RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 HOGA1Q86XE5 327 aa7.58□□□□□ -1.2
USP11-208ENST00000480104 RNASEH2CQ8TDP1 164 aaKnown RBP7.58□□□□□ -1.2
USP11-208ENST00000480104 VGLL1Q99990 258 aa7.58□□□□□ -1.2
USP11-208ENST00000480104 PDCD10Q9BUL8 212 aa7.58□□□□□ -1.2
USP11-208ENST00000480104 MRPL32Q9BYC8 188 aaKnown RBP7.58□□□□□ -1.2
USP11-208ENST00000480104 CCDC90BQ9GZT6 254 aa7.58□□□□□ -1.2
USP11-208ENST00000480104 SLC25A22Q9H936 323 aa7.58□□□□□ -1.2
USP11-208ENST00000480104 IFITM5A6NNB3 132 aa7.57□□□□□ -1.2
USP11-208ENST00000480104 SPINK4O60575 86 aa7.57□□□□□ -1.2
USP11-208ENST00000480104 IGKV1-5P01602 117 aa7.57□□□□□ -1.2
USP11-208ENST00000480104 PSMA1P25786 263 aaKnown RBP7.57□□□□□ -1.2
USP11-208ENST00000480104 ZNF90Q03938 601 aa7.57□□□□□ -1.2
USP11-208ENST00000480104 FGL1Q08830 312 aa7.57□□□□□ -1.2
USP11-208ENST00000480104 TXNDC17Q9BRA2 123 aa7.57□□□□□ -1.2
USP11-208ENST00000480104 FXYD6Q9H0Q3 95 aa7.57□□□□□ -1.2
USP11-208ENST00000480104 RRP15Q9Y3B9 282 aaKnown RBP7.57□□□□□ -1.2
USP11-208ENST00000480104 GPR31O00270 319 aa7.56□□□□□ -1.2
USP11-208ENST00000480104 CASQ2O14958 399 aaPredicted RBP7.56□□□□□ -1.2
USP11-208ENST00000480104 HSMCR30P0CW71 290 aa7.56□□□□□ -1.2
USP11-208ENST00000480104 PPT1P50897 306 aa7.56□□□□□ -1.2
USP11-208ENST00000480104 AHSA2Q719I0 299 aa7.56□□□□□ -1.2
USP11-208ENST00000480104 Q8N3U1 123 aa7.56□□□□□ -1.2
USP11-208ENST00000480104 TMEM170AQ8WVE7 144 aa7.56□□□□□ -1.2
USP11-208ENST00000480104 SLC25A31Q9H0C2 315 aa7.56□□□□□ -1.2
USP11-208ENST00000480104 MRPL16Q9NX20 251 aaKnown RBP7.56□□□□□ -1.2
USP11-208ENST00000480104 KLF12Q9Y4X4 402 aa7.56□□□□□ -1.2
USP11-208ENST00000480104 TRAV12-3A0A0B4J271 114 aa7.55□□□□□ -1.2
USP11-208ENST00000480104 TRGV4A0A0C4DH28 118 aa7.55□□□□□ -1.2
USP11-208ENST00000480104 J3KRW8 73 aa7.55□□□□□ -1.2
USP11-208ENST00000480104 TIRAPP58753 221 aa7.55□□□□□ -1.2
USP11-208ENST00000480104 TAS2R20P59543 309 aa7.55□□□□□ -1.2
USP11-208ENST00000480104 CCDC190Q86UF4 302 aa7.55□□□□□ -1.2
USP11-208ENST00000480104 ZNF680Q8NEM1 530 aa7.55□□□□□ -1.2
USP11-208ENST00000480104 ATP6V0E2Q8NHE4 81 aa7.55□□□□□ -1.2
USP11-208ENST00000480104 PYGO2Q9BRQ0 406 aa7.55□□□□□ -1.2
USP11-208ENST00000480104 ZNF2Q9BSG1 426 aaPredicted RBP7.55□□□□□ -1.2
USP11-208ENST00000480104 EHFQ9NZC4 300 aa7.55□□□□□ -1.2
USP11-208ENST00000480104 IGKV1D-37A0A075B6S9 117 aa7.54□□□□□ -1.2
USP11-208ENST00000480104 TRAV8-6A0A0B4J262 113 aa7.54□□□□□ -1.2
USP11-208ENST00000480104 ZFP92A6NM28 416 aa7.54□□□□□ -1.2
USP11-208ENST00000480104 ORM1P02763 201 aa7.54□□□□□ -1.2
USP11-208ENST00000480104 C2orf83Q53S99 150 aa7.54□□□□□ -1.2
USP11-208ENST00000480104 OR10J3Q5JRS4 329 aa7.54□□□□□ -1.2
USP11-208ENST00000480104 C1orf146Q5VVC0 180 aa7.54□□□□□ -1.2
USP11-208ENST00000480104 ETFRF1Q6IPR1 90 aa7.54□□□□□ -1.2
USP11-208ENST00000480104 TBC1D26Q86UD7 250 aa7.54□□□□□ -1.2
USP11-208ENST00000480104 OR5AP2Q8NGF4 316 aa7.54□□□□□ -1.2
USP11-208ENST00000480104 TRAV8-3A0A0A6YYJ7 113 aa7.53□□□□□ -1.2
USP11-208ENST00000480104 LOC100131303A0A0U1RQF7 123 aa7.53□□□□□ -1.2
USP11-208ENST00000480104 SFTA3P0C7M3 94 aa7.53□□□□□ -1.2
USP11-208ENST00000480104 CXCL3P19876 107 aa7.53□□□□□ -1.2
USP11-208ENST00000480104 OR1B1Q8NGR6 318 aa7.53□□□□□ -1.2
USP11-208ENST00000480104 PYDC1Q8WXC3 89 aa7.53□□□□□ -1.2
USP11-208ENST00000480104 UFD1Q92890 307 aa7.53□□□□□ -1.2
USP11-208ENST00000480104 MND1Q9BWT6 205 aa7.53□□□□□ -1.2
USP11-208ENST00000480104 PSORS1C1Q9UIG5 152 aa7.53□□□□□ -1.2
USP11-208ENST00000480104 LSM2Q9Y333 95 aaKnown RBP7.53□□□□□ -1.2
USP11-208ENST00000480104 KIF25-AS1Q9Y6Z4 181 aa7.53□□□□□ -1.2
USP11-208ENST00000480104 HRH1P35367 487 aa7.52□□□□□ -1.21
USP11-208ENST00000480104 AKR1C2P52895 323 aa7.52□□□□□ -1.21
USP11-208ENST00000480104 TCL1AP56279 114 aa7.52□□□□□ -1.21
USP11-208ENST00000480104 KLF9Q13886 244 aaPredicted RBP7.52□□□□□ -1.21
USP11-208ENST00000480104 DHRS11Q6UWP2 260 aa7.52□□□□□ -1.21
USP11-208ENST00000480104 RPUSD4Q96CM3 377 aaKnown RBP7.52□□□□□ -1.21
USP11-208ENST00000480104 HEYLQ9NQ87 328 aaPredicted RBP7.52□□□□□ -1.21
USP11-208ENST00000480104 SNRPGP15A8MWD9 76 aa7.51□□□□□ -1.21
USP11-208ENST00000480104 RFX2P48378 723 aa7.51□□□□□ -1.21
USP11-208ENST00000480104 FABP5Q01469 135 aa7.51□□□□□ -1.21
USP11-208ENST00000480104 SPHARQ15513 63 aa7.51□□□□□ -1.21
USP11-208ENST00000480104 REG3GQ6UW15 175 aa7.51□□□□□ -1.21
USP11-208ENST00000480104 NHLRC2Q8NBF2 726 aa7.51□□□□□ -1.21
USP11-208ENST00000480104 ZNF555Q8NEP9 628 aa7.51□□□□□ -1.21
USP11-208ENST00000480104 OR4D5Q8NGN0 318 aa7.51□□□□□ -1.21
USP11-208ENST00000480104 TMEM56-RWDD3S4R434 201 aa7.51□□□□□ -1.21
USP11-208ENST00000480104 PDCD5O14737 125 aa7.5□□□□□ -1.21
USP11-208ENST00000480104 PHOX2AO14813 284 aa7.5□□□□□ -1.21
USP11-208ENST00000480104 SCGNO76038 276 aa7.5□□□□□ -1.21
USP11-208ENST00000480104 SPCS3P61009 180 aa7.5□□□□□ -1.21
USP11-208ENST00000480104 C10orf67Q8IYJ2 551 aa7.5□□□□□ -1.21
USP11-208ENST00000480104 ZNF479Q96JC4 524 aa7.5□□□□□ -1.21
USP11-208ENST00000480104 GPR82Q96P67 336 aa7.5□□□□□ -1.21
USP11-208ENST00000480104 BOLA1Q9Y3E2 137 aa7.5□□□□□ -1.21
USP11-208ENST00000480104 COX11Q9Y6N1 276 aa7.5□□□□□ -1.21
USP11-208ENST00000480104 A0A0G2JRQ6 117 aa7.49□□□□□ -1.21
USP11-208ENST00000480104 LINC00854A0A1B0GVQ3 168 aa7.49□□□□□ -1.21
USP11-208ENST00000480104 MEIS3P1A6NDR6 274 aa7.49□□□□□ -1.21
USP11-208ENST00000480104 FABP1P07148 127 aa7.49□□□□□ -1.21
USP11-208ENST00000480104 S100GP29377 79 aa7.49□□□□□ -1.21
USP11-208ENST00000480104 LAIR2Q6ISS4 152 aa7.49□□□□□ -1.21
USP11-208ENST00000480104 SH2D6Q7Z4S9 175 aa7.49□□□□□ -1.21
USP11-208ENST00000480104 IQCF2Q8IXL9 164 aa7.49□□□□□ -1.21
USP11-208ENST00000480104 C9orf16Q9BUW7 83 aa7.49□□□□□ -1.21
USP11-208ENST00000480104 TRAV18A0A075B6X5 111 aa7.48□□□□□ -1.21
USP11-208ENST00000480104 IGKV1OR2-108A0A075B7D4 117 aa7.48□□□□□ -1.21
USP11-208ENST00000480104 TRAV8-1A0A0A6YYK1 113 aa7.48□□□□□ -1.21
USP11-208ENST00000480104 SMIM30A4D0T7 59 aa7.48□□□□□ -1.21
USP11-208ENST00000480104 PMP2P02689 132 aa7.48□□□□□ -1.21
USP11-208ENST00000480104 TRAM1Q15629 374 aa7.48□□□□□ -1.21
USP11-208ENST00000480104 ANXA2RQ3ZCQ2 193 aa7.48□□□□□ -1.21
USP11-208ENST00000480104 TEPPQ6URK8 271 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms