RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 IGKV1D-37A0A075B6S9 117 aa13.59□□□□□ -0.23
MRPL28-208ENST00000469744 IGLV1-40P01703 118 aa13.59□□□□□ -0.23
MRPL28-208ENST00000469744 C8orf88P0DMB2 117 aa13.59□□□□□ -0.23
MRPL28-208ENST00000469744 ATP5G3P48201 142 aa13.59□□□□□ -0.23
MRPL28-208ENST00000469744 ZNF674Q2M3X9 581 aa13.59□□□□□ -0.23
MRPL28-208ENST00000469744 TMEM116Q8NCL8 245 aa13.59□□□□□ -0.23
MRPL28-208ENST00000469744 MYOZ3Q8TDC0 251 aa13.59□□□□□ -0.23
MRPL28-208ENST00000469744 SRSF12Q8WXF0 261 aaKnown RBP13.59□□□□□ -0.23
MRPL28-208ENST00000469744 NPIPB3Q92617 1050 aa13.59□□□□□ -0.23
MRPL28-208ENST00000469744 DNAJC4Q9NNZ3 241 aa13.59□□□□□ -0.23
MRPL28-208ENST00000469744 EGR2P11161 476 aaPredicted RBP13.58□□□□□ -0.24
MRPL28-208ENST00000469744 UBE2G2P60604 165 aa13.58□□□□□ -0.24
MRPL28-208ENST00000469744 SSBP2P81877 361 aaPredicted RBP13.58□□□□□ -0.24
MRPL28-208ENST00000469744 EGFEM1PQ0D2K5 195 aa13.58□□□□□ -0.24
MRPL28-208ENST00000469744 KIAA0141Q14154 515 aaPredicted RBP13.58□□□□□ -0.24
MRPL28-208ENST00000469744 ADIRFQ15847 76 aa13.58□□□□□ -0.24
MRPL28-208ENST00000469744 DPF1Q92782 380 aa13.58□□□□□ -0.24
MRPL28-208ENST00000469744 UHRF2Q96PU4 802 aa13.58□□□□□ -0.24
MRPL28-208ENST00000469744 MFAP2P55001 183 aa13.57□□□□□ -0.24
MRPL28-208ENST00000469744 C19orf54Q5BKX5 351 aa13.57□□□□□ -0.24
MRPL28-208ENST00000469744 ZNF491Q8N8L2 437 aa13.57□□□□□ -0.24
MRPL28-208ENST00000469744 OR11H1Q8NG94 326 aa13.57□□□□□ -0.24
MRPL28-208ENST00000469744 Q8WTZ3 238 aa13.57□□□□□ -0.24
MRPL28-208ENST00000469744 MCRIP2Q9BUT9 160 aaKnown RBP13.57□□□□□ -0.24
MRPL28-208ENST00000469744 GPR61Q9BZJ8 451 aa13.57□□□□□ -0.24
MRPL28-208ENST00000469744 COL7A1Q02388 2944 aa13.56□□□□□ -0.24
MRPL28-208ENST00000469744 TRBV24-1A0A075B6N3 115 aa13.56□□□□□ -0.24
MRPL28-208ENST00000469744 ELOA3CA0A087WX78 387 aaPredicted RBP13.56□□□□□ -0.24
MRPL28-208ENST00000469744 REG1AP05451 166 aa13.56□□□□□ -0.24
MRPL28-208ENST00000469744 RAB9AP51151 201 aa13.56□□□□□ -0.24
MRPL28-208ENST00000469744 TMEM37Q8WXS4 190 aa13.56□□□□□ -0.24
MRPL28-208ENST00000469744 YTHDF2Q9Y5A9 579 aaKnown RBP13.56□□□□□ -0.24
MRPL28-208ENST00000469744 LY96Q9Y6Y9 160 aa13.56□□□□□ -0.24
MRPL28-208ENST00000469744 A0A1W2PRE2 83 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 COX7A2P2O60397 106 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 NDUFB4O95168 129 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 GATA2P23769 480 aaPredicted RBP13.55□□□□□ -0.24
MRPL28-208ENST00000469744 CRIP2P52943 208 aaPredicted RBP13.55□□□□□ -0.24
MRPL28-208ENST00000469744 FHL3Q13643 280 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 ZNF503Q96F45 646 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 MISP3Q96FF7 219 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 UBE2E2Q96LR5 201 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 PPP1R2P9O14990 202 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 PLP1P60201 277 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 DEFB121Q5J5C9 76 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 ASPHD1Q5U4P2 390 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 C10orf113Q5VZT2 155 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 UNQ5815/PRO19632Q6UWF5 114 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 FAM167A-AS1Q96KT0 104 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 PYGO2Q9BRQ0 406 aa13.55□□□□□ -0.24
MRPL28-208ENST00000469744 MRPL36Q9P0J6 103 aaKnown RBP13.55□□□□□ -0.24
MRPL28-208ENST00000469744 C9JCJ5 164 aa13.54□□□□□ -0.24
MRPL28-208ENST00000469744 H7BYZ3 331 aa13.54□□□□□ -0.24
MRPL28-208ENST00000469744 CNIH1O95406 144 aa13.54□□□□□ -0.24
MRPL28-208ENST00000469744 CXCL1P09341 107 aa13.54□□□□□ -0.24
MRPL28-208ENST00000469744 ZNF562Q6V9R5 426 aa13.54□□□□□ -0.24
MRPL28-208ENST00000469744 LINC01551Q86U37 167 aa13.54□□□□□ -0.24
MRPL28-208ENST00000469744 STXBP6Q8NFX7 210 aa13.54□□□□□ -0.24
MRPL28-208ENST00000469744 OR51G1Q8NGK1 321 aa13.54□□□□□ -0.24
MRPL28-208ENST00000469744 OR1N2Q8NGR9 330 aa13.54□□□□□ -0.24
MRPL28-208ENST00000469744 OR4X1Q8NH49 305 aa13.54□□□□□ -0.24
MRPL28-208ENST00000469744 ARPC1AQ92747 370 aa13.54□□□□□ -0.24
MRPL28-208ENST00000469744 MS4A10Q96PG2 267 aa13.54□□□□□ -0.24
MRPL28-208ENST00000469744 PFN1P07737 140 aaKnown RBP13.53□□□□□ -0.24
MRPL28-208ENST00000469744 S100PP25815 95 aa13.53□□□□□ -0.24
MRPL28-208ENST00000469744 FXYD3Q14802 87 aa13.53□□□□□ -0.24
MRPL28-208ENST00000469744 SMUG1Q53HV7 270 aa13.53□□□□□ -0.24
MRPL28-208ENST00000469744 ZNF343Q6P1L6 599 aa13.53□□□□□ -0.24
MRPL28-208ENST00000469744 IMMP2LQ96T52 175 aa13.53□□□□□ -0.24
MRPL28-208ENST00000469744 SLC25A2Q9BXI2 301 aa13.53□□□□□ -0.24
MRPL28-208ENST00000469744 SCO2A0A1W2PP80 73 aa13.52□□□□□ -0.25
MRPL28-208ENST00000469744 I3L2K1 104 aa13.52□□□□□ -0.25
MRPL28-208ENST00000469744 OR7C2O60412 319 aa13.52□□□□□ -0.25
MRPL28-208ENST00000469744 IGHV3-11P01762 117 aa13.52□□□□□ -0.25
MRPL28-208ENST00000469744 RPS10P46783 165 aaKnown RBP13.52□□□□□ -0.25
MRPL28-208ENST00000469744 ZNF90Q03938 601 aa13.52□□□□□ -0.25
MRPL28-208ENST00000469744 PATE2Q6UY27 113 aa13.52□□□□□ -0.25
MRPL28-208ENST00000469744 BTF3L4Q96K17 158 aa13.52□□□□□ -0.25
MRPL28-208ENST00000469744 FAM210BQ96KR6 192 aa13.52□□□□□ -0.25
MRPL28-208ENST00000469744 SAV1Q9H4B6 383 aaPredicted RBP13.52□□□□□ -0.25
MRPL28-208ENST00000469744 TGIF2-C20orf24A0A0A6YYL0 155 aa13.51□□□□□ -0.25
MRPL28-208ENST00000469744 NPIPB5A8MRT5 1133 aa13.51□□□□□ -0.25
MRPL28-208ENST00000469744 FABP1P07148 127 aa13.51□□□□□ -0.25
MRPL28-208ENST00000469744 C9orf66Q5T8R8 295 aa13.51□□□□□ -0.25
MRPL28-208ENST00000469744 ZFP82Q8N141 532 aa13.51□□□□□ -0.25
MRPL28-208ENST00000469744 TCEAL7Q9BRU2 100 aa13.51□□□□□ -0.25
MRPL28-208ENST00000469744 DMRT1Q9Y5R6 373 aa13.51□□□□□ -0.25
MRPL28-208ENST00000469744 C5orf52A6NGY3 159 aa13.5□□□□□ -0.25
MRPL28-208ENST00000469744 S100A6P06703 90 aa13.5□□□□□ -0.25
MRPL28-208ENST00000469744 GALR1P47211 349 aa13.5□□□□□ -0.25
MRPL28-208ENST00000469744 SLURP1P55000 103 aa13.5□□□□□ -0.25
MRPL28-208ENST00000469744 TPPP2P59282 170 aa13.5□□□□□ -0.25
MRPL28-208ENST00000469744 TMEM190Q8WZ59 177 aa13.5□□□□□ -0.25
MRPL28-208ENST00000469744 ZNF355PQ9NSJ1 428 aa13.5□□□□□ -0.25
MRPL28-208ENST00000469744 URGCP-MRPS24S4R325 110 aa13.5□□□□□ -0.25
MRPL28-208ENST00000469744 IGHV4OR15-8A0A075B7B6 117 aa13.49□□□□□ -0.25
MRPL28-208ENST00000469744 A0A087WW49 117 aa13.49□□□□□ -0.25
MRPL28-208ENST00000469744 HYPMO75409 117 aa13.49□□□□□ -0.25
MRPL28-208ENST00000469744 APELAP0DMC3 54 aa13.49□□□□□ -0.25
MRPL28-208ENST00000469744 OR5T1Q8NG75 326 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms