RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 LINC00854A0A1B0GVQ3 168 aa14.58□□□□□ -0.08
PDLIM4-206ENST00000474421 FNDC10F2Z333 226 aa14.58□□□□□ -0.08
PDLIM4-206ENST00000474421 HYPMO75409 117 aa14.58□□□□□ -0.08
PDLIM4-206ENST00000474421 HBE1P02100 147 aa14.58□□□□□ -0.08
PDLIM4-206ENST00000474421 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.58□□□□□ -0.08
PDLIM4-206ENST00000474421 SLC25A39Q9BZJ4 359 aaPredicted RBP14.58□□□□□ -0.08
PDLIM4-206ENST00000474421 RNF24Q9Y225 148 aa14.58□□□□□ -0.08
PDLIM4-206ENST00000474421 HIGD1AQ9Y241 93 aa14.58□□□□□ -0.08
PDLIM4-206ENST00000474421 A8MTW9 85 aa14.57□□□□□ -0.08
PDLIM4-206ENST00000474421 DUSP14O95147 198 aaKnown RBP14.57□□□□□ -0.08
PDLIM4-206ENST00000474421 P0DMU3 169 aa14.57□□□□□ -0.08
PDLIM4-206ENST00000474421 FAM231AP0DMU4 169 aa14.57□□□□□ -0.08
PDLIM4-206ENST00000474421 FAM231CP0DMU5 169 aa14.57□□□□□ -0.08
PDLIM4-206ENST00000474421 RPL7P18124 248 aaKnown RBP14.57□□□□□ -0.08
PDLIM4-206ENST00000474421 DLK1P80370 383 aa14.57□□□□□ -0.08
PDLIM4-206ENST00000474421 FAM210BQ96KR6 192 aa14.57□□□□□ -0.08
PDLIM4-206ENST00000474421 SHANK2-AS3Q9BTD1 123 aa14.57□□□□□ -0.08
PDLIM4-206ENST00000474421 DKK2Q9UBU2 259 aa14.57□□□□□ -0.08
PDLIM4-206ENST00000474421 PMS2P5A8MQ11 134 aa14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 H3BRN7 92 aa14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 LINC00869P0C866 280 aa14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 ANXA7P20073 488 aaKnown RBP14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 TAS2R30P59541 319 aa14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 PLP1P60201 277 aa14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 IAH1Q2TAA2 248 aaPredicted RBP14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 TMEM14EPQ6UXP3 125 aa14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 OR10P1Q8NGE3 313 aa14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 C17orf77Q96MU5 243 aa14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 NIPSNAP3BQ9BS92 247 aa14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 SCRT1Q9BWW7 348 aa14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 NPVFQ9HCQ7 196 aa14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 MGAT4CQ9UBM8 478 aa14.56□□□□□ -0.08
PDLIM4-206ENST00000474421 TSC22D2O75157 780 aa14.55□□□□□ -0.08
PDLIM4-206ENST00000474421 BTCP35070 178 aa14.55□□□□□ -0.08
PDLIM4-206ENST00000474421 RRN3P1Q2M238 152 aa14.55□□□□□ -0.08
PDLIM4-206ENST00000474421 FAM222AQ5U5X8 452 aa14.55□□□□□ -0.08
PDLIM4-206ENST00000474421 GSG1LQ6UXU4 331 aa14.55□□□□□ -0.08
PDLIM4-206ENST00000474421 C1orf158Q8N1D5 194 aa14.55□□□□□ -0.08
PDLIM4-206ENST00000474421 IGF2BP2-AS1Q96M15 143 aa14.55□□□□□ -0.08
PDLIM4-206ENST00000474421 SDHCQ99643 169 aaPredicted RBP14.55□□□□□ -0.08
PDLIM4-206ENST00000474421 TMEM208Q9BTX3 173 aa14.55□□□□□ -0.08
PDLIM4-206ENST00000474421 LOC102723971A0A1B0GUV8 181 aa14.54□□□□□ -0.08
PDLIM4-206ENST00000474421 SCGB1D2O95969 90 aa14.54□□□□□ -0.08
PDLIM4-206ENST00000474421 OR5G3P0C626 314 aa14.54□□□□□ -0.08
PDLIM4-206ENST00000474421 METTL15P1P0C7V9 234 aa14.54□□□□□ -0.08
PDLIM4-206ENST00000474421 IL7P13232 177 aa14.54□□□□□ -0.08
PDLIM4-206ENST00000474421 RRAS2P62070 204 aaPredicted RBP14.54□□□□□ -0.08
PDLIM4-206ENST00000474421 FGL1Q08830 312 aa14.54□□□□□ -0.08
PDLIM4-206ENST00000474421 OXA1LQ15070 435 aa14.54□□□□□ -0.08
PDLIM4-206ENST00000474421 TEPPQ6URK8 271 aa14.54□□□□□ -0.08
PDLIM4-206ENST00000474421 AMTNQ6UX39 209 aa14.54□□□□□ -0.08
PDLIM4-206ENST00000474421 POM121L12Q8N7R1 296 aa14.54□□□□□ -0.08
PDLIM4-206ENST00000474421 MITD1Q8WV92 249 aa14.54□□□□□ -0.08
PDLIM4-206ENST00000474421 K7EPK0 472 aa14.53□□□□□ -0.08
PDLIM4-206ENST00000474421 CNN1P51911 297 aaKnown RBP14.53□□□□□ -0.08
PDLIM4-206ENST00000474421 PXDC1Q5TGL8 231 aa14.53□□□□□ -0.08
PDLIM4-206ENST00000474421 ZBTB8BQ8NAP8 495 aaPredicted RBP14.53□□□□□ -0.08
PDLIM4-206ENST00000474421 GGACTQ9BVM4 153 aa14.53□□□□□ -0.08
PDLIM4-206ENST00000474421 GSKIPQ9P0R6 139 aa14.53□□□□□ -0.08
PDLIM4-206ENST00000474421 HECTD4Q9Y4D8 3996 aa14.52□□□□□ -0.08
PDLIM4-206ENST00000474421 TRAV8-2A0A0B4J237 113 aa14.52□□□□□ -0.09
PDLIM4-206ENST00000474421 INSP01308 110 aa14.52□□□□□ -0.09
PDLIM4-206ENST00000474421 B2MP61769 119 aa14.52□□□□□ -0.09
PDLIM4-206ENST00000474421 ZNF738Q8NE65 137 aa14.52□□□□□ -0.09
PDLIM4-206ENST00000474421 OR11H7Q8NGC8 314 aa14.52□□□□□ -0.09
PDLIM4-206ENST00000474421 ARL6Q9H0F7 186 aa14.52□□□□□ -0.09
PDLIM4-206ENST00000474421 YTHDF2Q9Y5A9 579 aaKnown RBP14.52□□□□□ -0.09
PDLIM4-206ENST00000474421 A0A087X0K7 114 aa14.51□□□□□ -0.09
PDLIM4-206ENST00000474421 CCNKO75909 580 aa14.51□□□□□ -0.09
PDLIM4-206ENST00000474421 LINC00336Q6ZUF6 198 aa14.51□□□□□ -0.09
PDLIM4-206ENST00000474421 ZNF546Q86UE3 836 aa14.51□□□□□ -0.09
PDLIM4-206ENST00000474421 RNF182Q8N6D2 247 aa14.51□□□□□ -0.09
PDLIM4-206ENST00000474421 LRRC20Q8TCA0 184 aa14.51□□□□□ -0.09
PDLIM4-206ENST00000474421 RCL1Q9Y2P8 373 aaKnown RBP14.51□□□□□ -0.09
PDLIM4-206ENST00000474421 GOSR2O14653 212 aa14.5□□□□□ -0.09
PDLIM4-206ENST00000474421 ZNF846Q147U1 533 aa14.5□□□□□ -0.09
PDLIM4-206ENST00000474421 SPINK13Q1W4C9 94 aa14.5□□□□□ -0.09
PDLIM4-206ENST00000474421 IGFL4Q6B9Z1 124 aa14.5□□□□□ -0.09
PDLIM4-206ENST00000474421 UHRF2Q96PU4 802 aa14.5□□□□□ -0.09
PDLIM4-206ENST00000474421 C20orf85Q9H1P6 137 aa14.5□□□□□ -0.09
PDLIM4-206ENST00000474421 NDUFA13Q9P0J0 144 aa14.5□□□□□ -0.09
PDLIM4-206ENST00000474421 DAD1P61803 113 aa14.49□□□□□ -0.09
PDLIM4-206ENST00000474421 SLC38A11Q08AI6 406 aa14.49□□□□□ -0.09
PDLIM4-206ENST00000474421 ARV1Q9H2C2 271 aa14.49□□□□□ -0.09
PDLIM4-206ENST00000474421 C7orf66A4D0T2 115 aa14.48□□□□□ -0.09
PDLIM4-206ENST00000474421 L7N2F9 121 aa14.48□□□□□ -0.09
PDLIM4-206ENST00000474421 M0R2Z0 102 aa14.48□□□□□ -0.09
PDLIM4-206ENST00000474421 LYRM1O43325 122 aa14.48□□□□□ -0.09
PDLIM4-206ENST00000474421 MBPP02686 304 aaPredicted RBP14.48□□□□□ -0.09
PDLIM4-206ENST00000474421 CXCL2P19875 107 aa14.48□□□□□ -0.09
PDLIM4-206ENST00000474421 CXCL3P19876 107 aa14.48□□□□□ -0.09
PDLIM4-206ENST00000474421 VAMP2P63027 116 aa14.48□□□□□ -0.09
PDLIM4-206ENST00000474421 PSG3Q16557 428 aa14.48□□□□□ -0.09
PDLIM4-206ENST00000474421 PPP1R14DQ9NXH3 145 aa14.48□□□□□ -0.09
PDLIM4-206ENST00000474421 BOLA2-SMG1P6H3BVE0 249 aa14.47□□□□□ -0.09
PDLIM4-206ENST00000474421 PLA2G10O15496 165 aa14.47□□□□□ -0.09
PDLIM4-206ENST00000474421 CRXO43186 299 aaPredicted RBP14.47□□□□□ -0.09
PDLIM4-206ENST00000474421 HTN3P15516 51 aa14.47□□□□□ -0.09
PDLIM4-206ENST00000474421 PATE2Q6UY27 113 aa14.47□□□□□ -0.09
PDLIM4-206ENST00000474421 UBE2DNLQ8IWF7 75 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms