RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TRAV5A0A0B4J249 113 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 A0A1W2PS18 150 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 K7EQG2 157 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 SOCS3O14543 225 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 C1QBP02746 253 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 OR5G3P0C626 314 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 NHLRC4P0CG21 123 aaPredicted RBP5.19□□□□□ -1.58
LIMD1-204ENST00000474665 RAB31Q13636 194 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 ZNF345Q14585 488 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 ZNF124Q15973 351 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 LGALSLQ3ZCW2 172 aaPredicted RBP5.19□□□□□ -1.58
LIMD1-204ENST00000474665 C1orf194Q5T5A4 169 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 LAMTOR1Q6IAA8 161 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 RBPMS2Q6ZRY4 209 aaKnown RBP5.19□□□□□ -1.58
LIMD1-204ENST00000474665 AKAP14Q86UN6 197 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 FAM167A-AS1Q96KT0 104 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 SPAG8Q99932 426 aaPredicted RBP5.19□□□□□ -1.58
LIMD1-204ENST00000474665 SH3BGRL3Q9H299 93 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 ARV1Q9H2C2 271 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 SEPSECSQ9HD40 501 aaKnown RBP5.19□□□□□ -1.58
LIMD1-204ENST00000474665 DNAJC4Q9NNZ3 241 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 HIGD1AQ9Y241 93 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 UBR4Q5T4S7 5183 aa5.19□□□□□ -1.58
LIMD1-204ENST00000474665 EIF3GO75821 320 aaKnown RBP eCLIP5.18□□□□□ -1.58
LIMD1-204ENST00000474665 IFNA5P01569 189 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 ATP6V0CP27449 155 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 TFPI2P48307 235 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 CD81P60033 236 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 PXDC1Q5TGL8 231 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 C10orf113Q5VZT2 155 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 SIGLEC15Q6ZMC9 328 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 LINC00305Q7Z4B0 112 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 WFDC3Q8IUB2 231 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 OR8I2Q8N0Y5 310 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 DEFB125Q8N687 156 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 HSD17B11Q8NBQ5 300 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 STXBP6Q8NFX7 210 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 ZNF503Q96F45 646 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 SLC25A22Q9H936 323 aa5.18□□□□□ -1.58
LIMD1-204ENST00000474665 ELOA3CA0A087WX78 387 aaPredicted RBP5.17□□□□□ -1.58
LIMD1-204ENST00000474665 TRAV2A0A0B4J234 112 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 TRAV8-2A0A0B4J237 113 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 HELTA6NFD8 242 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 H3BQ15 152 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 COX7A2P2O60397 106 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 CD5P06127 495 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 SNRPCP09234 159 aaKnown RBP5.17□□□□□ -1.58
LIMD1-204ENST00000474665 IGLC2P0DOY2 106 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 IGHV4-30-4P0DP06 118 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 NUP62P37198 522 aaPredicted RBP5.17□□□□□ -1.58
LIMD1-204ENST00000474665 DEFB1P60022 68 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 RAB2AP61019 212 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 RPL11P62913 178 aaKnown RBP5.17□□□□□ -1.58
LIMD1-204ENST00000474665 FFAR4Q5NUL3 377 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 LINC00322Q6ZN03 302 aaPredicted RBP5.17□□□□□ -1.58
LIMD1-204ENST00000474665 Q6ZRG5 221 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 TMUB2Q71RG4 321 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 MIR17HGQ75NE6 70 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 C9orf62Q8N4C0 152 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 RPP25LQ8N5L8 163 aaKnown RBP5.17□□□□□ -1.58
LIMD1-204ENST00000474665 OR2G3Q8NGZ4 309 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 SCGB1C1Q8TD33 95 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 GATAD1Q8WUU5 269 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 PPP1R14BQ96C90 147 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 GRAMD2BQ96HH9 432 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 C20orf173Q96LM9 149 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 ASCL2Q99929 193 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 PSMG3Q9BT73 122 aaPredicted RBP5.17□□□□□ -1.58
LIMD1-204ENST00000474665 SLC25A2Q9BXI2 301 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 TMEM231Q9H6L2 316 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 MAP6D1Q9H9H5 199 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 NRN1Q9NPD7 142 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 UBQLN2Q9UHD9 624 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 TIMM9Q9Y5J7 89 aa5.17□□□□□ -1.58
LIMD1-204ENST00000474665 A0A087X0K7 114 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 A0A0D9SG52 128 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 OR4C46A6NHA9 309 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 A8MZ25 164 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 OR11H12B2RN74 326 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 H3BTX0 84 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 SLC17A3O00476 420 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 TAAR5O14804 337 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 BCL2L11O43521 198 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 NDUFB4O95168 129 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 ZNF688P0C7X2 276 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 PRB4P10163 310 aaPredicted RBP5.16□□□□□ -1.58
LIMD1-204ENST00000474665 RPL7P18124 248 aaKnown RBP5.16□□□□□ -1.58
LIMD1-204ENST00000474665 HLA-DMBP28068 263 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 BMI1P35226 326 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 NKX2-5P52952 324 aaPredicted RBP5.16□□□□□ -1.58
LIMD1-204ENST00000474665 ZNF266Q14584 549 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 FAM78BQ5VT40 261 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 IGFL4Q6B9Z1 124 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 SSX7Q7RTT5 188 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 APRG1Q8IVJ8 170 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 ZNF709Q8N972 641 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 OR1L4Q8NGR5 311 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 SAT2Q96F10 170 aaPredicted RBP5.16□□□□□ -1.58
LIMD1-204ENST00000474665 NARS2Q96I59 477 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 563.3 ms