RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 CLVS1Q8IUQ0 354 aaPredicted RBP5.27□□□□□ -1.57
USP54-211ENST00000474929 BEST4Q8NFU0 473 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 PRO0255Q9UI72 69 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 COX11Q9Y6N1 276 aa5.27□□□□□ -1.57
USP54-211ENST00000474929 A0A0J9YXV3 536 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 CCDC160A6NGH7 325 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 FAM25AB3EWG3 89 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 FAM25CB3EWG5 89 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 FAM25GB3EWG6 89 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 F6UB75 175 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 TMEM127O75204 238 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 ZNF324O75467 553 aaPredicted RBP5.26□□□□□ -1.57
USP54-211ENST00000474929 IGKV1-17P01599 117 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 PMP2P02689 132 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 UCP1P25874 307 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 SRIP30626 198 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 PRSS3P35030 304 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 RFX2P48378 723 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 CNN1P51911 297 aaKnown RBP5.26□□□□□ -1.57
USP54-211ENST00000474929 TAS2R20P59543 309 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 FXYD4P59646 89 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 DAZ2Q13117 558 aaKnown RBP5.26□□□□□ -1.57
USP54-211ENST00000474929 LINC01556Q5JQF7 62 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 MZT2AQ6P582 158 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 OR51H1Q8NH63 302 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 SECTM1Q8WVN6 248 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 PCNPQ8WW12 178 aaKnown RBP5.26□□□□□ -1.57
USP54-211ENST00000474929 S100ZQ8WXG8 99 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 GPR146Q96CH1 333 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 FAM210AQ96ND0 272 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 Q9HAA7 133 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 IFT46Q9NQC8 304 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 CCL28Q9NRJ3 127 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 PPP1R14DQ9NXH3 145 aa5.26□□□□□ -1.57
USP54-211ENST00000474929 IGHV3-38A0A0C4DH36 116 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 INS-IGF2F8WCM5 200 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 GABARAPO95166 117 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 APOA1P02647 267 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 PRM2P04554 102 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 F2RP25116 425 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 HLA-DMAP28067 261 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 CBX5P45973 191 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 SUPT4H1P63272 117 aaKnown RBP5.25□□□□□ -1.57
USP54-211ENST00000474929 SPCS2Q15005 226 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 TIGITQ495A1 244 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 LYSMD2Q8IV50 215 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 Q8N976 141 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 OR5AP2Q8NGF4 316 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 OR4A16Q8NH70 328 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 TXNDC17Q9BRA2 123 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 WDR12Q9GZL7 423 aaKnown RBP5.25□□□□□ -1.57
USP54-211ENST00000474929 SLC5A7Q9GZV3 580 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 RPH3ALQ9UNE2 315 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 NSG2Q9Y328 171 aa5.25□□□□□ -1.57
USP54-211ENST00000474929 CTDSP2O14595 271 aa5.24□□□□□ -1.57
USP54-211ENST00000474929 RGS5O15539 181 aa5.24□□□□□ -1.57
USP54-211ENST00000474929 KRASP01116 189 aa5.24□□□□□ -1.57
USP54-211ENST00000474929 IGLC1P0CG04 106 aa5.24□□□□□ -1.57
USP54-211ENST00000474929 SLC25A4P12235 298 aa5.24□□□□□ -1.57
USP54-211ENST00000474929 SH2D6Q7Z4S9 175 aa5.24□□□□□ -1.57
USP54-211ENST00000474929 OR5H2Q8NGV7 314 aa5.24□□□□□ -1.57
USP54-211ENST00000474929 AP3S1Q92572 193 aa5.24□□□□□ -1.57
USP54-211ENST00000474929 EHFQ9NZC4 300 aa5.24□□□□□ -1.57
USP54-211ENST00000474929 EXTL2Q9UBQ6 330 aa5.24□□□□□ -1.57
USP54-211ENST00000474929 LPAP08519 4548 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 TRAV12-2A0A075B6T6 113 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 H3BMQ9 156 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 PPYP01298 95 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 ORM1P02763 201 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 GYPEP15421 78 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 OR10J1P30954 320 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 G6PCP35575 357 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 HERV-K104P61576 105 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 HSPE1P61604 102 aaKnown RBP5.23□□□□□ -1.57
USP54-211ENST00000474929 TSPAN5P62079 268 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 OR2F1Q13607 317 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 LINC01620Q4KN68 170 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 TOR2AQ5JU69 321 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 REG3GQ6UW15 175 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 DHRS11Q6UWP2 260 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 Q6ZNX1 250 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 TMEM17Q86X19 198 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 SLC35G3Q8N808 338 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 ZNF680Q8NEM1 530 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 ATP6V0E2Q8NHE4 81 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 GPX8Q8TED1 209 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 ZNF2Q9BSG1 426 aaPredicted RBP5.23□□□□□ -1.57
USP54-211ENST00000474929 PDCD10Q9BUL8 212 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 MIXL1Q9H2W2 232 aa5.23□□□□□ -1.57
USP54-211ENST00000474929 TRAV8-3A0A0A6YYJ7 113 aa5.22□□□□□ -1.57
USP54-211ENST00000474929 PFDN1O60925 122 aa5.22□□□□□ -1.57
USP54-211ENST00000474929 TOMM40O96008 361 aa5.22□□□□□ -1.57
USP54-211ENST00000474929 NAT1P18440 290 aa5.22□□□□□ -1.57
USP54-211ENST00000474929 HRH1P35367 487 aa5.22□□□□□ -1.57
USP54-211ENST00000474929 GALR1P47211 349 aa5.22□□□□□ -1.57
USP54-211ENST00000474929 TAS2R46P59540 309 aa5.22□□□□□ -1.57
USP54-211ENST00000474929 ZNF846Q147U1 533 aa5.22□□□□□ -1.57
USP54-211ENST00000474929 WDR73Q6P4I2 378 aa5.22□□□□□ -1.57
USP54-211ENST00000474929 OR52I2Q8NH67 350 aa5.22□□□□□ -1.57
USP54-211ENST00000474929 RRNAD1Q96FB5 475 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms