RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 SLC38A11Q08AI6 406 aa12.4□□□□□ -0.42
COMMD3-210ENST00000472610 EBLN2Q6P2I7 272 aa12.4□□□□□ -0.42
COMMD3-210ENST00000472610 CEMP1Q6PRD7 247 aaPredicted RBP12.4□□□□□ -0.42
COMMD3-210ENST00000472610 CSNK1G2-AS1Q8NCQ2 148 aa12.4□□□□□ -0.42
COMMD3-210ENST00000472610 C11orf45Q8TAV5 145 aa12.4□□□□□ -0.42
COMMD3-210ENST00000472610 SCRT1Q9BWW7 348 aa12.4□□□□□ -0.42
COMMD3-210ENST00000472610 ARL6Q9H0F7 186 aa12.4□□□□□ -0.42
COMMD3-210ENST00000472610 KLK5Q9Y337 293 aaPredicted RBP12.4□□□□□ -0.42
COMMD3-210ENST00000472610 FAM24AA6NFZ4 105 aa12.39□□□□□ -0.43
COMMD3-210ENST00000472610 INMT-MINDY4F8WBC2 141 aa12.39□□□□□ -0.43
COMMD3-210ENST00000472610 RAB31Q13636 194 aa12.39□□□□□ -0.43
COMMD3-210ENST00000472610 RAB32Q13637 225 aa12.39□□□□□ -0.43
COMMD3-210ENST00000472610 NRARPQ7Z6K4 114 aa12.39□□□□□ -0.43
COMMD3-210ENST00000472610 LYRM2Q9NU23 88 aaPredicted RBP12.39□□□□□ -0.43
COMMD3-210ENST00000472610 CLEC5AQ9NY25 188 aa12.39□□□□□ -0.43
COMMD3-210ENST00000472610 CST7O76096 145 aa12.38□□□□□ -0.43
COMMD3-210ENST00000472610 S100A11P31949 105 aa12.38□□□□□ -0.43
COMMD3-210ENST00000472610 SULT1A1P50225 295 aa12.38□□□□□ -0.43
COMMD3-210ENST00000472610 GDF5OSQ5U4N7 250 aa12.38□□□□□ -0.43
COMMD3-210ENST00000472610 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.38□□□□□ -0.43
COMMD3-210ENST00000472610 Q8NAQ8 132 aa12.38□□□□□ -0.43
COMMD3-210ENST00000472610 ARV1Q9H2C2 271 aa12.38□□□□□ -0.43
COMMD3-210ENST00000472610 XCL2Q9UBD3 114 aa12.38□□□□□ -0.43
COMMD3-210ENST00000472610 RLN2P04090 185 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 HBG1P69891 147 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 HBG2P69892 147 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 CYCSP99999 105 aaKnown RBP12.37□□□□□ -0.43
COMMD3-210ENST00000472610 PATE2Q6UY27 113 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 STX12Q86Y82 276 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 TMEM252Q8N6L7 170 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 OR4B1Q8NGF8 309 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 PHLDA1Q8WV24 401 aaPredicted RBP12.37□□□□□ -0.43
COMMD3-210ENST00000472610 C17orf77Q96MU5 243 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 UHRF2Q96PU4 802 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 MGST2Q99735 147 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 MARVELD1Q9BSK0 173 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 UQCC1Q9NVA1 299 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 X6R8D5 127 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 STARD9Q9P2P6 4700 aa12.37□□□□□ -0.43
COMMD3-210ENST00000472610 ELOA3CA0A087WX78 387 aaPredicted RBP12.36□□□□□ -0.43
COMMD3-210ENST00000472610 IGHV4-28A0A0C4DH34 117 aa12.36□□□□□ -0.43
COMMD3-210ENST00000472610 A0A0J9YX75 114 aa12.36□□□□□ -0.43
COMMD3-210ENST00000472610 DEFB4AO15263 64 aa12.36□□□□□ -0.43
COMMD3-210ENST00000472610 IGKV3-20P01619 116 aa12.36□□□□□ -0.43
COMMD3-210ENST00000472610 CAMLGP49069 296 aa12.36□□□□□ -0.43
COMMD3-210ENST00000472610 DEFB1P60022 68 aa12.36□□□□□ -0.43
COMMD3-210ENST00000472610 FGL1Q08830 312 aa12.36□□□□□ -0.43
COMMD3-210ENST00000472610 ATP6V1FQ16864 119 aa12.36□□□□□ -0.43
COMMD3-210ENST00000472610 VWC2Q2TAL6 325 aa12.36□□□□□ -0.43
COMMD3-210ENST00000472610 Q6ZRG5 221 aa12.36□□□□□ -0.43
COMMD3-210ENST00000472610 NMES1Q9C002 83 aa12.36□□□□□ -0.43
COMMD3-210ENST00000472610 HRH4Q9H3N8 390 aa12.36□□□□□ -0.43
COMMD3-210ENST00000472610 A0A087X0K7 114 aa12.35□□□□□ -0.43
COMMD3-210ENST00000472610 RBMY1A1P0DJD3 496 aaKnown RBP12.35□□□□□ -0.43
COMMD3-210ENST00000472610 RBMY1CP0DJD4 496 aa12.35□□□□□ -0.43
COMMD3-210ENST00000472610 NANOS2P60321 138 aaKnown RBP12.35□□□□□ -0.43
COMMD3-210ENST00000472610 PSG9Q00887 426 aa12.35□□□□□ -0.43
COMMD3-210ENST00000472610 RBMY1FQ15415 496 aaKnown RBP12.35□□□□□ -0.43
COMMD3-210ENST00000472610 FAM78BQ5VT40 261 aa12.35□□□□□ -0.43
COMMD3-210ENST00000472610 LINC00305Q7Z4B0 112 aa12.35□□□□□ -0.43
COMMD3-210ENST00000472610 C20orf173Q96LM9 149 aa12.35□□□□□ -0.43
COMMD3-210ENST00000472610 WDR83OSQ9Y284 106 aa12.35□□□□□ -0.43
COMMD3-210ENST00000472610 RYR3Q15413 4870 aa12.35□□□□□ -0.43
COMMD3-210ENST00000472610 IGSF23A1L1A6 192 aa12.34□□□□□ -0.43
COMMD3-210ENST00000472610 F6UB75 175 aa12.34□□□□□ -0.43
COMMD3-210ENST00000472610 COX7A2P2O60397 106 aa12.34□□□□□ -0.43
COMMD3-210ENST00000472610 DUSP14O95147 198 aaKnown RBP12.34□□□□□ -0.43
COMMD3-210ENST00000472610 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
COMMD3-210ENST00000472610 NEU1Q99519 415 aa12.34□□□□□ -0.43
COMMD3-210ENST00000472610 TRAV8-2A0A0B4J237 113 aa12.33□□□□□ -0.44
COMMD3-210ENST00000472610 SMIM9A6NGZ8 99 aa12.33□□□□□ -0.44
COMMD3-210ENST00000472610 E5RGE8 158 aa12.33□□□□□ -0.44
COMMD3-210ENST00000472610 SIX6O95475 246 aa12.33□□□□□ -0.44
COMMD3-210ENST00000472610 FXYD7P58549 80 aa12.33□□□□□ -0.44
COMMD3-210ENST00000472610 C10orf113Q5VZT2 155 aa12.33□□□□□ -0.44
COMMD3-210ENST00000472610 ZNF705AQ6ZN79 300 aaPredicted RBP12.33□□□□□ -0.44
COMMD3-210ENST00000472610 BPIFA4PQ86YQ2 179 aa12.33□□□□□ -0.44
COMMD3-210ENST00000472610 OR1L4Q8NGR5 311 aa12.33□□□□□ -0.44
COMMD3-210ENST00000472610 CHAC2Q8WUX2 184 aa12.33□□□□□ -0.44
COMMD3-210ENST00000472610 TMEM37Q8WXS4 190 aa12.33□□□□□ -0.44
COMMD3-210ENST00000472610 SLC25A31Q9H0C2 315 aa12.33□□□□□ -0.44
COMMD3-210ENST00000472610 DNAJC4Q9NNZ3 241 aa12.33□□□□□ -0.44
COMMD3-210ENST00000472610 DYNC2H1Q8NCM8 4307 aaKnown RBP12.32□□□□□ -0.44
COMMD3-210ENST00000472610 A8MTW9 85 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 C11orf94C9JXX5 98 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 MRPS12O15235 138 aaKnown RBP12.32□□□□□ -0.44
COMMD3-210ENST00000472610 MPDU1O75352 247 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 CXCL2P19875 107 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 RPL29P47914 159 aaKnown RBP12.32□□□□□ -0.44
COMMD3-210ENST00000472610 PRR20EP86478 221 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 PRR20CP86479 221 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 PRR20DP86480 221 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 PRR20BP86481 221 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 PRR20AP86496 221 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 BAXQ07812 192 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 ZNF709Q8N972 641 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 PFDN5Q99471 154 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 SLC35B3Q9H1N7 401 aa12.32□□□□□ -0.44
COMMD3-210ENST00000472610 UBE2L5PA0A1B0GUS4 154 aa12.31□□□□□ -0.44
COMMD3-210ENST00000472610 ZNF705FA8MVS1 300 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms