RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 PRR20DP86480 221 aa11.94□□□□□ -0.5
SRM-204ENST00000475189 PRR20BP86481 221 aa11.94□□□□□ -0.5
SRM-204ENST00000475189 PRR20AP86496 221 aa11.94□□□□□ -0.5
SRM-204ENST00000475189 OVOL2Q9BRP0 275 aa11.94□□□□□ -0.5
SRM-204ENST00000475189 RSG1Q9BU20 258 aa11.94□□□□□ -0.5
SRM-204ENST00000475189 DNAH7Q8WXX0 4024 aa11.94□□□□□ -0.5
SRM-204ENST00000475189 KNCNA6PVL3 124 aa11.93□□□□□ -0.5
SRM-204ENST00000475189 RPL29P47914 159 aaKnown RBP11.93□□□□□ -0.5
SRM-204ENST00000475189 CLINT1Q14677 625 aa11.93□□□□□ -0.5
SRM-204ENST00000475189 OPCMLQ14982 345 aa11.93□□□□□ -0.5
SRM-204ENST00000475189 Q6ZWC4 215 aa11.93□□□□□ -0.5
SRM-204ENST00000475189 S100A7AQ86SG5 101 aa11.93□□□□□ -0.5
SRM-204ENST00000475189 STHQ8IWL8 128 aa11.93□□□□□ -0.5
SRM-204ENST00000475189 TMEM37Q8WXS4 190 aa11.93□□□□□ -0.5
SRM-204ENST00000475189 CSTL1Q9H114 145 aa11.93□□□□□ -0.5
SRM-204ENST00000475189 HSPB11Q9Y547 144 aa11.93□□□□□ -0.5
SRM-204ENST00000475189 COX7A2P2O60397 106 aa11.92□□□□□ -0.5
SRM-204ENST00000475189 MPDU1O75352 247 aa11.92□□□□□ -0.5
SRM-204ENST00000475189 RPL12P30050 165 aaKnown RBP11.92□□□□□ -0.5
SRM-204ENST00000475189 ID1P41134 155 aa11.92□□□□□ -0.5
SRM-204ENST00000475189 PSMB3P49720 205 aa11.92□□□□□ -0.5
SRM-204ENST00000475189 MEOX2P50222 304 aa11.92□□□□□ -0.5
SRM-204ENST00000475189 DEFB135Q30KP9 77 aa11.92□□□□□ -0.5
SRM-204ENST00000475189 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.92□□□□□ -0.5
SRM-204ENST00000475189 LINC00305Q7Z4B0 112 aa11.92□□□□□ -0.5
SRM-204ENST00000475189 TRPT1Q86TN4 253 aaKnown RBP11.92□□□□□ -0.5
SRM-204ENST00000475189 THAP6Q8TBB0 222 aa11.92□□□□□ -0.5
SRM-204ENST00000475189 ELOA3CA0A087WX78 387 aaPredicted RBP11.91□□□□□ -0.5
SRM-204ENST00000475189 ISLRO14498 428 aa11.91□□□□□ -0.5
SRM-204ENST00000475189 RPL7P18124 248 aaKnown RBP11.91□□□□□ -0.5
SRM-204ENST00000475189 B2MP61769 119 aa11.91□□□□□ -0.5
SRM-204ENST00000475189 ACTL10Q5JWF8 245 aa11.91□□□□□ -0.5
SRM-204ENST00000475189 C10orf113Q5VZT2 155 aa11.91□□□□□ -0.5
SRM-204ENST00000475189 Q6ZRG5 221 aa11.91□□□□□ -0.5
SRM-204ENST00000475189 NPCDR1Q9BY65 106 aa11.91□□□□□ -0.5
SRM-204ENST00000475189 EDA2RQ9HAV5 297 aa11.91□□□□□ -0.5
SRM-204ENST00000475189 DNAJC4Q9NNZ3 241 aa11.91□□□□□ -0.5
SRM-204ENST00000475189 SLC39A9Q9NUM3 307 aa11.91□□□□□ -0.5
SRM-204ENST00000475189 TP53TG1Q9Y2A0 90 aa11.91□□□□□ -0.5
SRM-204ENST00000475189 MRPS12O15235 138 aaKnown RBP11.9□□□□□ -0.5
SRM-204ENST00000475189 SPRY2O43597 315 aa11.9□□□□□ -0.5
SRM-204ENST00000475189 SAMD13Q5VXD3 122 aa11.9□□□□□ -0.5
SRM-204ENST00000475189 MORN5Q5VZ52 161 aa11.9□□□□□ -0.5
SRM-204ENST00000475189 OR1L4Q8NGR5 311 aa11.9□□□□□ -0.5
SRM-204ENST00000475189 RNF183Q96D59 192 aa11.9□□□□□ -0.5
SRM-204ENST00000475189 C16orf92Q96LL3 132 aa11.9□□□□□ -0.5
SRM-204ENST00000475189 LINC00052Q96N35 136 aa11.9□□□□□ -0.5
SRM-204ENST00000475189 ATP5SQ99766 215 aa11.9□□□□□ -0.5
SRM-204ENST00000475189 RNF24Q9Y225 148 aa11.9□□□□□ -0.5
SRM-204ENST00000475189 PXMP4Q9Y6I8 212 aa11.9□□□□□ -0.5
SRM-204ENST00000475189 GIPP09681 153 aaPredicted RBP11.89□□□□□ -0.51
SRM-204ENST00000475189 ATF4P18848 351 aaPredicted RBP11.89□□□□□ -0.51
SRM-204ENST00000475189 DEFB1P60022 68 aa11.89□□□□□ -0.51
SRM-204ENST00000475189 C20orf173Q96LM9 149 aa11.89□□□□□ -0.51
SRM-204ENST00000475189 WDR61Q9GZS3 305 aaKnown RBP11.89□□□□□ -0.51
SRM-204ENST00000475189 A0A087X0K7 114 aa11.88□□□□□ -0.51
SRM-204ENST00000475189 H3BMM0 161 aa11.88□□□□□ -0.51
SRM-204ENST00000475189 CA1P00915 261 aaPredicted RBP11.88□□□□□ -0.51
SRM-204ENST00000475189 GIG44P09565 113 aaPredicted RBP11.88□□□□□ -0.51
SRM-204ENST00000475189 Q5BKY6 102 aa11.88□□□□□ -0.51
SRM-204ENST00000475189 GDF5OSQ5U4N7 250 aa11.88□□□□□ -0.51
SRM-204ENST00000475189 ASB13Q8WXK3 278 aa11.88□□□□□ -0.51
SRM-204ENST00000475189 PFDN5Q99471 154 aa11.88□□□□□ -0.51
SRM-204ENST00000475189 SMIM3Q9BZL3 60 aa11.88□□□□□ -0.51
SRM-204ENST00000475189 TRAV8-2A0A0B4J237 113 aa11.87□□□□□ -0.51
SRM-204ENST00000475189 TRAV5A0A0B4J249 113 aa11.87□□□□□ -0.51
SRM-204ENST00000475189 SPP1P10451 314 aa11.87□□□□□ -0.51
SRM-204ENST00000475189 HLA-DRB4P13762 266 aa11.87□□□□□ -0.51
SRM-204ENST00000475189 FGL1Q08830 312 aa11.87□□□□□ -0.51
SRM-204ENST00000475189 IGFL4Q6B9Z1 124 aa11.87□□□□□ -0.51
SRM-204ENST00000475189 MORN3Q6PF18 240 aaPredicted RBP11.87□□□□□ -0.51
SRM-204ENST00000475189 BPIFA4PQ86YQ2 179 aa11.87□□□□□ -0.51
SRM-204ENST00000475189 GATAD1Q8WUU5 269 aa11.87□□□□□ -0.51
SRM-204ENST00000475189 SAV1Q9H4B6 383 aaPredicted RBP11.87□□□□□ -0.51
SRM-204ENST00000475189 WFDC1Q9HC57 220 aa11.87□□□□□ -0.51
SRM-204ENST00000475189 HLA-DRB4X5D2U9 266 aa11.87□□□□□ -0.51
SRM-204ENST00000475189 C4BPBP20851 252 aa11.86□□□□□ -0.51
SRM-204ENST00000475189 GCSAMLQ5JQS6 135 aa11.86□□□□□ -0.51
SRM-204ENST00000475189 FOXI2Q6ZQN5 318 aa11.86□□□□□ -0.51
SRM-204ENST00000475189 ZNF709Q8N972 641 aa11.86□□□□□ -0.51
SRM-204ENST00000475189 RPRMQ9NS64 109 aa11.86□□□□□ -0.51
SRM-204ENST00000475189 F6UB75 175 aa11.85□□□□□ -0.51
SRM-204ENST00000475189 IFNA5P01569 189 aa11.85□□□□□ -0.51
SRM-204ENST00000475189 RNF182Q8N6D2 247 aa11.85□□□□□ -0.51
SRM-204ENST00000475189 MUC7Q8TAX7 377 aa11.85□□□□□ -0.51
SRM-204ENST00000475189 PARD6GQ9BYG4 376 aaPredicted RBP11.85□□□□□ -0.51
SRM-204ENST00000475189 A0A0J9YX75 114 aa11.84□□□□□ -0.51
SRM-204ENST00000475189 C17orf112F2Z3M2 114 aa11.84□□□□□ -0.51
SRM-204ENST00000475189 SNRPCP09234 159 aaKnown RBP11.84□□□□□ -0.51
SRM-204ENST00000475189 TMEM41BQ5BJD5 291 aa11.84□□□□□ -0.51
SRM-204ENST00000475189 SPATA31B1PQ5VZV4 182 aa11.84□□□□□ -0.51
SRM-204ENST00000475189 LRRC20Q8TCA0 184 aa11.84□□□□□ -0.51
SRM-204ENST00000475189 SCGB1C1Q8TD33 95 aa11.84□□□□□ -0.51
SRM-204ENST00000475189 AQP10Q96PS8 301 aa11.84□□□□□ -0.51
SRM-204ENST00000475189 KCNIP2Q9NS61 270 aa11.84□□□□□ -0.51
SRM-204ENST00000475189 C3orf84H3BNL1 204 aa11.83□□□□□ -0.52
SRM-204ENST00000475189 H3BQ15 152 aa11.83□□□□□ -0.52
SRM-204ENST00000475189 IGKV3-20P01619 116 aa11.83□□□□□ -0.52
SRM-204ENST00000475189 IGLC2P0DOY2 106 aa11.83□□□□□ -0.52
SRM-204ENST00000475189 CXCL2P19875 107 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms