RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 CYP2G1PQ6ZSU1 146 aa16.1■□□□□ 0.17
C9orf3-213ENST00000471978 C1orf158Q8N1D5 194 aa16.1■□□□□ 0.17
C9orf3-213ENST00000471978 DKK2Q9UBU2 259 aa16.1■□□□□ 0.17
C9orf3-213ENST00000471978 TEX48A0A1B0GUV7 120 aa16.09■□□□□ 0.17
C9orf3-213ENST00000471978 HBE1P02100 147 aa16.09■□□□□ 0.17
C9orf3-213ENST00000471978 IL5P05113 134 aa16.09■□□□□ 0.17
C9orf3-213ENST00000471978 FAM222AQ5U5X8 452 aa16.09■□□□□ 0.17
C9orf3-213ENST00000471978 POM121L12Q8N7R1 296 aa16.09■□□□□ 0.17
C9orf3-213ENST00000471978 PMS2P5A8MQ11 134 aa16.08■□□□□ 0.16
C9orf3-213ENST00000471978 C4orf46Q504U0 113 aa16.08■□□□□ 0.16
C9orf3-213ENST00000471978 IGFL4Q6B9Z1 124 aa16.08■□□□□ 0.16
C9orf3-213ENST00000471978 SMIM8Q96KF7 97 aa16.08■□□□□ 0.16
C9orf3-213ENST00000471978 NIPSNAP3BQ9BS92 247 aa16.08■□□□□ 0.16
C9orf3-213ENST00000471978 SLC25A39Q9BZJ4 359 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-213ENST00000471978 LOC102723971A0A1B0GUV8 181 aa16.07■□□□□ 0.16
C9orf3-213ENST00000471978 CENPXA8MT69 81 aa16.07■□□□□ 0.16
C9orf3-213ENST00000471978 A8MTW9 85 aa16.07■□□□□ 0.16
C9orf3-213ENST00000471978 H3BRN7 92 aa16.07■□□□□ 0.16
C9orf3-213ENST00000471978 HYPMO75409 117 aa16.07■□□□□ 0.16
C9orf3-213ENST00000471978 ANXA7P20073 488 aaKnown RBP16.07■□□□□ 0.16
C9orf3-213ENST00000471978 RAP2BP61225 183 aa16.07■□□□□ 0.16
C9orf3-213ENST00000471978 FGL1Q08830 312 aa16.07■□□□□ 0.16
C9orf3-213ENST00000471978 RRN3P1Q2M238 152 aa16.07■□□□□ 0.16
C9orf3-213ENST00000471978 AMTNQ6UX39 209 aa16.07■□□□□ 0.16
C9orf3-213ENST00000471978 SHANK2-AS3Q9BTD1 123 aa16.07■□□□□ 0.16
C9orf3-213ENST00000471978 PLA2G2EQ9NZK7 142 aa16.07■□□□□ 0.16
C9orf3-213ENST00000471978 HIGD1AQ9Y241 93 aa16.07■□□□□ 0.16
C9orf3-213ENST00000471978 FAT2Q9NYQ8 4349 aa16.06■□□□□ 0.16
C9orf3-213ENST00000471978 HERC2O95714 4834 aa16.06■□□□□ 0.16
C9orf3-213ENST00000471978 TRAV8-2A0A0B4J237 113 aa16.06■□□□□ 0.16
C9orf3-213ENST00000471978 CCNKO75909 580 aa16.06■□□□□ 0.16
C9orf3-213ENST00000471978 DUSP14O95147 198 aaKnown RBP16.06■□□□□ 0.16
C9orf3-213ENST00000471978 CNN1P51911 297 aaKnown RBP16.06■□□□□ 0.16
C9orf3-213ENST00000471978 RRAS2P62070 204 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-213ENST00000471978 RNF182Q8N6D2 247 aa16.06■□□□□ 0.16
C9orf3-213ENST00000471978 IGF2BP2-AS1Q96M15 143 aa16.06■□□□□ 0.16
C9orf3-213ENST00000471978 SDHCQ99643 169 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-213ENST00000471978 TMEM208Q9BTX3 173 aa16.06■□□□□ 0.16
C9orf3-213ENST00000471978 YTHDF2Q9Y5A9 579 aaKnown RBP16.06■□□□□ 0.16
C9orf3-213ENST00000471978 SCGB1D2O95969 90 aa16.05■□□□□ 0.16
C9orf3-213ENST00000471978 METTL15P1P0C7V9 234 aa16.05■□□□□ 0.16
C9orf3-213ENST00000471978 LINC00869P0C866 280 aa16.05■□□□□ 0.16
C9orf3-213ENST00000471978 BTCP35070 178 aa16.05■□□□□ 0.16
C9orf3-213ENST00000471978 SELENOTP62341 195 aa16.05■□□□□ 0.16
C9orf3-213ENST00000471978 DLK1P80370 383 aa16.05■□□□□ 0.16
C9orf3-213ENST00000471978 IAH1Q2TAA2 248 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-213ENST00000471978 DNAH17Q9UFH2 4485 aa16.04■□□□□ 0.16
C9orf3-213ENST00000471978 OR5G3P0C626 314 aa16.04■□□□□ 0.16
C9orf3-213ENST00000471978 RPL7P18124 248 aaKnown RBP16.04■□□□□ 0.16
C9orf3-213ENST00000471978 PLP1P60201 277 aa16.04■□□□□ 0.16
C9orf3-213ENST00000471978 TMEM14EPQ6UXP3 125 aa16.04■□□□□ 0.16
C9orf3-213ENST00000471978 OR11H7Q8NGC8 314 aa16.04■□□□□ 0.16
C9orf3-213ENST00000471978 FAM210BQ96KR6 192 aa16.04■□□□□ 0.16
C9orf3-213ENST00000471978 NPVFQ9HCQ7 196 aa16.04■□□□□ 0.16
C9orf3-213ENST00000471978 M0R2Z0 102 aa16.03■□□□□ 0.16
C9orf3-213ENST00000471978 HTN3P15516 51 aa16.03■□□□□ 0.16
C9orf3-213ENST00000471978 OXA1LQ15070 435 aa16.03■□□□□ 0.16
C9orf3-213ENST00000471978 SPINK13Q1W4C9 94 aa16.03■□□□□ 0.16
C9orf3-213ENST00000471978 ZNF738Q8NE65 137 aa16.03■□□□□ 0.16
C9orf3-213ENST00000471978 OR10P1Q8NGE3 313 aa16.03■□□□□ 0.16
C9orf3-213ENST00000471978 UHRF2Q96PU4 802 aa16.03■□□□□ 0.16
C9orf3-213ENST00000471978 GSKIPQ9P0R6 139 aa16.03■□□□□ 0.16
C9orf3-213ENST00000471978 MGAT4CQ9UBM8 478 aa16.03■□□□□ 0.16
C9orf3-213ENST00000471978 FNDC10F2Z333 226 aa16.02■□□□□ 0.16
C9orf3-213ENST00000471978 INSP01308 110 aa16.02■□□□□ 0.16
C9orf3-213ENST00000471978 LINC00336Q6ZUF6 198 aa16.02■□□□□ 0.16
C9orf3-213ENST00000471978 S100A7AQ86SG5 101 aa16.02■□□□□ 0.16
C9orf3-213ENST00000471978 ZBTB8BQ8NAP8 495 aaPredicted RBP16.02■□□□□ 0.16
C9orf3-213ENST00000471978 ARL6Q9H0F7 186 aa16.02■□□□□ 0.16
C9orf3-213ENST00000471978 TSC22D2O75157 780 aa16.01■□□□□ 0.15
C9orf3-213ENST00000471978 IL7P13232 177 aa16.01■□□□□ 0.15
C9orf3-213ENST00000471978 TAS2R30P59541 319 aa16.01■□□□□ 0.15
C9orf3-213ENST00000471978 DAD1P61803 113 aa16.01■□□□□ 0.15
C9orf3-213ENST00000471978 TEPPQ6URK8 271 aa16.01■□□□□ 0.15
C9orf3-213ENST00000471978 MITD1Q8WV92 249 aa16.01■□□□□ 0.15
C9orf3-213ENST00000471978 K7EPK0 472 aa16■□□□□ 0.15
C9orf3-213ENST00000471978 M0R2N4 97 aa16■□□□□ 0.15
C9orf3-213ENST00000471978 CRXO43186 299 aaPredicted RBP16■□□□□ 0.15
C9orf3-213ENST00000471978 SLC38A11Q08AI6 406 aa16■□□□□ 0.15
C9orf3-213ENST00000471978 CNPY1Q3B7I2 92 aa16■□□□□ 0.15
C9orf3-213ENST00000471978 PATE2Q6UY27 113 aa16■□□□□ 0.15
C9orf3-213ENST00000471978 UBE2DNLQ8IWF7 75 aa16■□□□□ 0.15
C9orf3-213ENST00000471978 LRRC20Q8TCA0 184 aa16■□□□□ 0.15
C9orf3-213ENST00000471978 RCL1Q9Y2P8 373 aaKnown RBP16■□□□□ 0.15
C9orf3-213ENST00000471978 A0A087X0K7 114 aa15.99■□□□□ 0.15
C9orf3-213ENST00000471978 ZNF705GA8MUZ8 300 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-213ENST00000471978 PRM2P04554 102 aa15.99■□□□□ 0.15
C9orf3-213ENST00000471978 CXCL3P19876 107 aa15.99■□□□□ 0.15
C9orf3-213ENST00000471978 BAP18Q8IXM2 172 aa15.99■□□□□ 0.15
C9orf3-213ENST00000471978 ARV1Q9H2C2 271 aa15.99■□□□□ 0.15
C9orf3-213ENST00000471978 MBPP02686 304 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-213ENST00000471978 B2MP61769 119 aa15.98■□□□□ 0.15
C9orf3-213ENST00000471978 HIST1H1AQ02539 215 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-213ENST00000471978 ARL16Q0P5N6 197 aa15.98■□□□□ 0.15
C9orf3-213ENST00000471978 RNF24Q9Y225 148 aa15.98■□□□□ 0.15
C9orf3-213ENST00000471978 TRAV12-2A0A075B6T6 113 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 C7orf66A4D0T2 115 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 BOLA2-SMG1P6H3BVE0 249 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 GOSR2O14653 212 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 RHOBP62745 196 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms