RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 TMEM252Q8N6L7 170 aa10.1□□□□□ -0.79
SOX2-OT-208ENST00000477928 SHANK2-AS3Q9BTD1 123 aa10.1□□□□□ -0.79
SOX2-OT-208ENST00000477928 SLC25A39Q9BZJ4 359 aaPredicted RBP10.1□□□□□ -0.79
SOX2-OT-208ENST00000477928 C11orf68Q9H3H3 251 aaKnown RBP10.1□□□□□ -0.79
SOX2-OT-208ENST00000477928 E5RGE8 158 aa10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 GOSR2O14653 212 aa10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 MPDU1O75352 247 aa10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 PET100P0DJ07 73 aa10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 HLA-DRB4P13762 266 aa10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 GATA2P23769 480 aaPredicted RBP10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 BAXQ07812 192 aa10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 ARL16Q0P5N6 197 aa10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 ACTL10Q5JWF8 245 aa10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 RARRES2Q99969 163 aa10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 SLC25A31Q9H0C2 315 aa10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 UQCC1Q9NVA1 299 aa10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 HLA-DRB4X5D2U9 266 aa10.09□□□□□ -0.79
SOX2-OT-208ENST00000477928 A0A087X0K7 114 aa10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 FAM24AA6NFZ4 105 aa10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 H3BMM0 161 aa10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 AGPAT2O15120 278 aa10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 PTTG1O95997 202 aa10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 GIG44P09565 113 aaPredicted RBP10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 CXCL2P19875 107 aa10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 Q6ZRG5 221 aa10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 ARV1Q9H2C2 271 aa10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 SLC25A32Q9H2D1 315 aa10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 SAV1Q9H4B6 383 aaPredicted RBP10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 RPRMQ9NS64 109 aa10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 WDR83OSQ9Y284 106 aa10.08□□□□□ -0.8
SOX2-OT-208ENST00000477928 PLECQ15149 4684 aaKnown RBP10.07□□□□□ -0.8
SOX2-OT-208ENST00000477928 DEFB4AO15263 64 aa10.07□□□□□ -0.8
SOX2-OT-208ENST00000477928 OR5G3P0C626 314 aa10.07□□□□□ -0.8
SOX2-OT-208ENST00000477928 RPL29P47914 159 aaKnown RBP10.07□□□□□ -0.8
SOX2-OT-208ENST00000477928 CAMLGP49069 296 aa10.07□□□□□ -0.8
SOX2-OT-208ENST00000477928 DEFB1P60022 68 aa10.07□□□□□ -0.8
SOX2-OT-208ENST00000477928 OR1L4Q8NGR5 311 aa10.07□□□□□ -0.8
SOX2-OT-208ENST00000477928 OR11H2Q8NH07 326 aa10.07□□□□□ -0.8
SOX2-OT-208ENST00000477928 C16orf92Q96LL3 132 aa10.07□□□□□ -0.8
SOX2-OT-208ENST00000477928 ARL6Q9H0F7 186 aa10.07□□□□□ -0.8
SOX2-OT-208ENST00000477928 SLC25A22Q9H936 323 aa10.07□□□□□ -0.8
SOX2-OT-208ENST00000477928 CXorf65A6NEN9 183 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 ZNF705EA8MWA4 302 aaPredicted RBP10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 SSNA1O43805 119 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 CST7O76096 145 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 MIFP14174 115 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 C4BPBP20851 252 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 PRR20EP86478 221 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 PRR20CP86479 221 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 PRR20DP86480 221 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 PRR20BP86481 221 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 PRR20AP86496 221 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 EBLN2Q6P2I7 272 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 PFDN5Q99471 154 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 MGST2Q99735 147 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 RSG1Q9BU20 258 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 MFFQ9GZY8 342 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 CLEC5AQ9NY25 188 aa10.06□□□□□ -0.8
SOX2-OT-208ENST00000477928 IGSF23A1L1A6 192 aa10.05□□□□□ -0.8
SOX2-OT-208ENST00000477928 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.05□□□□□ -0.8
SOX2-OT-208ENST00000477928 LINC00305Q7Z4B0 112 aa10.05□□□□□ -0.8
SOX2-OT-208ENST00000477928 BPIFA4PQ86YQ2 179 aa10.05□□□□□ -0.8
SOX2-OT-208ENST00000477928 CSNK1G2-AS1Q8NCQ2 148 aa10.05□□□□□ -0.8
SOX2-OT-208ENST00000477928 LINC00052Q96N35 136 aa10.05□□□□□ -0.8
SOX2-OT-208ENST00000477928 SCRT1Q9BWW7 348 aa10.05□□□□□ -0.8
SOX2-OT-208ENST00000477928 DNAJC4Q9NNZ3 241 aa10.05□□□□□ -0.8
SOX2-OT-208ENST00000477928 KCNIP2Q9NS61 270 aa10.05□□□□□ -0.8
SOX2-OT-208ENST00000477928 NUPR2A6NF83 97 aa10.04□□□□□ -0.8
SOX2-OT-208ENST00000477928 A8MTW9 85 aa10.04□□□□□ -0.8
SOX2-OT-208ENST00000477928 COX7A2P2O60397 106 aa10.04□□□□□ -0.8
SOX2-OT-208ENST00000477928 C10orf113Q5VZT2 155 aa10.04□□□□□ -0.8
SOX2-OT-208ENST00000477928 PATE2Q6UY27 113 aa10.04□□□□□ -0.8
SOX2-OT-208ENST00000477928 PPP1R1CQ8WVI7 109 aa10.04□□□□□ -0.8
SOX2-OT-208ENST00000477928 NEU1Q99519 415 aa10.04□□□□□ -0.8
SOX2-OT-208ENST00000477928 HRH4Q9H3N8 390 aa10.04□□□□□ -0.8
SOX2-OT-208ENST00000477928 DOK5Q9P104 306 aa10.04□□□□□ -0.8
SOX2-OT-208ENST00000477928 HYDINQ4G0P3 5121 aa10.04□□□□□ -0.8
SOX2-OT-208ENST00000477928 DNAH1Q9P2D7 4330 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 A0A0J9YX75 114 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 MRPS12O15235 138 aaKnown RBP10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 DUSP14O95147 198 aaKnown RBP10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 SIX6O95475 246 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 H2BFSP57053 126 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 B2MP61769 119 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 OPCMLQ14982 345 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 GUK1Q16774 197 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 LCN15Q6UWW0 184 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 ASB13Q8WXK3 278 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 TMEM37Q8WXS4 190 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 C17orf77Q96MU5 243 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 UHRF2Q96PU4 802 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 SLC50A1Q9BRV3 221 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 ALMS1Q8TCU4 4167 aa10.03□□□□□ -0.8
SOX2-OT-208ENST00000477928 UBE2L5PA0A1B0GUS4 154 aa10.02□□□□□ -0.81
SOX2-OT-208ENST00000477928 SMIM9A6NGZ8 99 aa10.02□□□□□ -0.81
SOX2-OT-208ENST00000477928 MPC2O95563 127 aa10.02□□□□□ -0.81
SOX2-OT-208ENST00000477928 AMBPP02760 352 aa10.02□□□□□ -0.81
SOX2-OT-208ENST00000477928 NANOS2P60321 138 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-208ENST00000477928 PSG9Q00887 426 aa10.02□□□□□ -0.81
SOX2-OT-208ENST00000477928 Q8NAQ8 132 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms