RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 TMEM208Q9BTX3 173 aa12.44□□□□□ -0.42
COL7A1-208ENST00000470076 A0A1B0GVY2 172 aa12.43□□□□□ -0.42
COL7A1-208ENST00000470076 H3BP45 60 aa12.43□□□□□ -0.42
COL7A1-208ENST00000470076 M0R2N4 97 aa12.43□□□□□ -0.42
COL7A1-208ENST00000470076 DUSP14O95147 198 aaKnown RBP12.43□□□□□ -0.42
COL7A1-208ENST00000470076 TMEM182Q6ZP80 229 aaPredicted RBP12.43□□□□□ -0.42
COL7A1-208ENST00000470076 TMEM144Q7Z5S9 345 aa12.43□□□□□ -0.42
COL7A1-208ENST00000470076 CCDC190Q86UF4 302 aa12.43□□□□□ -0.42
COL7A1-208ENST00000470076 PRSS29PA6NIE9 313 aa12.42□□□□□ -0.42
COL7A1-208ENST00000470076 HTN3P15516 51 aa12.42□□□□□ -0.42
COL7A1-208ENST00000470076 ID3Q02535 119 aa12.42□□□□□ -0.42
COL7A1-208ENST00000470076 PLA2G2EQ9NZK7 142 aa12.42□□□□□ -0.42
COL7A1-208ENST00000470076 C9orf170A2RU37 121 aa12.41□□□□□ -0.42
COL7A1-208ENST00000470076 H3BRN7 92 aa12.41□□□□□ -0.42
COL7A1-208ENST00000470076 RTL8CO15255 209 aa12.41□□□□□ -0.42
COL7A1-208ENST00000470076 IL5P05113 134 aa12.41□□□□□ -0.42
COL7A1-208ENST00000470076 CNN1P51911 297 aaKnown RBP12.41□□□□□ -0.42
COL7A1-208ENST00000470076 RAP2BP61225 183 aa12.41□□□□□ -0.42
COL7A1-208ENST00000470076 DAD1P61803 113 aa12.41□□□□□ -0.42
COL7A1-208ENST00000470076 RNF212Q495C1 297 aa12.41□□□□□ -0.42
COL7A1-208ENST00000470076 CYP2G1PQ6ZSU1 146 aa12.41□□□□□ -0.42
COL7A1-208ENST00000470076 SLC25A39Q9BZJ4 359 aaPredicted RBP12.41□□□□□ -0.42
COL7A1-208ENST00000470076 TRAV8-2A0A0B4J237 113 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 SMCO3A2RU48 225 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 CCDC160A6NGH7 325 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 ADAP1O75689 374 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 INSP01308 110 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 RPL7P18124 248 aaKnown RBP12.4□□□□□ -0.42
COL7A1-208ENST00000470076 B2MP61769 119 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 SELENOTP62341 195 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 POLR2GP62487 172 aaKnown RBP eCLIP12.4□□□□□ -0.42
COL7A1-208ENST00000470076 FGL1Q08830 312 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 SPANXN2Q5MJ10 180 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 OR11H7Q8NGC8 314 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 SHANK2-AS3Q9BTD1 123 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 PSENENQ9NZ42 101 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 HIGD1AQ9Y241 93 aa12.4□□□□□ -0.42
COL7A1-208ENST00000470076 NAP1L6A6NFF2 107 aa12.39□□□□□ -0.43
COL7A1-208ENST00000470076 HYPMO75409 117 aa12.39□□□□□ -0.43
COL7A1-208ENST00000470076 PLP1P60201 277 aa12.39□□□□□ -0.43
COL7A1-208ENST00000470076 SPINK13Q1W4C9 94 aa12.39□□□□□ -0.43
COL7A1-208ENST00000470076 S100A7AQ86SG5 101 aa12.39□□□□□ -0.43
COL7A1-208ENST00000470076 RNF182Q8N6D2 247 aa12.39□□□□□ -0.43
COL7A1-208ENST00000470076 LYRM9A8MSI8 78 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 M0R2Z0 102 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 CRXO43186 299 aaPredicted RBP12.38□□□□□ -0.43
COL7A1-208ENST00000470076 NDUFB6O95139 128 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 LINC00869P0C866 280 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 INPP1P49441 399 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 IGFL4Q6B9Z1 124 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 TMEM88Q6PEY1 159 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 Q6ZR54 194 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 ZNF738Q8NE65 137 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 SMIM8Q96KF7 97 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 SRRQ9GZT4 340 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 PKD1P98161 4303 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 PCLOQ9Y6V0 5065 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 NACAE9PAV3 2078 aa12.38□□□□□ -0.43
COL7A1-208ENST00000470076 IGLV2-18A0A075B6J9 118 aa12.37□□□□□ -0.43
COL7A1-208ENST00000470076 PMS2P5A8MQ11 134 aa12.37□□□□□ -0.43
COL7A1-208ENST00000470076 SSSCA1O60232 199 aa12.37□□□□□ -0.43
COL7A1-208ENST00000470076 OR5G3P0C626 314 aa12.37□□□□□ -0.43
COL7A1-208ENST00000470076 TSPOP30536 169 aa12.37□□□□□ -0.43
COL7A1-208ENST00000470076 DLK1P80370 383 aa12.37□□□□□ -0.43
COL7A1-208ENST00000470076 C15orf53Q8NAA6 179 aa12.37□□□□□ -0.43
COL7A1-208ENST00000470076 NPVFQ9HCQ7 196 aa12.37□□□□□ -0.43
COL7A1-208ENST00000470076 RNF24Q9Y225 148 aa12.37□□□□□ -0.43
COL7A1-208ENST00000470076 A0A087X0K7 114 aa12.36□□□□□ -0.43
COL7A1-208ENST00000470076 ZNF705GA8MUZ8 300 aaPredicted RBP12.36□□□□□ -0.43
COL7A1-208ENST00000470076 FNDC10F2Z333 226 aa12.36□□□□□ -0.43
COL7A1-208ENST00000470076 BOLA2-SMG1P6H3BVE0 249 aa12.36□□□□□ -0.43
COL7A1-208ENST00000470076 OR4E1P0C645 316 aa12.36□□□□□ -0.43
COL7A1-208ENST00000470076 MED14OSP0DP75 135 aa12.36□□□□□ -0.43
COL7A1-208ENST00000470076 SOHLH1Q5JUK2 328 aa12.36□□□□□ -0.43
COL7A1-208ENST00000470076 TRIQKQ629K1 86 aa12.36□□□□□ -0.43
COL7A1-208ENST00000470076 TMEM14EPQ6UXP3 125 aa12.36□□□□□ -0.43
COL7A1-208ENST00000470076 UHRF2Q96PU4 802 aa12.36□□□□□ -0.43
COL7A1-208ENST00000470076 K7EPK0 472 aa12.35□□□□□ -0.43
COL7A1-208ENST00000470076 CXCL3P19876 107 aa12.35□□□□□ -0.43
COL7A1-208ENST00000470076 FAM3BP58499 235 aaPredicted RBP12.35□□□□□ -0.43
COL7A1-208ENST00000470076 RRAS2P62070 204 aaPredicted RBP12.35□□□□□ -0.43
COL7A1-208ENST00000470076 BAP18Q8IXM2 172 aa12.35□□□□□ -0.43
COL7A1-208ENST00000470076 OR10P1Q8NGE3 313 aa12.35□□□□□ -0.43
COL7A1-208ENST00000470076 OR8A1Q8NGG7 326 aa12.35□□□□□ -0.43
COL7A1-208ENST00000470076 LRRC20Q8TCA0 184 aa12.35□□□□□ -0.43
COL7A1-208ENST00000470076 ARL6Q9H0F7 186 aa12.35□□□□□ -0.43
COL7A1-208ENST00000470076 MGAT4CQ9UBM8 478 aa12.35□□□□□ -0.43
COL7A1-208ENST00000470076 FLVCR2Q9UPI3 526 aa12.35□□□□□ -0.43
COL7A1-208ENST00000470076 DNAH11Q96DT5 4516 aa12.35□□□□□ -0.43
COL7A1-208ENST00000470076 ZNF701M0R085 212 aaPredicted RBP12.34□□□□□ -0.43
COL7A1-208ENST00000470076 CCNKO75909 580 aa12.34□□□□□ -0.43
COL7A1-208ENST00000470076 PRM2P04554 102 aa12.34□□□□□ -0.43
COL7A1-208ENST00000470076 METTL15P1P0C7V9 234 aa12.34□□□□□ -0.43
COL7A1-208ENST00000470076 TAS2R30P59541 319 aa12.34□□□□□ -0.43
COL7A1-208ENST00000470076 RHOBP62745 196 aa12.34□□□□□ -0.43
COL7A1-208ENST00000470076 HIST1H1AQ02539 215 aaPredicted RBP12.34□□□□□ -0.43
COL7A1-208ENST00000470076 PSG3Q16557 428 aa12.34□□□□□ -0.43
COL7A1-208ENST00000470076 BAK1Q16611 211 aa12.34□□□□□ -0.43
COL7A1-208ENST00000470076 C4orf46Q504U0 113 aa12.34□□□□□ -0.43
COL7A1-208ENST00000470076 TEPPQ6URK8 271 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms