RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 IGLV1-51P01701 117 aa1.56□□□□□ -2.16
VPS50-212ENST00000476413 CSN2P05814 226 aa1.56□□□□□ -2.16
VPS50-212ENST00000476413 CRYBA4P53673 196 aa1.56□□□□□ -2.16
VPS50-212ENST00000476413 EIF5AL1Q6IS14 154 aaKnown RBP1.56□□□□□ -2.16
VPS50-212ENST00000476413 C4orf3Q8WVX3 66 aa1.56□□□□□ -2.16
VPS50-212ENST00000476413 GID8Q9NWU2 228 aa1.56□□□□□ -2.16
VPS50-212ENST00000476413 ASB4Q9Y574 426 aa1.56□□□□□ -2.16
VPS50-212ENST00000476413 LAMB4A4D0S4 1761 aa1.56□□□□□ -2.16
VPS50-212ENST00000476413 UHRF1BP1Q6BDS2 1440 aa1.56□□□□□ -2.16
VPS50-212ENST00000476413 N4BP2Q86UW6 1770 aaPredicted RBP1.55□□□□□ -2.16
VPS50-212ENST00000476413 TRGC2P03986 189 aa1.55□□□□□ -2.16
VPS50-212ENST00000476413 MYL5Q02045 173 aa1.55□□□□□ -2.16
VPS50-212ENST00000476413 ZHX1-C8orf76Q96EF9 292 aa1.55□□□□□ -2.16
VPS50-212ENST00000476413 LINC00526Q96FQ7 95 aa1.55□□□□□ -2.16
VPS50-212ENST00000476413 POPDC3Q9HBV1 291 aa1.55□□□□□ -2.16
VPS50-212ENST00000476413 ROS1P08922 2347 aa1.55□□□□□ -2.16
VPS50-212ENST00000476413 CCL16O15467 120 aa1.54□□□□□ -2.16
VPS50-212ENST00000476413 CXCL1P09341 107 aa1.54□□□□□ -2.16
VPS50-212ENST00000476413 S100A5P33763 92 aa1.54□□□□□ -2.16
VPS50-212ENST00000476413 C1orf134Q5TEV5 83 aa1.54□□□□□ -2.16
VPS50-212ENST00000476413 KRTAP26-1Q6PEX3 210 aa1.54□□□□□ -2.16
VPS50-212ENST00000476413 NEK7Q8TDX7 302 aa1.54□□□□□ -2.16
VPS50-212ENST00000476413 PBDC1Q9BVG4 233 aa1.54□□□□□ -2.16
VPS50-212ENST00000476413 BOLA2Q9H3K6 86 aa1.54□□□□□ -2.16
VPS50-212ENST00000476413 LY96Q9Y6Y9 160 aa1.54□□□□□ -2.16
VPS50-212ENST00000476413 TLCD2A6NGC4 264 aa1.53□□□□□ -2.16
VPS50-212ENST00000476413 E5RI56 91 aa1.53□□□□□ -2.16
VPS50-212ENST00000476413 E7EUB6 86 aa1.53□□□□□ -2.16
VPS50-212ENST00000476413 ARPP19P56211 112 aa1.53□□□□□ -2.16
VPS50-212ENST00000476413 DSCR4P56555 118 aaPredicted RBP1.53□□□□□ -2.16
VPS50-212ENST00000476413 MPV17LQ2QL34 196 aa1.53□□□□□ -2.16
VPS50-212ENST00000476413 GDF5OSQ5U4N7 250 aa1.53□□□□□ -2.16
VPS50-212ENST00000476413 ST6GALNAC3Q8NDV1 305 aa1.53□□□□□ -2.16
VPS50-212ENST00000476413 CASP8AP2Q9UKL3 1982 aa1.53□□□□□ -2.16
VPS50-212ENST00000476413 TRPM1Q7Z4N2 1603 aa1.52□□□□□ -2.17
VPS50-212ENST00000476413 ZNF25P17030 456 aaPredicted RBP1.52□□□□□ -2.17
VPS50-212ENST00000476413 OGNP20774 298 aaKnown RBP1.52□□□□□ -2.17
VPS50-212ENST00000476413 GLRXP35754 106 aa1.52□□□□□ -2.17
VPS50-212ENST00000476413 ZNF833PQ6ZTB9 187 aa1.52□□□□□ -2.17
VPS50-212ENST00000476413 GRINAQ7Z429 371 aa1.52□□□□□ -2.17
VPS50-212ENST00000476413 NUP35Q8NFH5 326 aa1.52□□□□□ -2.17
VPS50-212ENST00000476413 MALSU1Q96EH3 234 aa1.52□□□□□ -2.17
VPS50-212ENST00000476413 MRPL57Q9BQC6 102 aaKnown RBP1.52□□□□□ -2.17
VPS50-212ENST00000476413 TAS2R7Q9NYW3 318 aa1.52□□□□□ -2.17
VPS50-212ENST00000476413 ALPK3Q96L96 1907 aa1.52□□□□□ -2.17
VPS50-212ENST00000476413 TNS3Q68CZ2 1445 aa1.51□□□□□ -2.17
VPS50-212ENST00000476413 CD109Q6YHK3 1445 aa1.51□□□□□ -2.17
VPS50-212ENST00000476413 CCL25O15444 150 aa1.51□□□□□ -2.17
VPS50-212ENST00000476413 TMBIM6P55061 237 aa1.51□□□□□ -2.17
VPS50-212ENST00000476413 MSMO1Q15800 293 aa1.51□□□□□ -2.17
VPS50-212ENST00000476413 LTC4SQ16873 150 aa1.51□□□□□ -2.17
VPS50-212ENST00000476413 SPRNQ5BIV9 151 aa1.51□□□□□ -2.17
VPS50-212ENST00000476413 C4orf22Q6V702 233 aa1.51□□□□□ -2.17
VPS50-212ENST00000476413 OR5D14Q8NGL3 314 aa1.51□□□□□ -2.17
VPS50-212ENST00000476413 POP5Q969H6 163 aaKnown RBP1.51□□□□□ -2.17
VPS50-212ENST00000476413 PLEKHB2Q96CS7 222 aa1.51□□□□□ -2.17
VPS50-212ENST00000476413 CARD19Q96LW7 228 aa1.51□□□□□ -2.17
VPS50-212ENST00000476413 TP53RKQ96S44 253 aa1.51□□□□□ -2.17
VPS50-212ENST00000476413 HEATR1Q9H583 2144 aaKnown RBP1.51□□□□□ -2.17
VPS50-212ENST00000476413 A0A087WSZ3 146 aa1.5□□□□□ -2.17
VPS50-212ENST00000476413 TRAV10A0A0B4J240 114 aa1.5□□□□□ -2.17
VPS50-212ENST00000476413 TRBV6-4A0A1B0GX49 114 aa1.5□□□□□ -2.17
VPS50-212ENST00000476413 ODAMA1E959 279 aa1.5□□□□□ -2.17
VPS50-212ENST00000476413 APOA2P02652 100 aa1.5□□□□□ -2.17
VPS50-212ENST00000476413 TMEM70Q9BUB7 260 aa1.5□□□□□ -2.17
VPS50-212ENST00000476413 SYNMO15061 1565 aa1.5□□□□□ -2.17
VPS50-212ENST00000476413 MYLKQ15746 1914 aa1.49□□□□□ -2.17
VPS50-212ENST00000476413 K7ERJ3 54 aa1.49□□□□□ -2.17
VPS50-212ENST00000476413 IFNA14P01570 189 aa1.49□□□□□ -2.17
VPS50-212ENST00000476413 CD2P06729 351 aa1.49□□□□□ -2.17
VPS50-212ENST00000476413 TCTAP57738 103 aa1.49□□□□□ -2.17
VPS50-212ENST00000476413 C1orf140Q5VVS0 124 aa1.49□□□□□ -2.17
VPS50-212ENST00000476413 OR5D16Q8NGK9 328 aa1.49□□□□□ -2.17
VPS50-212ENST00000476413 PPTC7Q8NI37 304 aa1.49□□□□□ -2.17
VPS50-212ENST00000476413 Q8TAT8 98 aa1.49□□□□□ -2.17
VPS50-212ENST00000476413 LINC00052Q96N35 136 aa1.49□□□□□ -2.17
VPS50-212ENST00000476413 BIN3Q9NQY0 253 aa1.49□□□□□ -2.17
VPS50-212ENST00000476413 RNF11Q9Y3C5 154 aa1.49□□□□□ -2.17
VPS50-212ENST00000476413 C17orf112F2Z3M2 114 aa1.48□□□□□ -2.17
VPS50-212ENST00000476413 OR10J4P0C629 311 aa1.48□□□□□ -2.17
VPS50-212ENST00000476413 STX19Q8N4C7 294 aa1.48□□□□□ -2.17
VPS50-212ENST00000476413 RTL8AQ9BWD3 113 aa1.48□□□□□ -2.17
VPS50-212ENST00000476413 OR52A1Q9UKL2 312 aa1.48□□□□□ -2.17
VPS50-212ENST00000476413 ADGBQ8N7X0 1667 aa1.48□□□□□ -2.17
VPS50-212ENST00000476413 SERPINB1P30740 379 aa1.47□□□□□ -2.17
VPS50-212ENST00000476413 CDK6Q00534 326 aa1.47□□□□□ -2.17
VPS50-212ENST00000476413 DEFB115Q30KQ5 88 aa1.47□□□□□ -2.17
VPS50-212ENST00000476413 FAM74A1Q5RGS3 127 aa1.47□□□□□ -2.17
VPS50-212ENST00000476413 FKBP1CQ5VVH2 108 aa1.47□□□□□ -2.17
VPS50-212ENST00000476413 TRIQKQ629K1 86 aa1.47□□□□□ -2.17
VPS50-212ENST00000476413 C3orf33Q6P1S2 294 aa1.47□□□□□ -2.17
VPS50-212ENST00000476413 PHF5AQ7RTV0 110 aaKnown RBP1.47□□□□□ -2.17
VPS50-212ENST00000476413 OR4K15Q8NH41 348 aa1.47□□□□□ -2.17
VPS50-212ENST00000476413 RAB37Q96AX2 223 aa1.47□□□□□ -2.17
VPS50-212ENST00000476413 CHCHD1Q96BP2 118 aaKnown RBP1.47□□□□□ -2.17
VPS50-212ENST00000476413 GGACTQ9BVM4 153 aa1.47□□□□□ -2.17
VPS50-212ENST00000476413 CACYBPQ9HB71 228 aaKnown RBP1.47□□□□□ -2.17
VPS50-212ENST00000476413 FRMPD1Q5SYB0 1578 aa1.47□□□□□ -2.17
VPS50-212ENST00000476413 ROCK1Q13464 1354 aa1.47□□□□□ -2.17
VPS50-212ENST00000476413 COL24A1Q17RW2 1714 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms