RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 DEFA1P59665 94 aa13.06□□□□□ -0.32
EFNA1-204ENST00000474413 DEFA3P59666 94 aa13.06□□□□□ -0.32
EFNA1-204ENST00000474413 ZNF546Q86UE3 836 aa13.06□□□□□ -0.32
EFNA1-204ENST00000474413 Q8NAQ8 132 aa13.06□□□□□ -0.32
EFNA1-204ENST00000474413 OR11H2Q8NH07 326 aa13.06□□□□□ -0.32
EFNA1-204ENST00000474413 RSG1Q9BU20 258 aa13.06□□□□□ -0.32
EFNA1-204ENST00000474413 ARL6Q9H0F7 186 aa13.06□□□□□ -0.32
EFNA1-204ENST00000474413 SAV1Q9H4B6 383 aaPredicted RBP13.06□□□□□ -0.32
EFNA1-204ENST00000474413 CLEC5AQ9NY25 188 aa13.06□□□□□ -0.32
EFNA1-204ENST00000474413 ISLRO14498 428 aa13.05□□□□□ -0.32
EFNA1-204ENST00000474413 PRR20EP86478 221 aa13.05□□□□□ -0.32
EFNA1-204ENST00000474413 PRR20CP86479 221 aa13.05□□□□□ -0.32
EFNA1-204ENST00000474413 PRR20DP86480 221 aa13.05□□□□□ -0.32
EFNA1-204ENST00000474413 PRR20BP86481 221 aa13.05□□□□□ -0.32
EFNA1-204ENST00000474413 PRR20AP86496 221 aa13.05□□□□□ -0.32
EFNA1-204ENST00000474413 MORN3Q6PF18 240 aaPredicted RBP13.05□□□□□ -0.32
EFNA1-204ENST00000474413 ZNF709Q8N972 641 aa13.05□□□□□ -0.32
EFNA1-204ENST00000474413 TMEM37Q8WXS4 190 aa13.05□□□□□ -0.32
EFNA1-204ENST00000474413 RARRES2Q99969 163 aa13.05□□□□□ -0.32
EFNA1-204ENST00000474413 NMES1Q9C002 83 aa13.05□□□□□ -0.32
EFNA1-204ENST00000474413 ARV1Q9H2C2 271 aa13.05□□□□□ -0.32
EFNA1-204ENST00000474413 C11orf68Q9H3H3 251 aaKnown RBP13.05□□□□□ -0.32
EFNA1-204ENST00000474413 X6R8D5 127 aa13.05□□□□□ -0.32
EFNA1-204ENST00000474413 UBE2L5PA0A1B0GUS4 154 aa13.04□□□□□ -0.32
EFNA1-204ENST00000474413 OR5G3P0C626 314 aa13.04□□□□□ -0.32
EFNA1-204ENST00000474413 ATF4P18848 351 aaPredicted RBP13.04□□□□□ -0.32
EFNA1-204ENST00000474413 GALR1P47211 349 aa13.04□□□□□ -0.32
EFNA1-204ENST00000474413 IGFL4Q6B9Z1 124 aa13.04□□□□□ -0.32
EFNA1-204ENST00000474413 FOXI2Q6ZQN5 318 aa13.04□□□□□ -0.32
EFNA1-204ENST00000474413 LINC00052Q96N35 136 aa13.04□□□□□ -0.32
EFNA1-204ENST00000474413 UQCC1Q9NVA1 299 aa13.04□□□□□ -0.32
EFNA1-204ENST00000474413 A8MTW9 85 aa13.03□□□□□ -0.32
EFNA1-204ENST00000474413 ZNF705EA8MWA4 302 aaPredicted RBP13.03□□□□□ -0.32
EFNA1-204ENST00000474413 DEFB4AO15263 64 aa13.03□□□□□ -0.32
EFNA1-204ENST00000474413 PVALBP20472 110 aaPredicted RBP13.03□□□□□ -0.32
EFNA1-204ENST00000474413 RAP2BP61225 183 aa13.03□□□□□ -0.32
EFNA1-204ENST00000474413 LRRC37A5PQ49AS3 106 aa13.03□□□□□ -0.32
EFNA1-204ENST00000474413 MIC13Q5XKP0 118 aa13.03□□□□□ -0.32
EFNA1-204ENST00000474413 RNF182Q8N6D2 247 aa13.03□□□□□ -0.32
EFNA1-204ENST00000474413 GPR82Q96P67 336 aa13.03□□□□□ -0.32
EFNA1-204ENST00000474413 A0A087X0K7 114 aa13.02□□□□□ -0.33
EFNA1-204ENST00000474413 A0A0J9YX75 114 aa13.02□□□□□ -0.33
EFNA1-204ENST00000474413 LCE6AA0A183 80 aa13.02□□□□□ -0.33
EFNA1-204ENST00000474413 RBMY1A1P0DJD3 496 aaKnown RBP13.02□□□□□ -0.33
EFNA1-204ENST00000474413 RBMY1CP0DJD4 496 aa13.02□□□□□ -0.33
EFNA1-204ENST00000474413 HLA-DMBP28068 263 aa13.02□□□□□ -0.33
EFNA1-204ENST00000474413 CAMLGP49069 296 aa13.02□□□□□ -0.33
EFNA1-204ENST00000474413 MEOX2P50222 304 aa13.02□□□□□ -0.33
EFNA1-204ENST00000474413 NHLH2Q02577 135 aa13.02□□□□□ -0.33
EFNA1-204ENST00000474413 OPCMLQ14982 345 aa13.02□□□□□ -0.33
EFNA1-204ENST00000474413 RBMY1FQ15415 496 aaKnown RBP13.02□□□□□ -0.33
EFNA1-204ENST00000474413 RNF126Q9BV68 326 aa13.02□□□□□ -0.33
EFNA1-204ENST00000474413 IGHV4-28A0A0C4DH34 117 aa13.01□□□□□ -0.33
EFNA1-204ENST00000474413 IGKV3-20P01619 116 aa13.01□□□□□ -0.33
EFNA1-204ENST00000474413 PMS2P11Q13670 270 aa13.01□□□□□ -0.33
EFNA1-204ENST00000474413 AMTNQ6UX39 209 aa13.01□□□□□ -0.33
EFNA1-204ENST00000474413 STX12Q86Y82 276 aa13.01□□□□□ -0.33
EFNA1-204ENST00000474413 PPP1R1CQ8WVI7 109 aa13.01□□□□□ -0.33
EFNA1-204ENST00000474413 C16orf92Q96LL3 132 aa13.01□□□□□ -0.33
EFNA1-204ENST00000474413 CLUHP3Q96NS8 147 aa13.01□□□□□ -0.33
EFNA1-204ENST00000474413 SLC35B3Q9H1N7 401 aa13.01□□□□□ -0.33
EFNA1-204ENST00000474413 XCL2Q9UBD3 114 aa13.01□□□□□ -0.33
EFNA1-204ENST00000474413 ALG5Q9Y673 324 aa13.01□□□□□ -0.33
EFNA1-204ENST00000474413 VPS13DQ5THJ4 4388 aa13□□□□□ -0.33
EFNA1-204ENST00000474413 PTTG1O95997 202 aa13□□□□□ -0.33
EFNA1-204ENST00000474413 PRB4P10163 310 aaPredicted RBP13□□□□□ -0.33
EFNA1-204ENST00000474413 RPL7P18124 248 aaKnown RBP13□□□□□ -0.33
EFNA1-204ENST00000474413 S100A11P31949 105 aa13□□□□□ -0.33
EFNA1-204ENST00000474413 ID1P41134 155 aa13□□□□□ -0.33
EFNA1-204ENST00000474413 TMEM41BQ5BJD5 291 aa13□□□□□ -0.33
EFNA1-204ENST00000474413 PXDC1Q5TGL8 231 aa13□□□□□ -0.33
EFNA1-204ENST00000474413 FAM78BQ5VT40 261 aa13□□□□□ -0.33
EFNA1-204ENST00000474413 LINC00305Q7Z4B0 112 aa13□□□□□ -0.33
EFNA1-204ENST00000474413 CHAC2Q8WUX2 184 aa13□□□□□ -0.33
EFNA1-204ENST00000474413 E5RGE8 158 aa12.99□□□□□ -0.33
EFNA1-204ENST00000474413 SLC17A3O00476 420 aa12.99□□□□□ -0.33
EFNA1-204ENST00000474413 SSNA1O43805 119 aa12.99□□□□□ -0.33
EFNA1-204ENST00000474413 SNRPCP09234 159 aaKnown RBP12.99□□□□□ -0.33
EFNA1-204ENST00000474413 CXCL3P19876 107 aa12.99□□□□□ -0.33
EFNA1-204ENST00000474413 FXYD7P58549 80 aa12.99□□□□□ -0.33
EFNA1-204ENST00000474413 SAMD13Q5VXD3 122 aa12.99□□□□□ -0.33
EFNA1-204ENST00000474413 COX7A2P2O60397 106 aa12.98□□□□□ -0.33
EFNA1-204ENST00000474413 MPC2O95563 127 aa12.98□□□□□ -0.33
EFNA1-204ENST00000474413 IGLC2P0DOY2 106 aa12.98□□□□□ -0.33
EFNA1-204ENST00000474413 FGF7P21781 194 aa12.98□□□□□ -0.33
EFNA1-204ENST00000474413 RPL29P47914 159 aaKnown RBP12.98□□□□□ -0.33
EFNA1-204ENST00000474413 HBG1P69891 147 aa12.98□□□□□ -0.33
EFNA1-204ENST00000474413 HBG2P69892 147 aa12.98□□□□□ -0.33
EFNA1-204ENST00000474413 BAXQ07812 192 aa12.98□□□□□ -0.33
EFNA1-204ENST00000474413 GCSAMLQ5JQS6 135 aa12.98□□□□□ -0.33
EFNA1-204ENST00000474413 ZNF705AQ6ZN79 300 aaPredicted RBP12.98□□□□□ -0.33
EFNA1-204ENST00000474413 OR5C1Q8NGR4 320 aa12.98□□□□□ -0.33
EFNA1-204ENST00000474413 THAP6Q8TBB0 222 aa12.98□□□□□ -0.33
EFNA1-204ENST00000474413 NPCDR1Q9BY65 106 aa12.98□□□□□ -0.33
EFNA1-204ENST00000474413 SLC39A9Q9NUM3 307 aa12.98□□□□□ -0.33
EFNA1-204ENST00000474413 ELOA3CA0A087WX78 387 aaPredicted RBP12.97□□□□□ -0.33
EFNA1-204ENST00000474413 TRAV5A0A0B4J249 113 aa12.97□□□□□ -0.33
EFNA1-204ENST00000474413 CXorf65A6NEN9 183 aa12.97□□□□□ -0.33
EFNA1-204ENST00000474413 ZNF705DP0CH99 300 aaPredicted RBP12.97□□□□□ -0.33
EFNA1-204ENST00000474413 ZNF705BP0CI00 300 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms