RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 FXYD6-FXYD2A0A087WZ82 144 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 FRMD6-AS1P0C7T7 363 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 NHLRC4P0CG21 123 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-205ENST00000477508 SNRPD3P62318 126 aaKnown RBP9.78□□□□□ -0.84
TOP3A-205ENST00000477508 ODF3L2Q3SX64 289 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 Q5BKY6 102 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 MIC13Q5XKP0 118 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 PATE2Q6UY27 113 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 LINC00305Q7Z4B0 112 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 DEFB125Q8N687 156 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 GATAD1Q8WUU5 269 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 SCRT1Q9BWW7 348 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 SMIM3Q9BZL3 60 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 SRD5A3Q9H8P0 318 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 SLC25A22Q9H936 323 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 TNFSF18Q9UNG2 199 aa9.78□□□□□ -0.84
TOP3A-205ENST00000477508 ID1P41134 155 aa9.77□□□□□ -0.85
TOP3A-205ENST00000477508 TMEM37Q8WXS4 190 aa9.77□□□□□ -0.85
TOP3A-205ENST00000477508 SLC25A32Q9H2D1 315 aa9.77□□□□□ -0.85
TOP3A-205ENST00000477508 MAP6D1Q9H9H5 199 aa9.77□□□□□ -0.85
TOP3A-205ENST00000477508 BPIFA4PQ86YQ2 179 aa9.76□□□□□ -0.85
TOP3A-205ENST00000477508 UHRF2Q96PU4 802 aa9.76□□□□□ -0.85
TOP3A-205ENST00000477508 RSG1Q9BU20 258 aa9.76□□□□□ -0.85
TOP3A-205ENST00000477508 UBQLN2Q9UHD9 624 aa9.76□□□□□ -0.85
TOP3A-205ENST00000477508 LOC102724200A0A096LPH7 203 aaPredicted RBP9.75□□□□□ -0.85
TOP3A-205ENST00000477508 RNF222A6NCQ9 220 aa9.75□□□□□ -0.85
TOP3A-205ENST00000477508 G3V3Q6 166 aa9.75□□□□□ -0.85
TOP3A-205ENST00000477508 ISLRO14498 428 aa9.75□□□□□ -0.85
TOP3A-205ENST00000477508 TAAR5O14804 337 aa9.75□□□□□ -0.85
TOP3A-205ENST00000477508 ZNF688P0C7X2 276 aa9.75□□□□□ -0.85
TOP3A-205ENST00000477508 ATF4P18848 351 aaPredicted RBP9.75□□□□□ -0.85
TOP3A-205ENST00000477508 PSMB3P49720 205 aa9.75□□□□□ -0.85
TOP3A-205ENST00000477508 DEFB131AP59861 70 aa9.75□□□□□ -0.85
TOP3A-205ENST00000477508 LEMD1Q68G75 181 aa9.75□□□□□ -0.85
TOP3A-205ENST00000477508 LINC00322Q6ZN03 302 aaPredicted RBP9.75□□□□□ -0.85
TOP3A-205ENST00000477508 WFDC10AQ9H1F0 79 aa9.75□□□□□ -0.85
TOP3A-205ENST00000477508 WFDC1Q9HC57 220 aa9.75□□□□□ -0.85
TOP3A-205ENST00000477508 TIMM9Q9Y5J7 89 aa9.75□□□□□ -0.85
TOP3A-205ENST00000477508 A0A087X0K7 114 aa9.74□□□□□ -0.85
TOP3A-205ENST00000477508 BORCS7-ASMTA0A0B4J1R7 106 aa9.74□□□□□ -0.85
TOP3A-205ENST00000477508 RBMY1BA6NDE4 496 aaKnown RBP9.74□□□□□ -0.85
TOP3A-205ENST00000477508 RBMY1EA6NEQ0 496 aaKnown RBP9.74□□□□□ -0.85
TOP3A-205ENST00000477508 HMSDA8MTL9 139 aa9.74□□□□□ -0.85
TOP3A-205ENST00000477508 RBMY1DP0C7P1 496 aaKnown RBP9.74□□□□□ -0.85
TOP3A-205ENST00000477508 APOC4P55056 127 aa9.74□□□□□ -0.85
TOP3A-205ENST00000477508 KIR2DL5BA0A0G2JN68 375 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 KIR2DL5BA0A0G2JPC4 375 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 ARPC5O15511 151 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 CXCL2P19875 107 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 GUK1Q16774 197 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 PSMG4Q5JS54 123 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 FFAR4Q5NUL3 377 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 APRG1Q8IVJ8 170 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 SBSPONQ8IVN8 264 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 KIR2DL5AQ8N109 375 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 FAM24BQ8N5W8 94 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 KIR2DL5BQ8NHK3 375 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 C16orf92Q96LL3 132 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 MRPL32Q9BYC8 188 aaKnown RBP9.73□□□□□ -0.85
TOP3A-205ENST00000477508 MFFQ9GZY8 342 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 ZMAT4Q9H898 229 aa9.73□□□□□ -0.85
TOP3A-205ENST00000477508 TGP01266 2768 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 UBE2CO00762 179 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 SOCS3O14543 225 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 JTBO76095 146 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 ZNF345Q14585 488 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 HAGHQ16775 308 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 ACOT6Q3I5F7 207 aaPredicted RBP9.72□□□□□ -0.85
TOP3A-205ENST00000477508 FAM78BQ5VT40 261 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 SPATA31B1PQ5VZV4 182 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 LCN15Q6UWW0 184 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 STHQ8IWL8 128 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 TCTE3Q8IZS6 198 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 GNPNAT1Q96EK6 184 aaPredicted RBP9.72□□□□□ -0.85
TOP3A-205ENST00000477508 ASCL2Q99929 193 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 PSMG3Q9BT73 122 aaPredicted RBP9.72□□□□□ -0.85
TOP3A-205ENST00000477508 CLEC5AQ9NY25 188 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 TMEM14CQ9P0S9 112 aa9.72□□□□□ -0.85
TOP3A-205ENST00000477508 A0A0D9SG52 128 aa9.71□□□□□ -0.86
TOP3A-205ENST00000477508 SMLR1H3BR10 107 aa9.71□□□□□ -0.86
TOP3A-205ENST00000477508 MRPS12O15235 138 aaKnown RBP9.71□□□□□ -0.86
TOP3A-205ENST00000477508 MBP02144 154 aa9.71□□□□□ -0.86
TOP3A-205ENST00000477508 RHOBP62745 196 aa9.71□□□□□ -0.86
TOP3A-205ENST00000477508 SERF2P84101 59 aa9.71□□□□□ -0.86
TOP3A-205ENST00000477508 OR2G3Q8NGZ4 309 aa9.71□□□□□ -0.86
TOP3A-205ENST00000477508 LRRC20Q8TCA0 184 aa9.71□□□□□ -0.86
TOP3A-205ENST00000477508 ST6GAL2Q96JF0 529 aa9.71□□□□□ -0.86
TOP3A-205ENST00000477508 LINC00052Q96N35 136 aa9.71□□□□□ -0.86
TOP3A-205ENST00000477508 TM2D3Q9BRN9 247 aa9.71□□□□□ -0.86
TOP3A-205ENST00000477508 HRH4Q9H3N8 390 aa9.71□□□□□ -0.86
TOP3A-205ENST00000477508 RPRMQ9NS64 109 aa9.71□□□□□ -0.86
TOP3A-205ENST00000477508 IGLC2P0DOY2 106 aa9.7□□□□□ -0.86
TOP3A-205ENST00000477508 M6PRP20645 277 aa9.7□□□□□ -0.86
TOP3A-205ENST00000477508 TAS2R45P59539 299 aa9.7□□□□□ -0.86
TOP3A-205ENST00000477508 GCSAMLQ5JQS6 135 aa9.7□□□□□ -0.86
TOP3A-205ENST00000477508 MORN5Q5VZ52 161 aa9.7□□□□□ -0.86
TOP3A-205ENST00000477508 KCNRGQ8N5I3 272 aa9.7□□□□□ -0.86
TOP3A-205ENST00000477508 HSD17B11Q8NBQ5 300 aa9.7□□□□□ -0.86
TOP3A-205ENST00000477508 SPATA25Q9BR10 227 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms