RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ARPC5O15511 151 aa14.69□□□□□ -0.06
LIME1-205ENST00000480139 SAMD13Q5VXD3 122 aa14.69□□□□□ -0.06
LIME1-205ENST00000480139 LEMD1Q68G75 181 aa14.69□□□□□ -0.06
LIME1-205ENST00000480139 WFDC3Q8IUB2 231 aa14.69□□□□□ -0.06
LIME1-205ENST00000480139 DEFB125Q8N687 156 aa14.69□□□□□ -0.06
LIME1-205ENST00000480139 B9D2Q9BPU9 175 aa14.69□□□□□ -0.06
LIME1-205ENST00000480139 WFDC10AQ9H1F0 79 aa14.69□□□□□ -0.06
LIME1-205ENST00000480139 MAP6D1Q9H9H5 199 aa14.69□□□□□ -0.06
LIME1-205ENST00000480139 FRMD6-AS1P0C7T7 363 aa14.68□□□□□ -0.06
LIME1-205ENST00000480139 MEOX2P50222 304 aa14.68□□□□□ -0.06
LIME1-205ENST00000480139 ZNF345Q14585 488 aa14.68□□□□□ -0.06
LIME1-205ENST00000480139 TCTE3Q8IZS6 198 aa14.68□□□□□ -0.06
LIME1-205ENST00000480139 RSG1Q9BU20 258 aa14.68□□□□□ -0.06
LIME1-205ENST00000480139 UBQLN2Q9UHD9 624 aa14.68□□□□□ -0.06
LIME1-205ENST00000480139 TIMM9Q9Y5J7 89 aa14.68□□□□□ -0.06
LIME1-205ENST00000480139 FAM24BQ8N5W8 94 aa14.67□□□□□ -0.06
LIME1-205ENST00000480139 OR11H4Q8NGC9 324 aa14.67□□□□□ -0.06
LIME1-205ENST00000480139 MFFQ9GZY8 342 aa14.67□□□□□ -0.06
LIME1-205ENST00000480139 TUBA4BQ9H853 241 aa14.67□□□□□ -0.06
LIME1-205ENST00000480139 SRD5A3Q9H8P0 318 aa14.67□□□□□ -0.06
LIME1-205ENST00000480139 SOCS3O14543 225 aa14.66□□□□□ -0.06
LIME1-205ENST00000480139 TAAR5O14804 337 aa14.66□□□□□ -0.06
LIME1-205ENST00000480139 LINC00322Q6ZN03 302 aaPredicted RBP14.66□□□□□ -0.06
LIME1-205ENST00000480139 hCG_2014768A0A024R1R8 64 aa14.65□□□□□ -0.06
LIME1-205ENST00000480139 A0A087X0K7 114 aa14.65□□□□□ -0.06
LIME1-205ENST00000480139 MRPS12O15235 138 aaKnown RBP14.65□□□□□ -0.06
LIME1-205ENST00000480139 PSMB3P49720 205 aa14.65□□□□□ -0.06
LIME1-205ENST00000480139 SNRPD3P62318 126 aaKnown RBP14.65□□□□□ -0.06
LIME1-205ENST00000480139 GCSAMLQ5JQS6 135 aa14.65□□□□□ -0.06
LIME1-205ENST00000480139 MORN5Q5VZ52 161 aa14.65□□□□□ -0.06
LIME1-205ENST00000480139 BPIFA4PQ86YQ2 179 aa14.65□□□□□ -0.06
LIME1-205ENST00000480139 C17orf77Q96MU5 243 aa14.65□□□□□ -0.06
LIME1-205ENST00000480139 CITED4Q96RK1 184 aa14.65□□□□□ -0.06
LIME1-205ENST00000480139 BORCS7-ASMTA0A0B4J1R7 106 aa14.64□□□□□ -0.07
LIME1-205ENST00000480139 ISLRO14498 428 aa14.64□□□□□ -0.07
LIME1-205ENST00000480139 ATF4P18848 351 aaPredicted RBP14.64□□□□□ -0.07
LIME1-205ENST00000480139 DEFB131AP59861 70 aa14.64□□□□□ -0.07
LIME1-205ENST00000480139 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.64□□□□□ -0.07
LIME1-205ENST00000480139 AKAP14Q86UN6 197 aa14.64□□□□□ -0.07
LIME1-205ENST00000480139 KCNRGQ8N5I3 272 aa14.64□□□□□ -0.07
LIME1-205ENST00000480139 PSMG3Q9BT73 122 aaPredicted RBP14.64□□□□□ -0.07
LIME1-205ENST00000480139 MRPL32Q9BYC8 188 aaKnown RBP14.64□□□□□ -0.07
LIME1-205ENST00000480139 ZNF688P0C7X2 276 aa14.63□□□□□ -0.07
LIME1-205ENST00000480139 ID1P41134 155 aa14.63□□□□□ -0.07
LIME1-205ENST00000480139 FFAR4Q5NUL3 377 aa14.63□□□□□ -0.07
LIME1-205ENST00000480139 APRG1Q8IVJ8 170 aa14.63□□□□□ -0.07
LIME1-205ENST00000480139 OR2G3Q8NGZ4 309 aa14.63□□□□□ -0.07
LIME1-205ENST00000480139 A0A0D9SG52 128 aa14.62□□□□□ -0.07
LIME1-205ENST00000480139 RBMY1BA6NDE4 496 aaKnown RBP14.62□□□□□ -0.07
LIME1-205ENST00000480139 RBMY1EA6NEQ0 496 aaKnown RBP14.62□□□□□ -0.07
LIME1-205ENST00000480139 JTBO76095 146 aa14.62□□□□□ -0.07
LIME1-205ENST00000480139 RBMY1DP0C7P1 496 aaKnown RBP14.62□□□□□ -0.07
LIME1-205ENST00000480139 CXCL2P19875 107 aa14.62□□□□□ -0.07
LIME1-205ENST00000480139 FAM78BQ5VT40 261 aa14.62□□□□□ -0.07
LIME1-205ENST00000480139 RPL7L1Q6DKI1 246 aaKnown RBP14.62□□□□□ -0.07
LIME1-205ENST00000480139 HSD17B11Q8NBQ5 300 aa14.62□□□□□ -0.07
LIME1-205ENST00000480139 GNPNAT1Q96EK6 184 aaPredicted RBP14.62□□□□□ -0.07
LIME1-205ENST00000480139 TMEM14CQ9P0S9 112 aa14.62□□□□□ -0.07
LIME1-205ENST00000480139 ATP6V0CP27449 155 aa14.61□□□□□ -0.07
LIME1-205ENST00000480139 SERF2P84101 59 aa14.61□□□□□ -0.07
LIME1-205ENST00000480139 PSMG4Q5JS54 123 aa14.61□□□□□ -0.07
LIME1-205ENST00000480139 ARPC5LQ9BPX5 153 aa14.61□□□□□ -0.07
LIME1-205ENST00000480139 CYTL1Q9NRR1 136 aa14.61□□□□□ -0.07
LIME1-205ENST00000480139 FUT9Q9Y231 359 aa14.61□□□□□ -0.07
LIME1-205ENST00000480139 LOC102724200A0A096LPH7 203 aaPredicted RBP14.6□□□□□ -0.07
LIME1-205ENST00000480139 TRAV5A0A0B4J249 113 aa14.6□□□□□ -0.07
LIME1-205ENST00000480139 A0A1B0GVG6 124 aa14.6□□□□□ -0.07
LIME1-205ENST00000480139 C1QBP02746 253 aa14.6□□□□□ -0.07
LIME1-205ENST00000480139 NHLRC4P0CG21 123 aaPredicted RBP14.6□□□□□ -0.07
LIME1-205ENST00000480139 IGLC2P0DOY2 106 aa14.6□□□□□ -0.07
LIME1-205ENST00000480139 M6PRP20645 277 aa14.6□□□□□ -0.07
LIME1-205ENST00000480139 GUK1Q16774 197 aa14.6□□□□□ -0.07
LIME1-205ENST00000480139 ACOT6Q3I5F7 207 aaPredicted RBP14.6□□□□□ -0.07
LIME1-205ENST00000480139 LCN15Q6UWW0 184 aa14.6□□□□□ -0.07
LIME1-205ENST00000480139 SBSPONQ8IVN8 264 aa14.6□□□□□ -0.07
LIME1-205ENST00000480139 C16orf92Q96LL3 132 aa14.6□□□□□ -0.07
LIME1-205ENST00000480139 HRH4Q9H3N8 390 aa14.6□□□□□ -0.07
LIME1-205ENST00000480139 RHOBP62745 196 aa14.59□□□□□ -0.07
LIME1-205ENST00000480139 ZNF124Q15973 351 aa14.59□□□□□ -0.07
LIME1-205ENST00000480139 SLC25A2Q9BXI2 301 aa14.59□□□□□ -0.07
LIME1-205ENST00000480139 RFNGQ9Y644 331 aa14.59□□□□□ -0.07
LIME1-205ENST00000480139 KIR2DL5BA0A0G2JN68 375 aa14.58□□□□□ -0.08
LIME1-205ENST00000480139 KIR2DL5BA0A0G2JPC4 375 aa14.58□□□□□ -0.08
LIME1-205ENST00000480139 HAGHQ16775 308 aa14.58□□□□□ -0.08
LIME1-205ENST00000480139 SPATA31B1PQ5VZV4 182 aa14.58□□□□□ -0.08
LIME1-205ENST00000480139 MIR17HGQ75NE6 70 aa14.58□□□□□ -0.08
LIME1-205ENST00000480139 KIR2DL5AQ8N109 375 aa14.58□□□□□ -0.08
LIME1-205ENST00000480139 KIR2DL5BQ8NHK3 375 aa14.58□□□□□ -0.08
LIME1-205ENST00000480139 FAM167A-AS1Q96KT0 104 aa14.58□□□□□ -0.08
LIME1-205ENST00000480139 SLC50A1Q9BRV3 221 aa14.58□□□□□ -0.08
LIME1-205ENST00000480139 TRAV8-2A0A0B4J237 113 aa14.57□□□□□ -0.08
LIME1-205ENST00000480139 BCL2L11O43521 198 aa14.57□□□□□ -0.08
LIME1-205ENST00000480139 ZNF253O75346 499 aa14.57□□□□□ -0.08
LIME1-205ENST00000480139 MBP02144 154 aa14.57□□□□□ -0.08
LIME1-205ENST00000480139 APOC4P55056 127 aa14.57□□□□□ -0.08
LIME1-205ENST00000480139 HYLS1Q96M11 299 aa14.57□□□□□ -0.08
LIME1-205ENST00000480139 TM2D3Q9BRN9 247 aa14.57□□□□□ -0.08
LIME1-205ENST00000480139 SH3BGRL3Q9H299 93 aa14.57□□□□□ -0.08
LIME1-205ENST00000480139 KANTRA0A1W2PQU2 76 aa14.56□□□□□ -0.08
LIME1-205ENST00000480139 H3BQ15 152 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms