RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 F5H768 121 aa7.62□□□□□ -1.19
CDRT1-205ENST00000475944 CRXO43186 299 aaPredicted RBP7.62□□□□□ -1.19
CDRT1-205ENST00000475944 CDK2AP2O75956 126 aa7.62□□□□□ -1.19
CDRT1-205ENST00000475944 ATP5G1P05496 136 aa7.62□□□□□ -1.19
CDRT1-205ENST00000475944 FAUP35544 74 aaKnown RBP7.62□□□□□ -1.19
CDRT1-205ENST00000475944 ATP5G3P48201 142 aa7.62□□□□□ -1.19
CDRT1-205ENST00000475944 AKR1C1Q04828 323 aa7.62□□□□□ -1.19
CDRT1-205ENST00000475944 TNP2Q05952 138 aa7.62□□□□□ -1.19
CDRT1-205ENST00000475944 TMEM128Q5BJH2 165 aa7.62□□□□□ -1.19
CDRT1-205ENST00000475944 TMED4Q7Z7H5 227 aa7.62□□□□□ -1.19
CDRT1-205ENST00000475944 BAP18Q8IXM2 172 aa7.62□□□□□ -1.19
CDRT1-205ENST00000475944 C6orf223Q8N319 242 aa7.62□□□□□ -1.19
CDRT1-205ENST00000475944 ZNRF2Q8NHG8 242 aa7.62□□□□□ -1.19
CDRT1-205ENST00000475944 MRPS26Q9BYN8 205 aaKnown RBP7.62□□□□□ -1.19
CDRT1-205ENST00000475944 KRTAP4-5Q9BYR2 181 aa7.62□□□□□ -1.19
CDRT1-205ENST00000475944 CCDC59Q9P031 241 aaKnown RBP7.62□□□□□ -1.19
CDRT1-205ENST00000475944 PRSS46E5RG02 174 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 BOLA2-SMG1P6H3BVE0 249 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 WRBO00258 174 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 SYNGR2O43760 224 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 NUDT3O95989 172 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 VAMP1P23763 118 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 GATA2P23769 480 aaPredicted RBP7.61□□□□□ -1.19
CDRT1-205ENST00000475944 CCL18P55774 89 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 RAP2BP61225 183 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 FGL1Q08830 312 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 TMEM256Q8N2U0 113 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 LRTM2Q8N967 370 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 ZNF738Q8NE65 137 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 C17orf77Q96MU5 243 aa7.61□□□□□ -1.19
CDRT1-205ENST00000475944 TRAV8-2A0A0B4J237 113 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 FABP12A6NFH5 140 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 CBY3A6NI87 242 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 H3BRN7 92 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 PRM2P04554 102 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 RPL7P18124 248 aaKnown RBP7.6□□□□□ -1.19
CDRT1-205ENST00000475944 AP3S2P59780 193 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 RHOBP62745 196 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 SPANXN5Q5MJ07 72 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 IGFL4Q6B9Z1 124 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 ACOT7LQ6ZUV0 252 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 RNF182Q8N6D2 247 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 DYNC2LI1Q8TCX1 351 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 RAB2BQ8WUD1 216 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 SLC25A39Q9BZJ4 359 aaPredicted RBP7.6□□□□□ -1.19
CDRT1-205ENST00000475944 PPP1R14DQ9NXH3 145 aa7.6□□□□□ -1.19
CDRT1-205ENST00000475944 STRAPQ9Y3F4 350 aaKnown RBP7.6□□□□□ -1.19
CDRT1-205ENST00000475944 TRAV12-2A0A075B6T6 113 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 PLAC8L1A1L4L8 177 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 SMCO3A2RU48 225 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 IL5P05113 134 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 AZU1P20160 251 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 TAS2R60P59551 318 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 HIST1H1AQ02539 215 aaPredicted RBP7.59□□□□□ -1.19
CDRT1-205ENST00000475944 CLINT1Q14677 625 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 TMEM182Q6ZP80 229 aaPredicted RBP7.59□□□□□ -1.19
CDRT1-205ENST00000475944 CYP2G1PQ6ZSU1 146 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 TMEM144Q7Z5S9 345 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 S100A7AQ86SG5 101 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 MAPKAPK5-AS1Q8N8E1 139 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 C16orf74Q96GX8 76 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 LINC01587Q99440 93 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 BCL7BQ9BQE9 202 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 SLC25A21Q9BQT8 299 aaPredicted RBP7.59□□□□□ -1.19
CDRT1-205ENST00000475944 SHANK2-AS3Q9BTD1 123 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 HIGD1AQ9Y241 93 aa7.59□□□□□ -1.19
CDRT1-205ENST00000475944 TIMM8BQ9Y5J9 83 aaPredicted RBP7.59□□□□□ -1.19
CDRT1-205ENST00000475944 RYR1P21817 5038 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 H3BP45 60 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 HTN1P15515 57 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 TNFSF8P32971 234 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 TMBIM6P55061 237 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 FCN2Q15485 313 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 ZNF493Q6ZR52 646 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 TOMM5Q8N4H5 51 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 OR8A1Q8NGG7 326 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 LRRC20Q8TCA0 184 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 RNF141Q8WVD5 230 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 SOSTQ9BQB4 213 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 RNF24Q9Y225 148 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 LINC00588Q9Y4M8 146 aa7.58□□□□□ -1.2
CDRT1-205ENST00000475944 A0A087X0K7 114 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 NOL3O60936 208 aaKnown RBP7.57□□□□□ -1.2
CDRT1-205ENST00000475944 HYPMO75409 117 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 SFT2D2O95562 160 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 HOXB5P09067 269 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 OR5G3P0C626 314 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 LINC00869P0C866 280 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 CXCL3P19876 107 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 CDKN1BP46527 198 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 PLP1P60201 277 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 SELENOTP62341 195 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 PPP1R1AQ13522 171 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 PSG3Q16557 428 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 TTC32Q5I0X7 151 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 SSX7Q7RTT5 188 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 OR10J6PQ8NGY7 276 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 DEDD2Q8WXF8 326 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 TRIM63Q969Q1 353 aa7.57□□□□□ -1.2
CDRT1-205ENST00000475944 SLIRPQ9GZT3 109 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms