RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 KHDC1LQ5JSQ8 128 aa13.06□□□□□ -0.32
EPHB4-204ENST00000477446 C10orf113Q5VZT2 155 aa13.06□□□□□ -0.32
EPHB4-204ENST00000477446 ZNF491Q8N8L2 437 aa13.06□□□□□ -0.32
EPHB4-204ENST00000477446 TMEM37Q8WXS4 190 aa13.06□□□□□ -0.32
EPHB4-204ENST00000477446 SAV1Q9H4B6 383 aaPredicted RBP13.06□□□□□ -0.32
EPHB4-204ENST00000477446 YTHDF2Q9Y5A9 579 aaKnown RBP13.06□□□□□ -0.32
EPHB4-204ENST00000477446 TSSC4Q9Y5U2 329 aaPredicted RBP13.06□□□□□ -0.32
EPHB4-204ENST00000477446 GATA2P23769 480 aaPredicted RBP13.05□□□□□ -0.32
EPHB4-204ENST00000477446 MFAP2P55001 183 aa13.05□□□□□ -0.32
EPHB4-204ENST00000477446 KLK9Q2XQG4 91 aa13.05□□□□□ -0.32
EPHB4-204ENST00000477446 FAM210BQ96KR6 192 aa13.05□□□□□ -0.32
EPHB4-204ENST00000477446 KLK9Q9UKQ9 250 aa13.05□□□□□ -0.32
EPHB4-204ENST00000477446 IGLV11-55A0A075B6I3 123 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 A0A1W2PRX2 142 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 ADARB2-AS1A8MUL3 147 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 C9JCJ5 164 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 OR7C2O60412 319 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 OR2J3O76001 311 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 PLP1P60201 277 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 RHOGP84095 191 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 ZNF343Q6P1L6 599 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 C18orf65Q6ZTR6 163 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 LINC01551Q86U37 167 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 NDUFA11Q86Y39 141 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 ZFP82Q8N141 532 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 OR51G1Q8NGK1 321 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 OR4X1Q8NH49 305 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 SPATA3Q8NHX4 192 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 UBE2E2Q96LR5 201 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 IMMP2LQ96T52 175 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 URGCP-MRPS24S4R325 110 aa13.04□□□□□ -0.32
EPHB4-204ENST00000477446 FABP1P07148 127 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 PFN1P07737 140 aaKnown RBP13.03□□□□□ -0.32
EPHB4-204ENST00000477446 CXCL1P09341 107 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 HIST1H1BP16401 226 aaKnown RBP13.03□□□□□ -0.32
EPHB4-204ENST00000477446 CDX1P47902 265 aaPredicted RBP13.03□□□□□ -0.32
EPHB4-204ENST00000477446 NSUN5P1Q3KNT7 163 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 NECAP1Q8NC96 275 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 PYGO2Q9BRQ0 406 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 FBXL7Q9UJT9 491 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 TGIF2-C20orf24A0A0A6YYL0 155 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 C5orf52A6NGY3 159 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 FAM223BA6NKX1 122 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 NDUFB8O95169 186 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 FAM223AQ8IWN6 122 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 C2CD4CQ8TF44 421 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 ZNF503Q96F45 646 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 USMG5Q96IX5 58 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 FAM167A-AS1Q96KT0 104 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 TCEAL7Q9BRU2 100 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 GNB4Q9HAV0 340 aa13.03□□□□□ -0.32
EPHB4-204ENST00000477446 A0A0G2JLM5 398 aa13.02□□□□□ -0.33
EPHB4-204ENST00000477446 SCO2A0A1W2PP80 73 aa13.02□□□□□ -0.33
EPHB4-204ENST00000477446 IGHV3-11P01762 117 aa13.02□□□□□ -0.33
EPHB4-204ENST00000477446 GALR1P47211 349 aa13.02□□□□□ -0.33
EPHB4-204ENST00000477446 ZNF90Q03938 601 aa13.02□□□□□ -0.33
EPHB4-204ENST00000477446 C15orf32Q32M92 178 aa13.02□□□□□ -0.33
EPHB4-204ENST00000477446 KCNIP4Q6PIL6 250 aa13.02□□□□□ -0.33
EPHB4-204ENST00000477446 THYN1Q9P016 225 aa13.02□□□□□ -0.33
EPHB4-204ENST00000477446 I3L2K1 104 aa13.01□□□□□ -0.33
EPHB4-204ENST00000477446 ATP5G2Q06055 141 aa13.01□□□□□ -0.33
EPHB4-204ENST00000477446 PATE2Q6UY27 113 aa13.01□□□□□ -0.33
EPHB4-204ENST00000477446 KLHL30-AS1Q8NEE0 82 aa13.01□□□□□ -0.33
EPHB4-204ENST00000477446 TMEM190Q8WZ59 177 aa13.01□□□□□ -0.33
EPHB4-204ENST00000477446 PAXXQ9BUH6 204 aa13.01□□□□□ -0.33
EPHB4-204ENST00000477446 SLC25A2Q9BXI2 301 aa13.01□□□□□ -0.33
EPHB4-204ENST00000477446 OR51M1Q9H341 326 aa13.01□□□□□ -0.33
EPHB4-204ENST00000477446 MRPL36Q9P0J6 103 aaKnown RBP13.01□□□□□ -0.33
EPHB4-204ENST00000477446 HYPMO75409 117 aa13□□□□□ -0.33
EPHB4-204ENST00000477446 C4orf3Q8WVX3 66 aa13□□□□□ -0.33
EPHB4-204ENST00000477446 SRD5A3Q9H8P0 318 aa13□□□□□ -0.33
EPHB4-204ENST00000477446 S4R3C0 116 aa13□□□□□ -0.33
EPHB4-204ENST00000477446 HELTA6NFD8 242 aa12.99□□□□□ -0.33
EPHB4-204ENST00000477446 UBE2CO00762 179 aa12.99□□□□□ -0.33
EPHB4-204ENST00000477446 SNRPEP62304 92 aaKnown RBP12.99□□□□□ -0.33
EPHB4-204ENST00000477446 UBE2L3P68036 154 aaKnown RBP12.99□□□□□ -0.33
EPHB4-204ENST00000477446 C8orf86Q6ZUL3 223 aa12.99□□□□□ -0.33
EPHB4-204ENST00000477446 TRAV30A0A087WSZ9 112 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 IGHV3-21A0A0B4J1V1 117 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 K7EIM0 57 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 LGALS1P09382 135 aaKnown RBP12.98□□□□□ -0.33
EPHB4-204ENST00000477446 DEFB136Q30KP8 78 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 LINC00305Q7Z4B0 112 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 S100A7AQ86SG5 101 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 SFRP2Q96HF1 295 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 DERL1Q9BUN8 251 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 GGCTO75223 188 aaKnown RBP12.98□□□□□ -0.33
EPHB4-204ENST00000477446 IGHV3-48P01763 117 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 IGHV3-23P01764 117 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 IGLC1P0CG04 106 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 TAS2R60P59551 318 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 OCC1Q8TAD7 63 aa12.98□□□□□ -0.33
EPHB4-204ENST00000477446 ANK2Q01484 3957 aa12.97□□□□□ -0.33
EPHB4-204ENST00000477446 PPP5D1E7EU14 171 aa12.97□□□□□ -0.33
EPHB4-204ENST00000477446 ORM2P19652 201 aa12.97□□□□□ -0.33
EPHB4-204ENST00000477446 RPL35P42766 123 aaKnown RBP12.97□□□□□ -0.33
EPHB4-204ENST00000477446 SUMO1P63165 101 aaKnown RBP12.97□□□□□ -0.33
EPHB4-204ENST00000477446 OR10G8Q8NGN5 311 aa12.97□□□□□ -0.33
EPHB4-204ENST00000477446 OR1B1Q8NGR6 318 aa12.97□□□□□ -0.33
EPHB4-204ENST00000477446 VN1R17PQ8TDU5 208 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms