RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 ZNF705EA8MWA4 302 aaPredicted RBP6.83□□□□□ -1.32
PDPN-204ENST00000475043 L7N2F9 121 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 ISLRO14498 428 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 OR5G3P0C626 314 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 LINC00869P0C866 280 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 MEOX2P50222 304 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 PAX9P55771 341 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 FXYD7P58549 80 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 RAP2BP61225 183 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 VAMP2P63027 116 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 FGL1Q08830 312 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 SAMD13Q5VXD3 122 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 EBLN2Q6P2I7 272 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 FOXI2Q6ZQN5 318 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 CSNK1G2-AS1Q8NCQ2 148 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 SEC22CQ9BRL7 303 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 CCDC32Q9BV29 185 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 SAV1Q9H4B6 383 aaPredicted RBP6.83□□□□□ -1.32
PDPN-204ENST00000475043 NPVFQ9HCQ7 196 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 RPRMQ9NS64 109 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 MGAT4CQ9UBM8 478 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 SLC45A2Q9UMX9 530 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 X6R8D5 127 aa6.83□□□□□ -1.32
PDPN-204ENST00000475043 FAM240BA0A1B0GVZ2 78 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 C7orf66A4D0T2 115 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 F6UB75 175 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 SOCS3O14543 225 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 TSC22D2O75157 780 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 HYPMO75409 117 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 MBPP02686 304 aaPredicted RBP6.82□□□□□ -1.32
PDPN-204ENST00000475043 TAS2R30P59541 319 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 SELENOTP62341 195 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 DLK1P80370 383 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 FAM78BQ5VT40 261 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 TEPPQ6URK8 271 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 TMEM14EPQ6UXP3 125 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 ZNF431Q8TF32 576 aaPredicted RBP6.82□□□□□ -1.32
PDPN-204ENST00000475043 C2CD4CQ8TF44 421 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 GPR82Q96P67 336 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 SCRT1Q9BWW7 348 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 SLC25A39Q9BZJ4 359 aaPredicted RBP6.82□□□□□ -1.32
PDPN-204ENST00000475043 HIGD1AQ9Y241 93 aa6.82□□□□□ -1.32
PDPN-204ENST00000475043 RCL1Q9Y2P8 373 aaKnown RBP6.82□□□□□ -1.32
PDPN-204ENST00000475043 LSM5Q9Y4Y9 91 aaKnown RBP6.82□□□□□ -1.32
PDPN-204ENST00000475043 SACSQ9NZJ4 4579 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 IGLL5B9A064 214 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 C11orf94C9JXX5 98 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 GOSR2O14653 212 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 HLA-DMBP28068 263 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 BCAP31P51572 246 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 CAV2P51636 162 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 SLC38A11Q08AI6 406 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 SPATA31B1PQ5VZV4 182 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 MZT2BQ6NZ67 158 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 C12orf45Q8N5I9 185 aaPredicted RBP6.81□□□□□ -1.32
PDPN-204ENST00000475043 S100ZQ8WXG8 99 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 UHRF2Q96PU4 802 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 LYSTQ99698 3801 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 ARL6Q9H0F7 186 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 SLC35B3Q9H1N7 401 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 HRH4Q9H3N8 390 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 RYR2Q92736 4967 aa6.81□□□□□ -1.32
PDPN-204ENST00000475043 A0A0J9YX75 114 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 FNDC10F2Z333 226 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 H3BRN7 92 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 K7EPK0 472 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 RPL7P18124 248 aaKnown RBP6.8□□□□□ -1.32
PDPN-204ENST00000475043 EMP1P54849 157 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 S100A10P60903 97 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 PSG9Q00887 426 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 ARL16Q0P5N6 197 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 IGFL4Q6B9Z1 124 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 Q6ZTC4 211 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 ZNF767PQ75MW2 155 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 S100A7AQ86SG5 101 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 RNF182Q8N6D2 247 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 LRRC20Q8TCA0 184 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 C20orf173Q96LM9 149 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 C2orf50Q96LR7 162 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 SHANK2-AS3Q9BTD1 123 aa6.8□□□□□ -1.32
PDPN-204ENST00000475043 TRAV10A0A0B4J240 114 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 AGPAT2O15120 278 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 CST7O76096 145 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 PVALBP20472 110 aaPredicted RBP6.79□□□□□ -1.32
PDPN-204ENST00000475043 PLP1P60201 277 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 LGALS9CQ6DKI2 356 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 ZNF705AQ6ZN79 300 aaPredicted RBP6.79□□□□□ -1.32
PDPN-204ENST00000475043 LINC00299Q6ZSB3 139 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 ZNF546Q86UE3 836 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 ZNF709Q8N972 641 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 ZNF738Q8NE65 137 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 ENKURQ8TC29 256 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 C17orf77Q96MU5 243 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 CLUHP3Q96NS8 147 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 GGACTQ9BVM4 153 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 ARV1Q9H2C2 271 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 CELA1Q9UNI1 258 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 GOLT1BQ9Y3E0 138 aa6.79□□□□□ -1.32
PDPN-204ENST00000475043 FAM24AA6NFZ4 105 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms