RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 LRP1BQ9NZR2 4599 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 C7orf66A4D0T2 115 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 FAM24AA6NFZ4 105 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 ZNF705FA8MVS1 300 aaPredicted RBP6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 FAM25EA8MYX2 175 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 SIX6O95475 246 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 LINC00869P0C866 280 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 HLA-DRB4P13762 266 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 AZU1P20160 251 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 ATP5IP56385 69 aaPredicted RBP6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 SLC38A11Q08AI6 406 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 MZT2BQ6NZ67 158 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 AMTNQ6UX39 209 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 CYP2G1PQ6ZSU1 146 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 PPP1R14BQ96C90 147 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 SMIM8Q96KF7 97 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 C11orf68Q9H3H3 251 aaKnown RBP6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 SAV1Q9H4B6 383 aaPredicted RBP6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 STRAPQ9Y3F4 350 aaKnown RBP6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 HLA-DRB4X5D2U9 266 aa6.59□□□□□ -1.35
SHROOM3-203ENST00000469923 DNAH5Q8TE73 4624 aa6.59□□□□□ -1.36
SHROOM3-203ENST00000469923 A0A0J9YX75 114 aa6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 C5orf51A6NDU8 294 aa6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 NUPR2A6NF83 97 aa6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 ZNF705GA8MUZ8 300 aaPredicted RBP6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 MRPS12O15235 138 aaKnown RBP6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 CRXO43186 299 aaPredicted RBP6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 PTTG1O95997 202 aa6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 CD5P06127 495 aa6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 ATF4P18848 351 aaPredicted RBP6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 RPP30P78346 268 aaKnown RBP6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 FGL1Q08830 312 aa6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 OXA1LQ15070 435 aa6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 NRARPQ7Z6K4 114 aa6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 BPIFCQ8NFQ6 507 aa6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 NARS2Q96I59 477 aaKnown RBP6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 CIB3Q96Q77 187 aaPredicted RBP6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 SLC25A39Q9BZJ4 359 aaPredicted RBP6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 LSM5Q9Y4Y9 91 aaKnown RBP6.58□□□□□ -1.36
SHROOM3-203ENST00000469923 TRAV12-2A0A075B6T6 113 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 M0R2Z0 102 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 CST7O76096 145 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 IL5P05113 134 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 SPP1P10451 314 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 AP2S1P53680 142 aaPredicted RBP6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 AKR1C1Q04828 323 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 IL15RAQ13261 267 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 ZNF705AQ6ZN79 300 aaPredicted RBP6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 TMEM144Q7Z5S9 345 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 ENKURQ8TC29 256 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 TMEM37Q8WXS4 190 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 C16orf92Q96LL3 132 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 C2orf50Q96LR7 162 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 MGST2Q99735 147 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 SLC45A2Q9UMX9 530 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 KLK5Q9Y337 293 aaPredicted RBP6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 RFNGQ9Y644 331 aa6.57□□□□□ -1.36
SHROOM3-203ENST00000469923 A0A1B0GVG6 124 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 IGSF23A1L1A6 192 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 INMT-MINDY4F8WBC2 141 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 H3BQ15 152 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 H3BRN7 92 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 K7EPK0 472 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 SCGB2A1O75556 95 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 EIF3GO75821 320 aaKnown RBP eCLIP6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 OR5G3P0C626 314 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 MIFP14174 115 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 SNRPD3P62318 126 aaKnown RBP6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 GCSAMLQ5JQS6 135 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 C1orf194Q5T5A4 169 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 MORN3Q6PF18 240 aaPredicted RBP6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 Q6ZNX1 250 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 Q6ZQT7 251 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 C2CD4CQ8TF44 421 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 SHANK2-AS3Q9BTD1 123 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 ARL6Q9H0F7 186 aa6.56□□□□□ -1.36
SHROOM3-203ENST00000469923 HSPG2P98160 4391 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 hCG_2014768A0A024R1R8 64 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 IGHV4-4A0A075B6R2 117 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 H0YIZ8 118 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 M0R2N4 97 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 SLC17A3O00476 420 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 HYPMO75409 117 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 CNN1P51911 297 aaKnown RBP6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 PSG9Q00887 426 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 RAB32Q13637 225 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 SPINK13Q1W4C9 94 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 MIC13Q5XKP0 118 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 LGALS9CQ6DKI2 356 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 FOXI2Q6ZQN5 318 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 BAP18Q8IXM2 172 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 TMEM217Q8N7C4 229 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 OR11H7Q8NGC8 314 aa6.55□□□□□ -1.36
SHROOM3-203ENST00000469923 ABCA13Q86UQ4 5058 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 DEFB131BA0A096LNP1 70 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 A8MTW9 85 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 L7N2F9 121 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 ISLRO14498 428 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 AGPAT2O15120 278 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 HTN3P15516 51 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms