RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 MARVELD1Q9BSK0 173 aa11.67□□□□□ -0.54
ITGB1-210ENST00000474568 SHANK2-AS3Q9BTD1 123 aa11.67□□□□□ -0.54
ITGB1-210ENST00000474568 LYRM2Q9NU23 88 aaPredicted RBP11.67□□□□□ -0.54
ITGB1-210ENST00000474568 AGRNO00468 2067 aa11.67□□□□□ -0.54
ITGB1-210ENST00000474568 UBE2L5PA0A1B0GUS4 154 aa11.66□□□□□ -0.54
ITGB1-210ENST00000474568 SSNA1O43805 119 aa11.66□□□□□ -0.54
ITGB1-210ENST00000474568 HLA-DRB4P13762 266 aa11.66□□□□□ -0.54
ITGB1-210ENST00000474568 S100A7P31151 101 aa11.66□□□□□ -0.54
ITGB1-210ENST00000474568 SULT1A1P50225 295 aa11.66□□□□□ -0.54
ITGB1-210ENST00000474568 PLP1P60201 277 aa11.66□□□□□ -0.54
ITGB1-210ENST00000474568 ZNF546Q86UE3 836 aa11.66□□□□□ -0.54
ITGB1-210ENST00000474568 ARV1Q9H2C2 271 aa11.66□□□□□ -0.54
ITGB1-210ENST00000474568 UQCC1Q9NVA1 299 aa11.66□□□□□ -0.54
ITGB1-210ENST00000474568 XCL2Q9UBD3 114 aa11.66□□□□□ -0.54
ITGB1-210ENST00000474568 HLA-DRB4X5D2U9 266 aa11.66□□□□□ -0.54
ITGB1-210ENST00000474568 ISLRO14498 428 aa11.65□□□□□ -0.54
ITGB1-210ENST00000474568 SNRPCP09234 159 aaKnown RBP11.65□□□□□ -0.54
ITGB1-210ENST00000474568 ATF4P18848 351 aaPredicted RBP11.65□□□□□ -0.54
ITGB1-210ENST00000474568 CAMLGP49069 296 aa11.65□□□□□ -0.54
ITGB1-210ENST00000474568 MEOX2P50222 304 aa11.65□□□□□ -0.54
ITGB1-210ENST00000474568 BAXQ07812 192 aa11.65□□□□□ -0.54
ITGB1-210ENST00000474568 STX12Q86Y82 276 aa11.65□□□□□ -0.54
ITGB1-210ENST00000474568 OR4B1Q8NGF8 309 aa11.65□□□□□ -0.54
ITGB1-210ENST00000474568 GPR82Q96P67 336 aa11.65□□□□□ -0.54
ITGB1-210ENST00000474568 SAV1Q9H4B6 383 aaPredicted RBP11.65□□□□□ -0.54
ITGB1-210ENST00000474568 OR5AC2Q9NZP5 309 aa11.65□□□□□ -0.54
ITGB1-210ENST00000474568 PLECQ15149 4684 aaKnown RBP11.64□□□□□ -0.55
ITGB1-210ENST00000474568 COX7A2P2O60397 106 aa11.64□□□□□ -0.55
ITGB1-210ENST00000474568 PRB4P10163 310 aaPredicted RBP11.64□□□□□ -0.55
ITGB1-210ENST00000474568 MIC13Q5XKP0 118 aa11.64□□□□□ -0.55
ITGB1-210ENST00000474568 FOXI2Q6ZQN5 318 aa11.64□□□□□ -0.55
ITGB1-210ENST00000474568 RNF182Q8N6D2 247 aa11.64□□□□□ -0.55
ITGB1-210ENST00000474568 WDR83OSQ9Y284 106 aa11.64□□□□□ -0.55
ITGB1-210ENST00000474568 IGHV4-28A0A0C4DH34 117 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 H0YIZ8 118 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 RLN2P04090 185 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 RPL7P18124 248 aaKnown RBP11.63□□□□□ -0.55
ITGB1-210ENST00000474568 S100A11P31949 105 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 H2BFSP57053 126 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 NANOS2P60321 138 aaKnown RBP11.63□□□□□ -0.55
ITGB1-210ENST00000474568 NUTF2P61970 127 aaKnown RBP11.63□□□□□ -0.55
ITGB1-210ENST00000474568 HBG1P69891 147 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 HBG2P69892 147 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 NHLH2Q02577 135 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 RAB31Q13636 194 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 TMEM41BQ5BJD5 291 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 EBLN2Q6P2I7 272 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 LINC00305Q7Z4B0 112 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 NMES1Q9C002 83 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 RPRMQ9NS64 109 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 TENM2Q9NT68 2774 aa11.63□□□□□ -0.55
ITGB1-210ENST00000474568 TRAV8-2A0A0B4J237 113 aa11.62□□□□□ -0.55
ITGB1-210ENST00000474568 LCE6AA0A183 80 aa11.62□□□□□ -0.55
ITGB1-210ENST00000474568 FGF7P21781 194 aa11.62□□□□□ -0.55
ITGB1-210ENST00000474568 HLA-DMBP28068 263 aa11.62□□□□□ -0.55
ITGB1-210ENST00000474568 FAM78BQ5VT40 261 aa11.62□□□□□ -0.55
ITGB1-210ENST00000474568 SAMD13Q5VXD3 122 aa11.62□□□□□ -0.55
ITGB1-210ENST00000474568 MORN5Q5VZ52 161 aa11.62□□□□□ -0.55
ITGB1-210ENST00000474568 CSNK1G2-AS1Q8NCQ2 148 aa11.62□□□□□ -0.55
ITGB1-210ENST00000474568 LRRC20Q8TCA0 184 aa11.62□□□□□ -0.55
ITGB1-210ENST00000474568 SLC35B3Q9H1N7 401 aa11.62□□□□□ -0.55
ITGB1-210ENST00000474568 LYSTQ99698 3801 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 A0A0J9YX75 114 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 E5RGE8 158 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 H3BTX0 84 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 ZNF705DP0CH99 300 aaPredicted RBP11.61□□□□□ -0.55
ITGB1-210ENST00000474568 ZNF705BP0CI00 300 aaPredicted RBP11.61□□□□□ -0.55
ITGB1-210ENST00000474568 RBMY1A1P0DJD3 496 aaKnown RBP11.61□□□□□ -0.55
ITGB1-210ENST00000474568 RBMY1CP0DJD4 496 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 RBMY1FQ15415 496 aaKnown RBP11.61□□□□□ -0.55
ITGB1-210ENST00000474568 VWC2Q2TAL6 325 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 PXDC1Q5TGL8 231 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 C10orf113Q5VZT2 155 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 S100A7AQ86SG5 101 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 Q8NAQ8 132 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 ZNF738Q8NE65 137 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 C11orf45Q8TAV5 145 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 PPP1R1CQ8WVI7 109 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 TMEM37Q8WXS4 190 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 C11orf68Q9H3H3 251 aaKnown RBP11.61□□□□□ -0.55
ITGB1-210ENST00000474568 X6R8D5 127 aa11.61□□□□□ -0.55
ITGB1-210ENST00000474568 ALMS1Q8TCU4 4167 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 IGHV3OR16-12A0A075B7B8 117 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 TRAV5A0A0B4J249 113 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 B2MP61769 119 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 CYCSP99999 105 aaKnown RBP11.6□□□□□ -0.55
ITGB1-210ENST00000474568 CLINT1Q14677 625 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 OPCMLQ14982 345 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 ATP6V1FQ16864 119 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 Q6ZRG5 221 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 OR5C1Q8NGR4 320 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 THAP6Q8TBB0 222 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 C1QTNF4Q9BXJ3 329 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 SLC25A31Q9H0C2 315 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 ALG5Q9Y673 324 aa11.6□□□□□ -0.55
ITGB1-210ENST00000474568 ZNF705EA8MWA4 302 aaPredicted RBP11.59□□□□□ -0.55
ITGB1-210ENST00000474568 MRPS12O15235 138 aaKnown RBP11.59□□□□□ -0.55
ITGB1-210ENST00000474568 PRR20EP86478 221 aa11.59□□□□□ -0.55
ITGB1-210ENST00000474568 PRR20CP86479 221 aa11.59□□□□□ -0.55
ITGB1-210ENST00000474568 PRR20DP86480 221 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms