RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 LINC00476Q8WZB0 136 aa14.89□□□□□ -0.03
SNX13-206ENST00000474067 NEU1Q99519 415 aa14.89□□□□□ -0.03
SNX13-206ENST00000474067 SEC22CQ9BRL7 303 aa14.89□□□□□ -0.03
SNX13-206ENST00000474067 ELOA3CA0A087WX78 387 aaPredicted RBP14.88□□□□□ -0.03
SNX13-206ENST00000474067 CCSO14618 274 aa14.88□□□□□ -0.03
SNX13-206ENST00000474067 PRAF2O60831 178 aa14.88□□□□□ -0.03
SNX13-206ENST00000474067 GATA2P23769 480 aaPredicted RBP14.88□□□□□ -0.03
SNX13-206ENST00000474067 Q6ZRG5 221 aa14.88□□□□□ -0.03
SNX13-206ENST00000474067 CSNK1G2-AS1Q8NCQ2 148 aa14.88□□□□□ -0.03
SNX13-206ENST00000474067 LRRC20Q8TCA0 184 aa14.88□□□□□ -0.03
SNX13-206ENST00000474067 ARL6Q9H0F7 186 aa14.88□□□□□ -0.03
SNX13-206ENST00000474067 XCL2Q9UBD3 114 aa14.88□□□□□ -0.03
SNX13-206ENST00000474067 GOLT1BQ9Y3E0 138 aa14.88□□□□□ -0.03
SNX13-206ENST00000474067 UPK1BO75841 260 aa14.87□□□□□ -0.03
SNX13-206ENST00000474067 LY6G6CO95867 125 aa14.87□□□□□ -0.03
SNX13-206ENST00000474067 DEFA1P59665 94 aa14.87□□□□□ -0.03
SNX13-206ENST00000474067 DEFA3P59666 94 aa14.87□□□□□ -0.03
SNX13-206ENST00000474067 PSG9Q00887 426 aa14.87□□□□□ -0.03
SNX13-206ENST00000474067 SLC38A11Q08AI6 406 aa14.87□□□□□ -0.03
SNX13-206ENST00000474067 BATF3Q9NR55 127 aa14.87□□□□□ -0.03
SNX13-206ENST00000474067 CLEC5AQ9NY25 188 aa14.87□□□□□ -0.03
SNX13-206ENST00000474067 DOK5Q9P104 306 aa14.87□□□□□ -0.03
SNX13-206ENST00000474067 RLN2P04090 185 aa14.86□□□□□ -0.03
SNX13-206ENST00000474067 CXCL2P19875 107 aa14.86□□□□□ -0.03
SNX13-206ENST00000474067 S100A11P31949 105 aa14.86□□□□□ -0.03
SNX13-206ENST00000474067 NANOS2P60321 138 aaKnown RBP14.86□□□□□ -0.03
SNX13-206ENST00000474067 S100A10P60903 97 aa14.86□□□□□ -0.03
SNX13-206ENST00000474067 FGL1Q08830 312 aa14.86□□□□□ -0.03
SNX13-206ENST00000474067 ARV1Q9H2C2 271 aa14.86□□□□□ -0.03
SNX13-206ENST00000474067 X6R8D5 127 aa14.86□□□□□ -0.03
SNX13-206ENST00000474067 AGRNO00468 2067 aa14.85□□□□□ -0.03
SNX13-206ENST00000474067 A0A0J9YX75 114 aa14.85□□□□□ -0.03
SNX13-206ENST00000474067 A6NHS1 94 aa14.85□□□□□ -0.03
SNX13-206ENST00000474067 AGPAT2O15120 278 aa14.85□□□□□ -0.03
SNX13-206ENST00000474067 COX7A2P2O60397 106 aa14.85□□□□□ -0.03
SNX13-206ENST00000474067 CYCSP99999 105 aaKnown RBP14.85□□□□□ -0.03
SNX13-206ENST00000474067 ATP6V1FQ16864 119 aa14.85□□□□□ -0.03
SNX13-206ENST00000474067 TMEM182Q6ZP80 229 aaPredicted RBP14.85□□□□□ -0.03
SNX13-206ENST00000474067 SCRT1Q9BWW7 348 aa14.85□□□□□ -0.03
SNX13-206ENST00000474067 LYRM2Q9NU23 88 aaPredicted RBP14.85□□□□□ -0.03
SNX13-206ENST00000474067 UQCC1Q9NVA1 299 aa14.85□□□□□ -0.03
SNX13-206ENST00000474067 CSMD3Q7Z407 3707 aa14.85□□□□□ -0.03
SNX13-206ENST00000474067 A0A087X0K7 114 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 TRAV10A0A0B4J240 114 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 DEFB4AO15263 64 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 IGKV3-20P01619 116 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 SULT1A1P50225 295 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 B2MP61769 119 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 FAM78BQ5VT40 261 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 ZNF705AQ6ZN79 300 aaPredicted RBP14.84□□□□□ -0.03
SNX13-206ENST00000474067 BPIFA4PQ86YQ2 179 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 OR1L4Q8NGR5 311 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 PFDN5Q99471 154 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 TENM2Q9NT68 2774 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 STARD9Q9P2P6 4700 aa14.84□□□□□ -0.03
SNX13-206ENST00000474067 CCNKO75909 580 aa14.83□□□□□ -0.04
SNX13-206ENST00000474067 CAMLGP49069 296 aa14.83□□□□□ -0.04
SNX13-206ENST00000474067 GDF5OSQ5U4N7 250 aa14.83□□□□□ -0.04
SNX13-206ENST00000474067 SLC50A1Q9BRV3 221 aa14.83□□□□□ -0.04
SNX13-206ENST00000474067 RFNGQ9Y644 331 aa14.83□□□□□ -0.04
SNX13-206ENST00000474067 RYR3Q15413 4870 aa14.82□□□□□ -0.04
SNX13-206ENST00000474067 MPDU1O75352 247 aa14.82□□□□□ -0.04
SNX13-206ENST00000474067 HBE1P02100 147 aa14.82□□□□□ -0.04
SNX13-206ENST00000474067 RBMY1A1P0DJD3 496 aaKnown RBP14.82□□□□□ -0.04
SNX13-206ENST00000474067 RBMY1CP0DJD4 496 aa14.82□□□□□ -0.04
SNX13-206ENST00000474067 RBMY1FQ15415 496 aaKnown RBP14.82□□□□□ -0.04
SNX13-206ENST00000474067 C10orf113Q5VZT2 155 aa14.82□□□□□ -0.04
SNX13-206ENST00000474067 LGALS9CQ6DKI2 356 aa14.82□□□□□ -0.04
SNX13-206ENST00000474067 LCN15Q6UWW0 184 aa14.82□□□□□ -0.04
SNX13-206ENST00000474067 LINC00305Q7Z4B0 112 aa14.82□□□□□ -0.04
SNX13-206ENST00000474067 ZNF738Q8NE65 137 aa14.82□□□□□ -0.04
SNX13-206ENST00000474067 PPP1R14DQ9NXH3 145 aa14.82□□□□□ -0.04
SNX13-206ENST00000474067 ZNF705FA8MVS1 300 aaPredicted RBP14.81□□□□□ -0.04
SNX13-206ENST00000474067 ZNF705DP0CH99 300 aaPredicted RBP14.81□□□□□ -0.04
SNX13-206ENST00000474067 ZNF705BP0CI00 300 aaPredicted RBP14.81□□□□□ -0.04
SNX13-206ENST00000474067 SPART-AS1P0CW21 52 aa14.81□□□□□ -0.04
SNX13-206ENST00000474067 HLA-DMBP28068 263 aa14.81□□□□□ -0.04
SNX13-206ENST00000474067 UHRF2Q96PU4 802 aa14.81□□□□□ -0.04
SNX13-206ENST00000474067 TMEM208Q9BTX3 173 aa14.81□□□□□ -0.04
SNX13-206ENST00000474067 SLC25A31Q9H0C2 315 aa14.81□□□□□ -0.04
SNX13-206ENST00000474067 CST7O76096 145 aa14.8□□□□□ -0.04
SNX13-206ENST00000474067 PET100P0DJ07 73 aa14.8□□□□□ -0.04
SNX13-206ENST00000474067 RAB32Q13637 225 aa14.8□□□□□ -0.04
SNX13-206ENST00000474067 NRARPQ7Z6K4 114 aa14.8□□□□□ -0.04
SNX13-206ENST00000474067 ZNF709Q8N972 641 aa14.8□□□□□ -0.04
SNX13-206ENST00000474067 WDR83OSQ9Y284 106 aa14.8□□□□□ -0.04
SNX13-206ENST00000474067 IGHV3OR16-12A0A075B7B8 117 aa14.79□□□□□ -0.04
SNX13-206ENST00000474067 FAM24AA6NFZ4 105 aa14.79□□□□□ -0.04
SNX13-206ENST00000474067 A8MTW9 85 aa14.79□□□□□ -0.04
SNX13-206ENST00000474067 INSP01308 110 aa14.79□□□□□ -0.04
SNX13-206ENST00000474067 BAXQ07812 192 aa14.79□□□□□ -0.04
SNX13-206ENST00000474067 ARL16Q0P5N6 197 aa14.79□□□□□ -0.04
SNX13-206ENST00000474067 GUK1Q16774 197 aa14.79□□□□□ -0.04
SNX13-206ENST00000474067 VWC2Q2TAL6 325 aa14.79□□□□□ -0.04
SNX13-206ENST00000474067 TMEM252Q8N6L7 170 aa14.79□□□□□ -0.04
SNX13-206ENST00000474067 IGF2BP2-AS1Q96M15 143 aa14.79□□□□□ -0.04
SNX13-206ENST00000474067 MGST2Q99735 147 aa14.79□□□□□ -0.04
SNX13-206ENST00000474067 NMES1Q9C002 83 aa14.79□□□□□ -0.04
SNX13-206ENST00000474067 DNAJC4Q9NNZ3 241 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms