RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 KIR2DL5BQ8NHK3 375 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 C16orf92Q96LL3 132 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 LINC00052Q96N35 136 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 RSG1Q9BU20 258 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 SLC25A32Q9H2D1 315 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 C17orf112F2Z3M2 114 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 GIPP09681 153 aaPredicted RBP10.18□□□□□ -0.78
USF1-205ENST00000473969 B2MP61769 119 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 ZNF124Q15973 351 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 LINC00305Q7Z4B0 112 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 LRRC20Q8TCA0 184 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 SCGB1C1Q8TD33 95 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 WWC2-AS2Q96NR7 200 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 UHRF2Q96PU4 802 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 PFDN5Q99471 154 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 SCRT1Q9BWW7 348 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 CSTL1Q9H114 145 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 DNAJC4Q9NNZ3 241 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 KCNIP2Q9NS61 270 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 SLC39A9Q9NUM3 307 aa10.18□□□□□ -0.78
USF1-205ENST00000473969 PSMB3P49720 205 aa10.17□□□□□ -0.78
USF1-205ENST00000473969 ACTL10Q5JWF8 245 aa10.17□□□□□ -0.78
USF1-205ENST00000473969 CHAC2Q8WUX2 184 aa10.17□□□□□ -0.78
USF1-205ENST00000473969 ATP5SQ99766 215 aa10.17□□□□□ -0.78
USF1-205ENST00000473969 PXMP4Q9Y6I8 212 aa10.17□□□□□ -0.78
USF1-205ENST00000473969 ISLRO14498 428 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 LYL1P12980 280 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 PRR20EP86478 221 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 PRR20CP86479 221 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 PRR20DP86480 221 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 PRR20BP86481 221 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 PRR20AP86496 221 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 OPCMLQ14982 345 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 PATE2Q6UY27 113 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 Q6ZWC4 215 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 BPIFA4PQ86YQ2 179 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 NPCDR1Q9BY65 106 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 SMIM3Q9BZL3 60 aa10.16□□□□□ -0.78
USF1-205ENST00000473969 WDR61Q9GZS3 305 aaKnown RBP10.16□□□□□ -0.78
USF1-205ENST00000473969 KNCNA6PVL3 124 aa10.15□□□□□ -0.78
USF1-205ENST00000473969 NUTF2P61970 127 aaKnown RBP10.15□□□□□ -0.78
USF1-205ENST00000473969 INO80EQ8NBZ0 244 aaPredicted RBP10.15□□□□□ -0.78
USF1-205ENST00000473969 GATAD1Q8WUU5 269 aa10.15□□□□□ -0.78
USF1-205ENST00000473969 RETNQ9HD89 108 aa10.15□□□□□ -0.78
USF1-205ENST00000473969 RPRMQ9NS64 109 aa10.15□□□□□ -0.78
USF1-205ENST00000473969 SPRY2O43597 315 aa10.14□□□□□ -0.79
USF1-205ENST00000473969 CA1P00915 261 aaPredicted RBP10.14□□□□□ -0.79
USF1-205ENST00000473969 SPP1P10451 314 aa10.14□□□□□ -0.79
USF1-205ENST00000473969 DEFB135Q30KP9 77 aa10.14□□□□□ -0.79
USF1-205ENST00000473969 EBLN2Q6P2I7 272 aa10.14□□□□□ -0.79
USF1-205ENST00000473969 MORN3Q6PF18 240 aaPredicted RBP10.14□□□□□ -0.79
USF1-205ENST00000473969 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.14□□□□□ -0.79
USF1-205ENST00000473969 OR2T35Q8NGX2 323 aa10.14□□□□□ -0.79
USF1-205ENST00000473969 TMEM37Q8WXS4 190 aa10.14□□□□□ -0.79
USF1-205ENST00000473969 TP53TG1Q9Y2A0 90 aa10.14□□□□□ -0.79
USF1-205ENST00000473969 SOCS3O14543 225 aa10.13□□□□□ -0.79
USF1-205ENST00000473969 TMEM41BQ5BJD5 291 aa10.13□□□□□ -0.79
USF1-205ENST00000473969 SPATA31B1PQ5VZV4 182 aa10.13□□□□□ -0.79
USF1-205ENST00000473969 FXYD6-FXYD2A0A087WZ82 144 aa10.12□□□□□ -0.79
USF1-205ENST00000473969 CXCL2P19875 107 aa10.12□□□□□ -0.79
USF1-205ENST00000473969 ZNF266Q14584 549 aa10.12□□□□□ -0.79
USF1-205ENST00000473969 FAM78BQ5VT40 261 aa10.12□□□□□ -0.79
USF1-205ENST00000473969 FOXI2Q6ZQN5 318 aa10.12□□□□□ -0.79
USF1-205ENST00000473969 TRPT1Q86TN4 253 aaKnown RBP10.12□□□□□ -0.79
USF1-205ENST00000473969 RNF183Q96D59 192 aa10.12□□□□□ -0.79
USF1-205ENST00000473969 OVOL2Q9BRP0 275 aa10.12□□□□□ -0.79
USF1-205ENST00000473969 A0A087X0K7 114 aa10.11□□□□□ -0.79
USF1-205ENST00000473969 H3BMM0 161 aa10.11□□□□□ -0.79
USF1-205ENST00000473969 HLA-DRB4P13762 266 aa10.11□□□□□ -0.79
USF1-205ENST00000473969 LCN15Q6UWW0 184 aa10.11□□□□□ -0.79
USF1-205ENST00000473969 ZNF738Q8NE65 137 aa10.11□□□□□ -0.79
USF1-205ENST00000473969 OR4B1Q8NGF8 309 aa10.11□□□□□ -0.79
USF1-205ENST00000473969 AQP10Q96PS8 301 aa10.11□□□□□ -0.79
USF1-205ENST00000473969 SLC50A1Q9BRV3 221 aa10.11□□□□□ -0.79
USF1-205ENST00000473969 C1QTNF4Q9BXJ3 329 aa10.11□□□□□ -0.79
USF1-205ENST00000473969 PARD6GQ9BYG4 376 aaPredicted RBP10.11□□□□□ -0.79
USF1-205ENST00000473969 SAV1Q9H4B6 383 aaPredicted RBP10.11□□□□□ -0.79
USF1-205ENST00000473969 HLA-DRB4X5D2U9 266 aa10.11□□□□□ -0.79
USF1-205ENST00000473969 DNAH9Q9NYC9 4486 aa10.11□□□□□ -0.79
USF1-205ENST00000473969 TRAV5A0A0B4J249 113 aa10.1□□□□□ -0.79
USF1-205ENST00000473969 IGKV3-20P01619 116 aa10.1□□□□□ -0.79
USF1-205ENST00000473969 GUK1Q16774 197 aa10.1□□□□□ -0.79
USF1-205ENST00000473969 Q5BKY6 102 aa10.1□□□□□ -0.79
USF1-205ENST00000473969 FFAR4Q5NUL3 377 aa10.1□□□□□ -0.79
USF1-205ENST00000473969 RARRES2Q99969 163 aa10.1□□□□□ -0.79
USF1-205ENST00000473969 CLEC5AQ9NY25 188 aa10.1□□□□□ -0.79
USF1-205ENST00000473969 BORCS7-ASMTA0A0B4J1R7 106 aa10.09□□□□□ -0.79
USF1-205ENST00000473969 DUSP14O95147 198 aaKnown RBP10.09□□□□□ -0.79
USF1-205ENST00000473969 ACOT6Q3I5F7 207 aaPredicted RBP10.09□□□□□ -0.79
USF1-205ENST00000473969 GCSAMLQ5JQS6 135 aa10.09□□□□□ -0.79
USF1-205ENST00000473969 MORN5Q5VZ52 161 aa10.09□□□□□ -0.79
USF1-205ENST00000473969 IGFL4Q6B9Z1 124 aa10.09□□□□□ -0.79
USF1-205ENST00000473969 MRPL32Q9BYC8 188 aaKnown RBP10.09□□□□□ -0.79
USF1-205ENST00000473969 HRH4Q9H3N8 390 aa10.09□□□□□ -0.79
USF1-205ENST00000473969 WFDC1Q9HC57 220 aa10.09□□□□□ -0.79
USF1-205ENST00000473969 PPP1R14DQ9NXH3 145 aa10.09□□□□□ -0.79
USF1-205ENST00000473969 MRPS12O15235 138 aaKnown RBP10.08□□□□□ -0.8
USF1-205ENST00000473969 SNRPCP09234 159 aaKnown RBP10.08□□□□□ -0.8
USF1-205ENST00000473969 PSG3Q16557 428 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms