RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 RAB2AP61019 212 aa11.53□□□□□ -0.56
SEC13-215ENST00000477547 RPL11P62913 178 aaKnown RBP11.53□□□□□ -0.56
SEC13-215ENST00000477547 EIF5AP63241 154 aaKnown RBP11.53□□□□□ -0.56
SEC13-215ENST00000477547 EGFEM1PQ0D2K5 195 aa11.53□□□□□ -0.56
SEC13-215ENST00000477547 GUCA2BQ16661 112 aa11.53□□□□□ -0.56
SEC13-215ENST00000477547 BEAN1Q3B7T3 259 aa11.53□□□□□ -0.56
SEC13-215ENST00000477547 ACOT6Q3I5F7 207 aaPredicted RBP11.53□□□□□ -0.56
SEC13-215ENST00000477547 MORN5Q5VZ52 161 aa11.53□□□□□ -0.56
SEC13-215ENST00000477547 RNF24Q9Y225 148 aa11.53□□□□□ -0.56
SEC13-215ENST00000477547 TSPAN4O14817 238 aa11.52□□□□□ -0.57
SEC13-215ENST00000477547 PRB2P02812 416 aaPredicted RBP11.52□□□□□ -0.57
SEC13-215ENST00000477547 TPT1P13693 172 aaKnown RBP11.52□□□□□ -0.57
SEC13-215ENST00000477547 FAM78BQ5VT40 261 aa11.52□□□□□ -0.57
SEC13-215ENST00000477547 FAM90A2PQ658T7 463 aa11.52□□□□□ -0.57
SEC13-215ENST00000477547 STXBP6Q8NFX7 210 aa11.52□□□□□ -0.57
SEC13-215ENST00000477547 STOML3Q8TAV4 291 aa11.52□□□□□ -0.57
SEC13-215ENST00000477547 SPAG8Q99932 426 aaPredicted RBP11.52□□□□□ -0.57
SEC13-215ENST00000477547 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
SEC13-215ENST00000477547 ZNF256Q9Y2P7 627 aaPredicted RBP11.52□□□□□ -0.57
SEC13-215ENST00000477547 GP9P14770 177 aa11.51□□□□□ -0.57
SEC13-215ENST00000477547 M6PRP20645 277 aa11.51□□□□□ -0.57
SEC13-215ENST00000477547 GALR1P47211 349 aa11.51□□□□□ -0.57
SEC13-215ENST00000477547 TFPI2P48307 235 aa11.51□□□□□ -0.57
SEC13-215ENST00000477547 SERF2P84101 59 aa11.51□□□□□ -0.57
SEC13-215ENST00000477547 KPRPQ5T749 579 aaPredicted RBP11.51□□□□□ -0.57
SEC13-215ENST00000477547 SPATA31B1PQ5VZV4 182 aa11.51□□□□□ -0.57
SEC13-215ENST00000477547 GBGT1Q8N5D6 347 aa11.51□□□□□ -0.57
SEC13-215ENST00000477547 GPR82Q96P67 336 aa11.51□□□□□ -0.57
SEC13-215ENST00000477547 ZMAT5Q9UDW3 170 aaKnown RBP11.51□□□□□ -0.57
SEC13-215ENST00000477547 SPP1P10451 314 aa11.5□□□□□ -0.57
SEC13-215ENST00000477547 RPL7P18124 248 aaKnown RBP11.5□□□□□ -0.57
SEC13-215ENST00000477547 KRTAP10-11P60412 298 aa11.5□□□□□ -0.57
SEC13-215ENST00000477547 RHOBP62745 196 aa11.5□□□□□ -0.57
SEC13-215ENST00000477547 FAM122CQ6P4D5 195 aa11.5□□□□□ -0.57
SEC13-215ENST00000477547 MIR17HGQ75NE6 70 aa11.5□□□□□ -0.57
SEC13-215ENST00000477547 SLC51BQ86UW2 128 aa11.5□□□□□ -0.57
SEC13-215ENST00000477547 BAP18Q8IXM2 172 aa11.5□□□□□ -0.57
SEC13-215ENST00000477547 PRR25Q96S07 402 aa11.5□□□□□ -0.57
SEC13-215ENST00000477547 MS4A6AQ9H2W1 248 aa11.5□□□□□ -0.57
SEC13-215ENST00000477547 SEPSECSQ9HD40 501 aaKnown RBP11.5□□□□□ -0.57
SEC13-215ENST00000477547 FUT9Q9Y231 359 aa11.5□□□□□ -0.57
SEC13-215ENST00000477547 TRAV5A0A0B4J249 113 aa11.49□□□□□ -0.57
SEC13-215ENST00000477547 OR4C46A6NHA9 309 aa11.49□□□□□ -0.57
SEC13-215ENST00000477547 MBP02144 154 aa11.49□□□□□ -0.57
SEC13-215ENST00000477547 ATF4P18848 351 aaPredicted RBP11.49□□□□□ -0.57
SEC13-215ENST00000477547 PAFAH1B2P68402 229 aa11.49□□□□□ -0.57
SEC13-215ENST00000477547 TMEM41BQ5BJD5 291 aa11.49□□□□□ -0.57
SEC13-215ENST00000477547 AKR1C8PQ5T2L2 129 aa11.49□□□□□ -0.57
SEC13-215ENST00000477547 OR10G4Q8NGN3 311 aa11.49□□□□□ -0.57
SEC13-215ENST00000477547 OR10G9Q8NGN4 311 aa11.49□□□□□ -0.57
SEC13-215ENST00000477547 OR10G7Q8NGN6 311 aa11.49□□□□□ -0.57
SEC13-215ENST00000477547 NRN1Q9NPD7 142 aa11.49□□□□□ -0.57
SEC13-215ENST00000477547 A0A1W2PPV4 95 aa11.48□□□□□ -0.57
SEC13-215ENST00000477547 ZNF785A8K8V0 405 aa11.48□□□□□ -0.57
SEC13-215ENST00000477547 DNASE2O00115 360 aaPredicted RBP11.48□□□□□ -0.57
SEC13-215ENST00000477547 SEC11BP0C7V7 166 aa11.48□□□□□ -0.57
SEC13-215ENST00000477547 CDC34P49427 236 aaPredicted RBP11.48□□□□□ -0.57
SEC13-215ENST00000477547 GTSCR1Q86UQ5 136 aa11.48□□□□□ -0.57
SEC13-215ENST00000477547 BPIFA4PQ86YQ2 179 aa11.48□□□□□ -0.57
SEC13-215ENST00000477547 WFDC3Q8IUB2 231 aa11.48□□□□□ -0.57
SEC13-215ENST00000477547 TMED6Q8WW62 240 aa11.48□□□□□ -0.57
SEC13-215ENST00000477547 SLC25A2Q9BXI2 301 aa11.48□□□□□ -0.57
SEC13-215ENST00000477547 TRAV2A0A0B4J234 112 aa11.47□□□□□ -0.57
SEC13-215ENST00000477547 TAS2R45P59539 299 aa11.47□□□□□ -0.57
SEC13-215ENST00000477547 CD81P60033 236 aa11.47□□□□□ -0.57
SEC13-215ENST00000477547 KHDC3LQ587J8 217 aa11.47□□□□□ -0.57
SEC13-215ENST00000477547 BOLA1Q9Y3E2 137 aa11.47□□□□□ -0.57
SEC13-215ENST00000477547 A0A087X0K7 114 aa11.46□□□□□ -0.57
SEC13-215ENST00000477547 K7EQG2 157 aa11.46□□□□□ -0.57
SEC13-215ENST00000477547 MRPS12O15235 138 aaKnown RBP11.46□□□□□ -0.57
SEC13-215ENST00000477547 OR7C2O60412 319 aa11.46□□□□□ -0.57
SEC13-215ENST00000477547 EIF3GO75821 320 aaKnown RBP eCLIP11.46□□□□□ -0.57
SEC13-215ENST00000477547 MEOX2P50222 304 aa11.46□□□□□ -0.57
SEC13-215ENST00000477547 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.46□□□□□ -0.57
SEC13-215ENST00000477547 DCANP1Q8TF63 244 aa11.46□□□□□ -0.57
SEC13-215ENST00000477547 FAM167A-AS1Q96KT0 104 aa11.46□□□□□ -0.57
SEC13-215ENST00000477547 RPRMQ9NS64 109 aa11.46□□□□□ -0.57
SEC13-215ENST00000477547 SMAD5-AS1Q9Y6J3 95 aa11.46□□□□□ -0.57
SEC13-215ENST00000477547 CD7P09564 240 aa11.45□□□□□ -0.58
SEC13-215ENST00000477547 PYYP10082 97 aa11.45□□□□□ -0.58
SEC13-215ENST00000477547 UBE2L3P68036 154 aaKnown RBP11.45□□□□□ -0.58
SEC13-215ENST00000477547 EIF5AL1Q6IS14 154 aaKnown RBP11.45□□□□□ -0.58
SEC13-215ENST00000477547 RPP25LQ8N5L8 163 aaKnown RBP11.45□□□□□ -0.58
SEC13-215ENST00000477547 FAM24BQ8N5W8 94 aa11.45□□□□□ -0.58
SEC13-215ENST00000477547 ACTR3CQ9C0K3 210 aaPredicted RBP11.45□□□□□ -0.58
SEC13-215ENST00000477547 AURKAIP1Q9NWT8 199 aaPredicted RBP11.45□□□□□ -0.58
SEC13-215ENST00000477547 TMEM14CQ9P0S9 112 aa11.45□□□□□ -0.58
SEC13-215ENST00000477547 UMAD1C9J7I0 102 aa11.44□□□□□ -0.58
SEC13-215ENST00000477547 HMGB3O15347 200 aaKnown RBP11.44□□□□□ -0.58
SEC13-215ENST00000477547 SNRPCP09234 159 aaKnown RBP11.44□□□□□ -0.58
SEC13-215ENST00000477547 ZNF688P0C7X2 276 aa11.44□□□□□ -0.58
SEC13-215ENST00000477547 IGLC2P0DOY2 106 aa11.44□□□□□ -0.58
SEC13-215ENST00000477547 ODF3L2Q3SX64 289 aa11.44□□□□□ -0.58
SEC13-215ENST00000477547 SAMD13Q5VXD3 122 aa11.44□□□□□ -0.58
SEC13-215ENST00000477547 LCN15Q6UWW0 184 aa11.44□□□□□ -0.58
SEC13-215ENST00000477547 RAB24Q969Q5 203 aa11.44□□□□□ -0.58
SEC13-215ENST00000477547 PAXXQ9BUH6 204 aa11.44□□□□□ -0.58
SEC13-215ENST00000477547 MAP6D1Q9H9H5 199 aa11.44□□□□□ -0.58
SEC13-215ENST00000477547 UBQLN2Q9UHD9 624 aa11.44□□□□□ -0.58
SEC13-215ENST00000477547 CTXND1A0A1B0GTU2 59 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms