RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.16□□□□□ -0.3
LMNA-211ENST00000470199 LINC00305Q7Z4B0 112 aa13.16□□□□□ -0.3
LMNA-211ENST00000470199 NPCDR1Q9BY65 106 aa13.16□□□□□ -0.3
LMNA-211ENST00000470199 ZMAT4Q9H898 229 aa13.16□□□□□ -0.3
LMNA-211ENST00000470199 SLC39A9Q9NUM3 307 aa13.16□□□□□ -0.3
LMNA-211ENST00000470199 RFNGQ9Y644 331 aa13.16□□□□□ -0.3
LMNA-211ENST00000470199 PXMP4Q9Y6I8 212 aa13.16□□□□□ -0.3
LMNA-211ENST00000470199 TRAV5A0A0B4J249 113 aa13.15□□□□□ -0.3
LMNA-211ENST00000470199 G3V3Q6 166 aa13.15□□□□□ -0.3
LMNA-211ENST00000470199 SNRPCP09234 159 aaKnown RBP13.15□□□□□ -0.3
LMNA-211ENST00000470199 B2MP61769 119 aa13.15□□□□□ -0.3
LMNA-211ENST00000470199 IGFL4Q6B9Z1 124 aa13.15□□□□□ -0.3
LMNA-211ENST00000470199 ATP5SQ99766 215 aa13.15□□□□□ -0.3
LMNA-211ENST00000470199 WDR61Q9GZS3 305 aaKnown RBP13.15□□□□□ -0.3
LMNA-211ENST00000470199 MRPS12O15235 138 aaKnown RBP13.14□□□□□ -0.31
LMNA-211ENST00000470199 GALR1P47211 349 aa13.14□□□□□ -0.31
LMNA-211ENST00000470199 PXDC1Q5TGL8 231 aa13.14□□□□□ -0.31
LMNA-211ENST00000470199 C10orf113Q5VZT2 155 aa13.14□□□□□ -0.31
LMNA-211ENST00000470199 C20orf173Q96LM9 149 aa13.14□□□□□ -0.31
LMNA-211ENST00000470199 SPATA25Q9BR10 227 aa13.14□□□□□ -0.31
LMNA-211ENST00000470199 DNAJC4Q9NNZ3 241 aa13.14□□□□□ -0.31
LMNA-211ENST00000470199 TENM3Q9P273 2699 aa13.14□□□□□ -0.31
LMNA-211ENST00000470199 SMLR1H3BR10 107 aa13.13□□□□□ -0.31
LMNA-211ENST00000470199 ACTL10Q5JWF8 245 aa13.13□□□□□ -0.31
LMNA-211ENST00000470199 Q6ZRG5 221 aa13.13□□□□□ -0.31
LMNA-211ENST00000470199 LINC00052Q96N35 136 aa13.13□□□□□ -0.31
LMNA-211ENST00000470199 NBEAL2Q6ZNJ1 2754 aa13.12□□□□□ -0.31
LMNA-211ENST00000470199 TRAV8-2A0A0B4J237 113 aa13.12□□□□□ -0.31
LMNA-211ENST00000470199 MPDU1O75352 247 aa13.12□□□□□ -0.31
LMNA-211ENST00000470199 PRB4P10163 310 aaPredicted RBP13.12□□□□□ -0.31
LMNA-211ENST00000470199 FGL1Q08830 312 aa13.12□□□□□ -0.31
LMNA-211ENST00000470199 GDF5OSQ5U4N7 250 aa13.12□□□□□ -0.31
LMNA-211ENST00000470199 OR2T35Q8NGX2 323 aa13.12□□□□□ -0.31
LMNA-211ENST00000470199 ELOA3CA0A087WX78 387 aaPredicted RBP13.11□□□□□ -0.31
LMNA-211ENST00000470199 H3BTX0 84 aa13.11□□□□□ -0.31
LMNA-211ENST00000470199 HLA-DMBP28068 263 aa13.11□□□□□ -0.31
LMNA-211ENST00000470199 APOC4P55056 127 aa13.11□□□□□ -0.31
LMNA-211ENST00000470199 SNRPD3P62318 126 aaKnown RBP13.11□□□□□ -0.31
LMNA-211ENST00000470199 SPATA31B1PQ5VZV4 182 aa13.11□□□□□ -0.31
LMNA-211ENST00000470199 TRPT1Q86TN4 253 aaKnown RBP13.11□□□□□ -0.31
LMNA-211ENST00000470199 STHQ8IWL8 128 aa13.11□□□□□ -0.31
LMNA-211ENST00000470199 C16orf92Q96LL3 132 aa13.11□□□□□ -0.31
LMNA-211ENST00000470199 GPR82Q96P67 336 aa13.11□□□□□ -0.31
LMNA-211ENST00000470199 OVOL2Q9BRP0 275 aa13.11□□□□□ -0.31
LMNA-211ENST00000470199 SEPSECSQ9HD40 501 aaKnown RBP13.11□□□□□ -0.31
LMNA-211ENST00000470199 FXYD6-FXYD2A0A087WZ82 144 aa13.1□□□□□ -0.31
LMNA-211ENST00000470199 F6UB75 175 aa13.1□□□□□ -0.31
LMNA-211ENST00000470199 RPL7P18124 248 aaKnown RBP13.1□□□□□ -0.31
LMNA-211ENST00000470199 ATF4P18848 351 aaPredicted RBP13.1□□□□□ -0.31
LMNA-211ENST00000470199 S100A7P31151 101 aa13.1□□□□□ -0.31
LMNA-211ENST00000470199 PSMB3P49720 205 aa13.1□□□□□ -0.31
LMNA-211ENST00000470199 DEFB135Q30KP9 77 aa13.1□□□□□ -0.31
LMNA-211ENST00000470199 RNF182Q8N6D2 247 aa13.1□□□□□ -0.31
LMNA-211ENST00000470199 OR1L4Q8NGR5 311 aa13.1□□□□□ -0.31
LMNA-211ENST00000470199 ASB13Q8WXK3 278 aa13.1□□□□□ -0.31
LMNA-211ENST00000470199 AQP10Q96PS8 301 aa13.1□□□□□ -0.31
LMNA-211ENST00000470199 CSTL1Q9H114 145 aa13.1□□□□□ -0.31
LMNA-211ENST00000470199 KIR2DL5BA0A0G2JN68 375 aa13.09□□□□□ -0.31
LMNA-211ENST00000470199 KIR2DL5BA0A0G2JPC4 375 aa13.09□□□□□ -0.31
LMNA-211ENST00000470199 RNF222A6NCQ9 220 aa13.09□□□□□ -0.31
LMNA-211ENST00000470199 ISLRO14498 428 aa13.09□□□□□ -0.31
LMNA-211ENST00000470199 GIG44P09565 113 aaPredicted RBP13.09□□□□□ -0.31
LMNA-211ENST00000470199 ID1P41134 155 aa13.09□□□□□ -0.31
LMNA-211ENST00000470199 KIR2DL5AQ8N109 375 aa13.09□□□□□ -0.31
LMNA-211ENST00000470199 KIR2DL5BQ8NHK3 375 aa13.09□□□□□ -0.31
LMNA-211ENST00000470199 AGRNO00468 2067 aa13.08□□□□□ -0.32
LMNA-211ENST00000470199 A0A087X0K7 114 aa13.08□□□□□ -0.32
LMNA-211ENST00000470199 H3BMM0 161 aa13.08□□□□□ -0.32
LMNA-211ENST00000470199 H3BQ15 152 aa13.08□□□□□ -0.32
LMNA-211ENST00000470199 IFNA5P01569 189 aa13.08□□□□□ -0.32
LMNA-211ENST00000470199 C4BPBP20851 252 aa13.08□□□□□ -0.32
LMNA-211ENST00000470199 MEOX2P50222 304 aa13.08□□□□□ -0.32
LMNA-211ENST00000470199 ZNF709Q8N972 641 aa13.08□□□□□ -0.32
LMNA-211ENST00000470199 PFDN5Q99471 154 aa13.08□□□□□ -0.32
LMNA-211ENST00000470199 TNFSF18Q9UNG2 199 aa13.08□□□□□ -0.32
LMNA-211ENST00000470199 CA1P00915 261 aaPredicted RBP13.07□□□□□ -0.32
LMNA-211ENST00000470199 IGKV3-20P01619 116 aa13.07□□□□□ -0.32
LMNA-211ENST00000470199 MIR17HGQ75NE6 70 aa13.07□□□□□ -0.32
LMNA-211ENST00000470199 S100A7AQ86SG5 101 aa13.07□□□□□ -0.32
LMNA-211ENST00000470199 SCGB1C1Q8TD33 95 aa13.07□□□□□ -0.32
LMNA-211ENST00000470199 GATAD1Q8WUU5 269 aa13.07□□□□□ -0.32
LMNA-211ENST00000470199 WWC2-AS2Q96NR7 200 aa13.07□□□□□ -0.32
LMNA-211ENST00000470199 SLC17A3O00476 420 aa13.06□□□□□ -0.32
LMNA-211ENST00000470199 UBE2CO00762 179 aa13.06□□□□□ -0.32
LMNA-211ENST00000470199 SPRY2O43597 315 aa13.06□□□□□ -0.32
LMNA-211ENST00000470199 EIF3GO75821 320 aaKnown RBP eCLIP13.06□□□□□ -0.32
LMNA-211ENST00000470199 IGLC2P0DOY2 106 aa13.06□□□□□ -0.32
LMNA-211ENST00000470199 FFAR4Q5NUL3 377 aa13.06□□□□□ -0.32
LMNA-211ENST00000470199 FAM78BQ5VT40 261 aa13.06□□□□□ -0.32
LMNA-211ENST00000470199 Q6ZWC4 215 aa13.06□□□□□ -0.32
LMNA-211ENST00000470199 BPIFA4PQ86YQ2 179 aa13.06□□□□□ -0.32
LMNA-211ENST00000470199 RNF183Q96D59 192 aa13.06□□□□□ -0.32
LMNA-211ENST00000470199 PARD6GQ9BYG4 376 aaPredicted RBP13.06□□□□□ -0.32
LMNA-211ENST00000470199 SAV1Q9H4B6 383 aaPredicted RBP13.06□□□□□ -0.32
LMNA-211ENST00000470199 EDA2RQ9HAV5 297 aa13.06□□□□□ -0.32
LMNA-211ENST00000470199 C17orf112F2Z3M2 114 aa13.05□□□□□ -0.32
LMNA-211ENST00000470199 ZNF705DP0CH99 300 aaPredicted RBP13.05□□□□□ -0.32
LMNA-211ENST00000470199 ZNF705BP0CI00 300 aaPredicted RBP13.05□□□□□ -0.32
LMNA-211ENST00000470199 PYYP10082 97 aa13.05□□□□□ -0.32
LMNA-211ENST00000470199 HLA-DRB4P13762 266 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms