RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 A0A0A6YYH2 397 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 TRAV26-2A0A0B4J265 109 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 OR4C46A6NHA9 309 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 A6NJ64 397 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 HSBP1L1C9JCN9 74 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 CALUO43852 315 aaPredicted RBP-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 SULT1C4O75897 302 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 TNNC2P02585 160 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 PPIBP23284 216 aaKnown RBP-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 HADHBP55084 474 aaKnown RBP-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 DEFA1P59665 94 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 UBE2G2P60604 165 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 GLYATL3Q5SZD4 288 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 C22orf39Q6P5X5 142 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 CD200R1LQ6Q8B3 271 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 ARPINQ7Z6K5 226 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 C5orf17Q8NAS9 161 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 OR51A2Q8NGJ7 313 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 PPP1R2P1Q96PQ5 205 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 PKIGQ9Y2B9 76 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 JMJD1CQ15652 2540 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 ECM29Q5VYK3 1845 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 SPTBP11277 2137 aa-0.8□□□□□ -2.54
COMMD3-209ENST00000471350 FREM3P0C091 2139 aa-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 RNASE4P34096 147 aaKnown RBP-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 COX6A2Q02221 97 aa-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 BCL2L15Q5TBC7 163 aa-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 C1orf134Q5TEV5 83 aa-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 CLEC6AQ6EIG7 209 aa-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 PATE2Q6UY27 113 aa-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 ZGRF1Q86YA3 2104 aa-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 OR6V1Q8N148 313 aa-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 ZNF75CPQ92670 426 aaPredicted RBP-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 TMEM133Q9H2Q1 129 aa-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 TVP23BQ9NYZ1 205 aa-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 USE1Q9NZ43 259 aa-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 NOSIPQ9Y314 301 aaKnown RBP-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 FANCMQ8IYD8 2048 aa-0.81□□□□□ -2.54
COMMD3-209ENST00000471350 TNXBP22105 4242 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 KMT2AQ03164 3969 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 FAM159BA6NKW6 160 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 SMIM17P0DL12 118 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 PDE6GP18545 87 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 RAB5CP51148 216 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 RANP62826 216 aaKnown RBP-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 XAF1Q6GPH4 301 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 IDO2Q6ZQW0 420 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 S100A7AQ86SG5 101 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 TMEM86BQ8N661 226 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 CT55Q8WUE5 264 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 CMSS1Q9BQ75 279 aaKnown RBP-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 MRPS26Q9BYN8 205 aaKnown RBP-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 TMEM126AQ9H061 195 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 MRPL27Q9P0M9 148 aaKnown RBP-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 ARL5AQ9Y689 179 aa-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 WRNQ14191 1432 aaPredicted RBP eCLIP-0.82□□□□□ -2.54
COMMD3-209ENST00000471350 hCG_1818297A0A087WSY0 165 aa-0.83□□□□□ -2.54
COMMD3-209ENST00000471350 A6NN06 94 aa-0.83□□□□□ -2.54
COMMD3-209ENST00000471350 A8MT66 165 aa-0.83□□□□□ -2.54
COMMD3-209ENST00000471350 DEXIO95424 95 aa-0.83□□□□□ -2.54
COMMD3-209ENST00000471350 IGHV3-33P01772 117 aa-0.83□□□□□ -2.54
COMMD3-209ENST00000471350 ETV6P41212 452 aa-0.83□□□□□ -2.54
COMMD3-209ENST00000471350 ACOT6Q3I5F7 207 aaPredicted RBP-0.83□□□□□ -2.54
COMMD3-209ENST00000471350 KRTAP19-7Q3SYF9 63 aa-0.83□□□□□ -2.54
COMMD3-209ENST00000471350 EIF5AL1Q6IS14 154 aaKnown RBP-0.83□□□□□ -2.54
COMMD3-209ENST00000471350 Q6Q795 121 aa-0.83□□□□□ -2.54
COMMD3-209ENST00000471350 OR5D16Q8NGK9 328 aa-0.83□□□□□ -2.54
COMMD3-209ENST00000471350 POP5Q969H6 163 aaKnown RBP-0.83□□□□□ -2.54
COMMD3-209ENST00000471350 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.84□□□□□ -2.54
COMMD3-209ENST00000471350 MYCBP2O75592 4640 aa-0.84□□□□□ -2.54
COMMD3-209ENST00000471350 A0A0J9YY99 117 aa-0.84□□□□□ -2.54
COMMD3-209ENST00000471350 B4DSR2 109 aa-0.84□□□□□ -2.54
COMMD3-209ENST00000471350 EVI2AP22794 236 aa-0.84□□□□□ -2.54
COMMD3-209ENST00000471350 SULT1A1P50225 295 aa-0.84□□□□□ -2.54
COMMD3-209ENST00000471350 SKP1P63208 163 aa-0.84□□□□□ -2.54
COMMD3-209ENST00000471350 LRRC18Q8N456 261 aa-0.84□□□□□ -2.54
COMMD3-209ENST00000471350 LIMD2Q9BT23 127 aa-0.84□□□□□ -2.54
COMMD3-209ENST00000471350 PARD6GQ9BYG4 376 aaPredicted RBP-0.84□□□□□ -2.54
COMMD3-209ENST00000471350 LPAP08519 4548 aa-0.84□□□□□ -2.54
COMMD3-209ENST00000471350 ROBO3Q96MS0 1386 aa-0.84□□□□□ -2.54
COMMD3-209ENST00000471350 TTRP02766 147 aa-0.85□□□□□ -2.55
COMMD3-209ENST00000471350 CALB1P05937 261 aa-0.85□□□□□ -2.55
COMMD3-209ENST00000471350 C8GP07360 202 aa-0.85□□□□□ -2.55
COMMD3-209ENST00000471350 RPS3P23396 243 aaKnown RBP eCLIP-0.85□□□□□ -2.55
COMMD3-209ENST00000471350 OR2F1Q13607 317 aa-0.85□□□□□ -2.55
COMMD3-209ENST00000471350 FAM151BQ6UXP7 276 aa-0.85□□□□□ -2.55
COMMD3-209ENST00000471350 C12orf45Q8N5I9 185 aaPredicted RBP-0.85□□□□□ -2.55
COMMD3-209ENST00000471350 SLC25A40Q8TBP6 338 aa-0.85□□□□□ -2.55
COMMD3-209ENST00000471350 BORCS7Q96B45 105 aa-0.85□□□□□ -2.55
COMMD3-209ENST00000471350 HYLS1Q96M11 299 aa-0.85□□□□□ -2.55
COMMD3-209ENST00000471350 IMUPQ9GZP8 106 aa-0.85□□□□□ -2.55
COMMD3-209ENST00000471350 POPDC3Q9HBV1 291 aa-0.85□□□□□ -2.55
COMMD3-209ENST00000471350 NCOA1Q15788 1441 aa-0.86□□□□□ -2.55
COMMD3-209ENST00000471350 MIA2Q96PC5 1412 aa-0.86□□□□□ -2.55
COMMD3-209ENST00000471350 SRIP30626 198 aa-0.86□□□□□ -2.55
COMMD3-209ENST00000471350 UBE2BP63146 152 aa-0.86□□□□□ -2.55
COMMD3-209ENST00000471350 TMED1Q13445 227 aa-0.86□□□□□ -2.55
COMMD3-209ENST00000471350 ZNF56Q15929 161 aa-0.86□□□□□ -2.55
COMMD3-209ENST00000471350 GRPEL2Q8TAA5 225 aa-0.86□□□□□ -2.55
COMMD3-209ENST00000471350 STAG3L4Q8TBR4 150 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms