RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 GPR82Q96P67 336 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 SCGB3A2Q96PL1 93 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 PRRT1Q99946 306 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 HSPB7Q9UBY9 170 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 SLC45A2Q9UMX9 530 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 TMEM56-RWDD3S4R434 201 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 ZNF561-AS1K7EIQ3 104 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 NXPH3O95157 252 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 ANXA3P12429 323 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 ZNF182P17025 639 aaPredicted RBP6.43□□□□□ -1.38
CPSF4-211ENST00000471455 AKR1C4P17516 323 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 TSPOP30536 169 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 DEFB1P60022 68 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 VBP1P61758 197 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 RAB11AP62491 216 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 SMCO1Q147U7 214 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 TTC32Q5I0X7 151 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 GGNBP1Q5YKI7 109 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 GPR141Q7Z602 305 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 TRGV9Q99603 122 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 FUNDC2Q9BWH2 189 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 KRTAP3-1Q9BYR8 98 aa6.43□□□□□ -1.38
CPSF4-211ENST00000471455 A0A0B4J2A0 478 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 C9orf118A6NHY6 69 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 A8MTW9 85 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 F5H768 121 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 F6UB75 175 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 NUDT3O95989 172 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 ATP5G1P05496 136 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 AKAIN1P0CW23 69 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 DEFB130BP0DP73 79 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 DEFB130AP0DP74 79 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 ATP5G3P48201 142 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 RPP30P78346 268 aaKnown RBP6.42□□□□□ -1.38
CPSF4-211ENST00000471455 ZNF90Q03938 601 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 GAMTQ14353 236 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 CLINT1Q14677 625 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 TMEM256Q8N2U0 113 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 NUDT10Q8NFP7 164 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 OR4D5Q8NGN0 318 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 OR1B1Q8NGR6 318 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 OR1S1Q8NH92 325 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 ZNRF2Q8NHG8 242 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 NUDT11Q96G61 164 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 RTBDNQ9BSG5 229 aaPredicted RBP6.42□□□□□ -1.38
CPSF4-211ENST00000471455 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 RBKSQ9H477 322 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 RABL2AQ9UBK7 228 aaPredicted RBP6.42□□□□□ -1.38
CPSF4-211ENST00000471455 SHPKQ9UHJ6 478 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 RABL2BQ9UNT1 228 aa6.42□□□□□ -1.38
CPSF4-211ENST00000471455 HSPG2P98160 4391 aa6.41□□□□□ -1.38
CPSF4-211ENST00000471455 OR2F1Q13607 317 aa6.41□□□□□ -1.38
CPSF4-211ENST00000471455 S100A7AQ86SG5 101 aa6.41□□□□□ -1.38
CPSF4-211ENST00000471455 Q8N1X5 172 aa6.41□□□□□ -1.38
CPSF4-211ENST00000471455 BPIFCQ8NFQ6 507 aa6.41□□□□□ -1.38
CPSF4-211ENST00000471455 SMIM4Q8WVI0 70 aa6.41□□□□□ -1.38
CPSF4-211ENST00000471455 TMEM147Q9BVK8 224 aa6.41□□□□□ -1.38
CPSF4-211ENST00000471455 SLC25A22Q9H936 323 aa6.41□□□□□ -1.38
CPSF4-211ENST00000471455 PPP1R14DQ9NXH3 145 aa6.41□□□□□ -1.38
CPSF4-211ENST00000471455 SCP2D1Q9UJQ7 156 aa6.41□□□□□ -1.38
CPSF4-211ENST00000471455 GPR132Q9UNW8 380 aa6.41□□□□□ -1.38
CPSF4-211ENST00000471455 IGKV1D-37A0A075B6S9 117 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 DUXBA0A1W2PPF3 345 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 CBY3A6NI87 242 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 ZNF705GA8MUZ8 300 aaPredicted RBP6.4□□□□□ -1.38
CPSF4-211ENST00000471455 BOLA2-SMG1P6H3BVE0 249 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 RGS5O15539 181 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 MED6O75586 246 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 ADAP1O75689 374 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 BTF3P20290 206 aaKnown RBP6.4□□□□□ -1.38
CPSF4-211ENST00000471455 CNN1P51911 297 aaKnown RBP6.4□□□□□ -1.38
CPSF4-211ENST00000471455 SPINK13Q1W4C9 94 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 FAAP20Q6NZ36 180 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 AMTNQ6UX39 209 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 CLVS1Q8IUQ0 354 aaPredicted RBP6.4□□□□□ -1.38
CPSF4-211ENST00000471455 THAP8Q8NA92 274 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 OR11H7Q8NGC8 314 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 OR10J6PQ8NGY7 276 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 C16orf74Q96GX8 76 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 CIB3Q96Q77 187 aaPredicted RBP6.4□□□□□ -1.38
CPSF4-211ENST00000471455 RSG1Q9BU20 258 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 SLC25A32Q9H2D1 315 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 PAIP2BQ9ULR5 123 aaKnown RBP6.4□□□□□ -1.38
CPSF4-211ENST00000471455 RNF24Q9Y225 148 aa6.4□□□□□ -1.38
CPSF4-211ENST00000471455 ZNF98A6NK75 572 aa6.39□□□□□ -1.39
CPSF4-211ENST00000471455 M0R2Z0 102 aa6.39□□□□□ -1.39
CPSF4-211ENST00000471455 RPL7P18124 248 aaKnown RBP6.39□□□□□ -1.39
CPSF4-211ENST00000471455 TAS2R60P59551 318 aa6.39□□□□□ -1.39
CPSF4-211ENST00000471455 ZNF493Q6ZR52 646 aa6.39□□□□□ -1.39
CPSF4-211ENST00000471455 SPATA12Q7Z6I5 190 aa6.39□□□□□ -1.39
CPSF4-211ENST00000471455 ZNF738Q8NE65 137 aa6.39□□□□□ -1.39
CPSF4-211ENST00000471455 OR51S1Q8NGJ8 323 aa6.39□□□□□ -1.39
CPSF4-211ENST00000471455 LINC01587Q99440 93 aa6.39□□□□□ -1.39
CPSF4-211ENST00000471455 SCRT2Q9NQ03 307 aa6.39□□□□□ -1.39
CPSF4-211ENST00000471455 LRP1BQ9NZR2 4599 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 A0A1W2PPQ1 181 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 CTDSPLO15194 276 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 ORM2P19652 201 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 RAP2BP61225 183 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 RHOBP62745 196 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms