RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 CACFD1Q9UGQ2 172 aa9.96□□□□□ -0.82
CCDC78-209ENST00000474647 PSG1P11464 419 aa9.95□□□□□ -0.82
CCDC78-209ENST00000474647 RRAS2P62070 204 aaPredicted RBP9.95□□□□□ -0.82
CCDC78-209ENST00000474647 IAH1Q2TAA2 248 aaPredicted RBP9.95□□□□□ -0.82
CCDC78-209ENST00000474647 GSG1LQ6UXU4 331 aa9.95□□□□□ -0.82
CCDC78-209ENST00000474647 ZBTB8BQ8NAP8 495 aaPredicted RBP9.95□□□□□ -0.82
CCDC78-209ENST00000474647 OR4D5Q8NGN0 318 aa9.95□□□□□ -0.82
CCDC78-209ENST00000474647 OR1S1Q8NH92 325 aa9.95□□□□□ -0.82
CCDC78-209ENST00000474647 RNF125Q96EQ8 232 aa9.95□□□□□ -0.82
CCDC78-209ENST00000474647 SLC35B3Q9H1N7 401 aa9.95□□□□□ -0.82
CCDC78-209ENST00000474647 MED28Q9H204 178 aa9.95□□□□□ -0.82
CCDC78-209ENST00000474647 SAV1Q9H4B6 383 aaPredicted RBP9.95□□□□□ -0.82
CCDC78-209ENST00000474647 MGAT4CQ9UBM8 478 aa9.95□□□□□ -0.82
CCDC78-209ENST00000474647 HSPB7Q9UBY9 170 aa9.95□□□□□ -0.82
CCDC78-209ENST00000474647 LOC102723971A0A1B0GUV8 181 aa9.94□□□□□ -0.82
CCDC78-209ENST00000474647 C5orf51A6NDU8 294 aa9.94□□□□□ -0.82
CCDC78-209ENST00000474647 FAM25EA8MYX2 175 aa9.94□□□□□ -0.82
CCDC78-209ENST00000474647 ID1P41134 155 aa9.94□□□□□ -0.82
CCDC78-209ENST00000474647 CD300CQ08708 224 aa9.94□□□□□ -0.82
CCDC78-209ENST00000474647 RNF212Q495C1 297 aa9.94□□□□□ -0.82
CCDC78-209ENST00000474647 TMEM88Q6PEY1 159 aa9.94□□□□□ -0.82
CCDC78-209ENST00000474647 FOXI2Q6ZQN5 318 aa9.94□□□□□ -0.82
CCDC78-209ENST00000474647 ZNF709Q8N972 641 aa9.94□□□□□ -0.82
CCDC78-209ENST00000474647 TMEM170AQ8WVE7 144 aa9.94□□□□□ -0.82
CCDC78-209ENST00000474647 C2orf50Q96LR7 162 aa9.94□□□□□ -0.82
CCDC78-209ENST00000474647 GOLT1BQ9Y3E0 138 aa9.94□□□□□ -0.82
CCDC78-209ENST00000474647 YTHDF2Q9Y5A9 579 aaKnown RBP9.94□□□□□ -0.82
CCDC78-209ENST00000474647 C16orf90A8MZG2 172 aa9.93□□□□□ -0.82
CCDC78-209ENST00000474647 SIX6O95475 246 aa9.93□□□□□ -0.82
CCDC78-209ENST00000474647 HBE1P02100 147 aa9.93□□□□□ -0.82
CCDC78-209ENST00000474647 NUP62P37198 522 aaPredicted RBP9.93□□□□□ -0.82
CCDC78-209ENST00000474647 PSMB3P49720 205 aa9.93□□□□□ -0.82
CCDC78-209ENST00000474647 H2BFSP57053 126 aa9.93□□□□□ -0.82
CCDC78-209ENST00000474647 DAD1P61803 113 aa9.93□□□□□ -0.82
CCDC78-209ENST00000474647 FCN2Q15485 313 aa9.93□□□□□ -0.82
CCDC78-209ENST00000474647 OR11H7Q8NGC8 314 aa9.93□□□□□ -0.82
CCDC78-209ENST00000474647 CHAC2Q8WUX2 184 aa9.93□□□□□ -0.82
CCDC78-209ENST00000474647 F6UB75 175 aa9.92□□□□□ -0.82
CCDC78-209ENST00000474647 CXCL3P19876 107 aa9.92□□□□□ -0.82
CCDC78-209ENST00000474647 IL15RAQ13261 267 aa9.92□□□□□ -0.82
CCDC78-209ENST00000474647 NOXA1Q86UR1 476 aa9.92□□□□□ -0.82
CCDC78-209ENST00000474647 ATG101Q9BSB4 218 aa9.92□□□□□ -0.82
CCDC78-209ENST00000474647 NMES1Q9C002 83 aa9.92□□□□□ -0.82
CCDC78-209ENST00000474647 RBKSQ9H477 322 aa9.92□□□□□ -0.82
CCDC78-209ENST00000474647 GSKIPQ9P0R6 139 aa9.92□□□□□ -0.82
CCDC78-209ENST00000474647 PFDN2Q9UHV9 154 aa9.92□□□□□ -0.82
CCDC78-209ENST00000474647 ZFP92A6NM28 416 aa9.91□□□□□ -0.82
CCDC78-209ENST00000474647 MED6O75586 246 aa9.91□□□□□ -0.82
CCDC78-209ENST00000474647 LYZP61626 148 aa9.91□□□□□ -0.82
CCDC78-209ENST00000474647 CYCSP99999 105 aaKnown RBP9.91□□□□□ -0.82
CCDC78-209ENST00000474647 PSG9Q00887 426 aa9.91□□□□□ -0.82
CCDC78-209ENST00000474647 ID3Q02535 119 aa9.91□□□□□ -0.82
CCDC78-209ENST00000474647 RRN3P1Q2M238 152 aa9.91□□□□□ -0.82
CCDC78-209ENST00000474647 FAM78BQ5VT40 261 aa9.91□□□□□ -0.82
CCDC78-209ENST00000474647 EBLN2Q6P2I7 272 aa9.91□□□□□ -0.82
CCDC78-209ENST00000474647 MAPKAPK5-AS1Q8N8E1 139 aa9.91□□□□□ -0.82
CCDC78-209ENST00000474647 DTD1Q8TEA8 209 aa9.91□□□□□ -0.82
CCDC78-209ENST00000474647 TMEM208Q9BTX3 173 aa9.91□□□□□ -0.82
CCDC78-209ENST00000474647 MAGT1Q9H0U3 335 aa9.91□□□□□ -0.82
CCDC78-209ENST00000474647 SYNGR2O43760 224 aa9.9□□□□□ -0.82
CCDC78-209ENST00000474647 SCGB1D2O95969 90 aa9.9□□□□□ -0.82
CCDC78-209ENST00000474647 MBPP02686 304 aaPredicted RBP9.9□□□□□ -0.82
CCDC78-209ENST00000474647 ZNF90Q03938 601 aa9.9□□□□□ -0.82
CCDC78-209ENST00000474647 TNP2Q05952 138 aa9.9□□□□□ -0.82
CCDC78-209ENST00000474647 OR8G2PQ6IF36 304 aa9.9□□□□□ -0.82
CCDC78-209ENST00000474647 C1orf158Q8N1D5 194 aa9.9□□□□□ -0.82
CCDC78-209ENST00000474647 ASB13Q8WXK3 278 aa9.9□□□□□ -0.82
CCDC78-209ENST00000474647 RCL1Q9Y2P8 373 aaKnown RBP9.9□□□□□ -0.82
CCDC78-209ENST00000474647 K7EPK0 472 aa9.89□□□□□ -0.83
CCDC78-209ENST00000474647 SOCS3O14543 225 aa9.89□□□□□ -0.83
CCDC78-209ENST00000474647 GIPP09681 153 aaPredicted RBP9.89□□□□□ -0.83
CCDC78-209ENST00000474647 POLR2GP62487 172 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCDC78-209ENST00000474647 RAB32Q13637 225 aa9.89□□□□□ -0.83
CCDC78-209ENST00000474647 C15orf53Q8NAA6 179 aa9.89□□□□□ -0.83
CCDC78-209ENST00000474647 SLC35E1Q96K37 410 aa9.89□□□□□ -0.83
CCDC78-209ENST00000474647 CLUHP3Q96NS8 147 aa9.89□□□□□ -0.83
CCDC78-209ENST00000474647 CIB3Q96Q77 187 aaPredicted RBP9.89□□□□□ -0.83
CCDC78-209ENST00000474647 RPRMQ9NS64 109 aa9.89□□□□□ -0.83
CCDC78-209ENST00000474647 WRBO00258 174 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 ISLRO14498 428 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 SSSCA1O60232 199 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 IAPPP10997 89 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 PAX9P55771 341 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 S100A10P60903 97 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 OR2F1Q13607 317 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 SPATA31B1PQ5VZV4 182 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 AKAP14Q86UN6 197 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 OR8I2Q8N0Y5 310 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 PPP1R1CQ8WVI7 109 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 C16orf92Q96LL3 132 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 LSM5Q9Y4Y9 91 aaKnown RBP9.88□□□□□ -0.83
CCDC78-209ENST00000474647 U3KQ87 197 aa9.88□□□□□ -0.83
CCDC78-209ENST00000474647 LRP1BQ9NZR2 4599 aa9.87□□□□□ -0.83
CCDC78-209ENST00000474647 IGKV1D-37A0A075B6S9 117 aa9.87□□□□□ -0.83
CCDC78-209ENST00000474647 A0A0J9YX75 114 aa9.87□□□□□ -0.83
CCDC78-209ENST00000474647 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
CCDC78-209ENST00000474647 FABP1P07148 127 aa9.87□□□□□ -0.83
CCDC78-209ENST00000474647 FAM3BP58499 235 aaPredicted RBP9.87□□□□□ -0.83
CCDC78-209ENST00000474647 RAP2BP61225 183 aa9.87□□□□□ -0.83
CCDC78-209ENST00000474647 GAMTQ14353 236 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms