RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 OR5G3P0C626 314 aa15.35■□□□□ 0.05
LIME1-204ENST00000476183 RAP2BP61225 183 aa15.35■□□□□ 0.05
LIME1-204ENST00000476183 FOXI2Q6ZQN5 318 aa15.35■□□□□ 0.05
LIME1-204ENST00000476183 C16orf92Q96LL3 132 aa15.35■□□□□ 0.05
LIME1-204ENST00000476183 MGST2Q99735 147 aa15.35■□□□□ 0.05
LIME1-204ENST00000476183 ARL6Q9H0F7 186 aa15.35■□□□□ 0.05
LIME1-204ENST00000476183 F6UB75 175 aa15.34■□□□□ 0.05
LIME1-204ENST00000476183 SIX6O95475 246 aa15.34■□□□□ 0.05
LIME1-204ENST00000476183 IGKV3-20P01619 116 aa15.34■□□□□ 0.05
LIME1-204ENST00000476183 RBMY1A1P0DJD3 496 aaKnown RBP15.34■□□□□ 0.05
LIME1-204ENST00000476183 RBMY1CP0DJD4 496 aa15.34■□□□□ 0.05
LIME1-204ENST00000476183 S100A7P31151 101 aa15.34■□□□□ 0.05
LIME1-204ENST00000476183 MEOX2P50222 304 aa15.34■□□□□ 0.05
LIME1-204ENST00000476183 NANOS2P60321 138 aaKnown RBP15.34■□□□□ 0.05
LIME1-204ENST00000476183 RBMY1FQ15415 496 aaKnown RBP15.34■□□□□ 0.05
LIME1-204ENST00000476183 CEMP1Q6PRD7 247 aaPredicted RBP15.34■□□□□ 0.05
LIME1-204ENST00000476183 GPR82Q96P67 336 aa15.34■□□□□ 0.05
LIME1-204ENST00000476183 GPN1Q9HCN4 374 aaPredicted RBP15.34■□□□□ 0.05
LIME1-204ENST00000476183 LYRM2Q9NU23 88 aaPredicted RBP15.34■□□□□ 0.05
LIME1-204ENST00000476183 XCL2Q9UBD3 114 aa15.34■□□□□ 0.05
LIME1-204ENST00000476183 IGHV4-28A0A0C4DH34 117 aa15.33■□□□□ 0.04
LIME1-204ENST00000476183 IGSF23A1L1A6 192 aa15.33■□□□□ 0.04
LIME1-204ENST00000476183 NUPR2A6NF83 97 aa15.33■□□□□ 0.04
LIME1-204ENST00000476183 INMT-MINDY4F8WBC2 141 aa15.33■□□□□ 0.04
LIME1-204ENST00000476183 PVALBP20472 110 aaPredicted RBP15.33■□□□□ 0.04
LIME1-204ENST00000476183 SAMD13Q5VXD3 122 aa15.33■□□□□ 0.04
LIME1-204ENST00000476183 IGFL4Q6B9Z1 124 aa15.33■□□□□ 0.04
LIME1-204ENST00000476183 ZNF546Q86UE3 836 aa15.33■□□□□ 0.04
LIME1-204ENST00000476183 TRAV8-2A0A0B4J237 113 aa15.32■□□□□ 0.04
LIME1-204ENST00000476183 GOSR2O14653 212 aa15.32■□□□□ 0.04
LIME1-204ENST00000476183 JTBO76095 146 aa15.32■□□□□ 0.04
LIME1-204ENST00000476183 FXYD7P58549 80 aa15.32■□□□□ 0.04
LIME1-204ENST00000476183 NUTF2P61970 127 aaKnown RBP15.32■□□□□ 0.04
LIME1-204ENST00000476183 TMEM252Q8N6L7 170 aa15.32■□□□□ 0.04
LIME1-204ENST00000476183 C11orf45Q8TAV5 145 aa15.32■□□□□ 0.04
LIME1-204ENST00000476183 ARV1Q9H2C2 271 aa15.32■□□□□ 0.04
LIME1-204ENST00000476183 MIFP14174 115 aa15.31■□□□□ 0.04
LIME1-204ENST00000476183 RPL7P18124 248 aaKnown RBP15.31■□□□□ 0.04
LIME1-204ENST00000476183 SULT1A1P50225 295 aa15.31■□□□□ 0.04
LIME1-204ENST00000476183 ZNF709Q8N972 641 aa15.31■□□□□ 0.04
LIME1-204ENST00000476183 OR4B1Q8NGF8 309 aa15.31■□□□□ 0.04
LIME1-204ENST00000476183 PHLDA1Q8WV24 401 aaPredicted RBP15.31■□□□□ 0.04
LIME1-204ENST00000476183 CLUHP3Q96NS8 147 aa15.31■□□□□ 0.04
LIME1-204ENST00000476183 MARVELD1Q9BSK0 173 aa15.31■□□□□ 0.04
LIME1-204ENST00000476183 C1QTNF4Q9BXJ3 329 aa15.31■□□□□ 0.04
LIME1-204ENST00000476183 A0A0J9YX75 114 aa15.3■□□□□ 0.04
LIME1-204ENST00000476183 PRAF2O60831 178 aa15.3■□□□□ 0.04
LIME1-204ENST00000476183 FGL1Q08830 312 aa15.3■□□□□ 0.04
LIME1-204ENST00000476183 VWC2Q2TAL6 325 aa15.3■□□□□ 0.04
LIME1-204ENST00000476183 PXDC1Q5TGL8 231 aa15.3■□□□□ 0.04
LIME1-204ENST00000476183 FAM78BQ5VT40 261 aa15.3■□□□□ 0.04
LIME1-204ENST00000476183 EBLN2Q6P2I7 272 aa15.3■□□□□ 0.04
LIME1-204ENST00000476183 RNF182Q8N6D2 247 aa15.3■□□□□ 0.04
LIME1-204ENST00000476183 TMEM37Q8WXS4 190 aa15.3■□□□□ 0.04
LIME1-204ENST00000476183 RPRMQ9NS64 109 aa15.3■□□□□ 0.04
LIME1-204ENST00000476183 UQCC1Q9NVA1 299 aa15.3■□□□□ 0.04
LIME1-204ENST00000476183 WDR83OSQ9Y284 106 aa15.3■□□□□ 0.04
LIME1-204ENST00000476183 ELOA3CA0A087WX78 387 aaPredicted RBP15.29■□□□□ 0.04
LIME1-204ENST00000476183 MRPS12O15235 138 aaKnown RBP15.29■□□□□ 0.04
LIME1-204ENST00000476183 CAMLGP49069 296 aa15.29■□□□□ 0.04
LIME1-204ENST00000476183 SPATA31B1PQ5VZV4 182 aa15.29■□□□□ 0.04
LIME1-204ENST00000476183 SLC35B3Q9H1N7 401 aa15.29■□□□□ 0.04
LIME1-204ENST00000476183 A0A087X0K7 114 aa15.28■□□□□ 0.04
LIME1-204ENST00000476183 S100A11P31949 105 aa15.28■□□□□ 0.04
LIME1-204ENST00000476183 DEFA1P59665 94 aa15.28■□□□□ 0.04
LIME1-204ENST00000476183 DEFA3P59666 94 aa15.28■□□□□ 0.04
LIME1-204ENST00000476183 MORN5Q5VZ52 161 aa15.28■□□□□ 0.04
LIME1-204ENST00000476183 MIC13Q5XKP0 118 aa15.28■□□□□ 0.04
LIME1-204ENST00000476183 LINC00305Q7Z4B0 112 aa15.28■□□□□ 0.04
LIME1-204ENST00000476183 NMES1Q9C002 83 aa15.28■□□□□ 0.04
LIME1-204ENST00000476183 UBE2L5PA0A1B0GUS4 154 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 A8MTW9 85 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 HLA-DMBP28068 263 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 PRR20EP86478 221 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 PRR20CP86479 221 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 PRR20DP86480 221 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 PRR20BP86481 221 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 PRR20AP86496 221 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 PSG9Q00887 426 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 ZNF705AQ6ZN79 300 aaPredicted RBP15.27■□□□□ 0.04
LIME1-204ENST00000476183 S100A7AQ86SG5 101 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 STX12Q86Y82 276 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 MFFQ9GZY8 342 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 OR5AC2Q9NZP5 309 aa15.27■□□□□ 0.04
LIME1-204ENST00000476183 H0YIZ8 118 aa15.26■□□□□ 0.03
LIME1-204ENST00000476183 COX7A2P2O60397 106 aa15.26■□□□□ 0.03
LIME1-204ENST00000476183 H2BFSP57053 126 aa15.26■□□□□ 0.03
LIME1-204ENST00000476183 AMTNQ6UX39 209 aa15.26■□□□□ 0.03
LIME1-204ENST00000476183 HRH4Q9H3N8 390 aa15.26■□□□□ 0.03
LIME1-204ENST00000476183 KLK5Q9Y337 293 aaPredicted RBP15.26■□□□□ 0.03
LIME1-204ENST00000476183 SNRPCP09234 159 aaKnown RBP15.25■□□□□ 0.03
LIME1-204ENST00000476183 ZNF705DP0CH99 300 aaPredicted RBP15.25■□□□□ 0.03
LIME1-204ENST00000476183 ZNF705BP0CI00 300 aaPredicted RBP15.25■□□□□ 0.03
LIME1-204ENST00000476183 HBG1P69891 147 aa15.25■□□□□ 0.03
LIME1-204ENST00000476183 HBG2P69892 147 aa15.25■□□□□ 0.03
LIME1-204ENST00000476183 NHLH2Q02577 135 aa15.25■□□□□ 0.03
LIME1-204ENST00000476183 RAB31Q13636 194 aa15.25■□□□□ 0.03
LIME1-204ENST00000476183 LRRC37A5PQ49AS3 106 aa15.25■□□□□ 0.03
LIME1-204ENST00000476183 LINC00476Q8WZB0 136 aa15.25■□□□□ 0.03
LIME1-204ENST00000476183 ZNF705FA8MVS1 300 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms