□ -0.62
ABCF3-213	ENST00000480539	ZMAT4	Q9H898	229 aa		11.16	□□□□□ -0.62
ABCF3-213	ENST00000480539	TIMM9	Q9Y5J7	89 aa		11.16	□□□□□ -0.62
ABCF3-213	ENST00000480539	TRAV8-2	A0A0B4J237	113 aa		11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539		A0A1B0GVG6	124 aa		11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	SLC17A3	O00476	420 aa		11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	EIF3G	O75821	320 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	PYY	P10082	97 aa		11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	PRB4	P10163	310 aa	Predicted RBP	11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	ATP6V0C	P27449	155 aa		11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	HLA-DMB	P28068	263 aa		11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	RAB2A	P61019	212 aa		11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	GDF5OS	Q5U4N7	250 aa		11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	LCN15	Q6UWW0	184 aa		11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	TRPT1	Q86TN4	253 aa	Known RBP	11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	RCHY1	Q96PM5	261 aa		11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	MRPL32	Q9BYC8	188 aa	Known RBP	11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	FUT9	Q9Y231	359 aa		11.15	□□□□□ -0.62
ABCF3-213	ENST00000480539	COL7A1	Q02388	2944 aa		11.15	□□□□□ -0.63
ABCF3-213	ENST00000480539	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.14	□□□□□ -0.63
ABCF3-213	ENST00000480539		F6UB75	175 aa		11.14	□□□□□ -0.63
ABCF3-213	ENST00000480539		H3BQ15	152 aa		11.14	□□□□□ -0.63
ABCF3-213	ENST00000480539	IGLC2	P0DOY2	106 aa		11.14	□□□□□ -0.63
ABCF3-213	ENST00000480539	CXCL2	P19875	107 aa		11.14	□□□□□ -0.63
ABCF3-213	ENST00000480539	DEFB135	Q30KP9	77 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms