RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 RBKSQ9H477 322 aa12.56□□□□□ -0.4
TTC28-205ENST00000469670 Q9H521 79 aa12.56□□□□□ -0.4
TTC28-205ENST00000469670 HSPB7Q9UBY9 170 aa12.56□□□□□ -0.4
TTC28-205ENST00000469670 MTFP1Q9UDX5 166 aa12.56□□□□□ -0.4
TTC28-205ENST00000469670 TMEM56-RWDD3S4R434 201 aa12.56□□□□□ -0.4
TTC28-205ENST00000469670 RAB3DO95716 219 aa12.55□□□□□ -0.4
TTC28-205ENST00000469670 ATP5IP56385 69 aaPredicted RBP12.55□□□□□ -0.4
TTC28-205ENST00000469670 ZNF493Q6ZR52 646 aa12.55□□□□□ -0.4
TTC28-205ENST00000469670 OR4D5Q8NGN0 318 aa12.55□□□□□ -0.4
TTC28-205ENST00000469670 OR1B1Q8NGR6 318 aa12.55□□□□□ -0.4
TTC28-205ENST00000469670 RNASE8Q8TDE3 154 aaKnown RBP12.55□□□□□ -0.4
TTC28-205ENST00000469670 MDFICQ9P1T7 246 aa12.55□□□□□ -0.4
TTC28-205ENST00000469670 SLC45A2Q9UMX9 530 aa12.55□□□□□ -0.4
TTC28-205ENST00000469670 IGKV1OR2-108A0A075B7D4 117 aa12.54□□□□□ -0.4
TTC28-205ENST00000469670 CFDP00746 253 aaPredicted RBP12.54□□□□□ -0.4
TTC28-205ENST00000469670 SMR3BP02814 79 aaPredicted RBP12.54□□□□□ -0.4
TTC28-205ENST00000469670 HOXA5P20719 270 aa12.54□□□□□ -0.4
TTC28-205ENST00000469670 KRTAP10-1P60331 282 aa12.54□□□□□ -0.4
TTC28-205ENST00000469670 ERVFC1-1P60608 527 aa12.54□□□□□ -0.4
TTC28-205ENST00000469670 RHOBP62745 196 aa12.54□□□□□ -0.4
TTC28-205ENST00000469670 TMEM229BQ8NBD8 167 aa12.54□□□□□ -0.4
TTC28-205ENST00000469670 ZNF738Q8NE65 137 aa12.54□□□□□ -0.4
TTC28-205ENST00000469670 TMEM263Q8WUH6 116 aaKnown RBP12.54□□□□□ -0.4
TTC28-205ENST00000469670 YIPF6Q96EC8 236 aa12.54□□□□□ -0.4
TTC28-205ENST00000469670 PPP1R14DQ9NXH3 145 aa12.54□□□□□ -0.4
TTC28-205ENST00000469670 SRRM2Q9UQ35 2752 aaKnown RBP12.53□□□□□ -0.4
TTC28-205ENST00000469670 CRYM-AS1A6NIL9 109 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 FAM25AB3EWG3 89 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 FAM25CB3EWG5 89 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 FAM25GB3EWG6 89 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 H3BNG1 76 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 ADAP1O75689 374 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 TAS2R19P59542 299 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 HIST1H1AQ02539 215 aaPredicted RBP12.53□□□□□ -0.4
TTC28-205ENST00000469670 FGL1Q08830 312 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 GPR107Q5VW38 600 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 GGNBP1Q5YKI7 109 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 STEAP1BQ6NZ63 245 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 LINC00612Q8N6U2 182 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 THAP8Q8NA92 274 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 GPR82Q96P67 336 aa12.53□□□□□ -0.4
TTC28-205ENST00000469670 IFNA5P01569 189 aa12.52□□□□□ -0.41
TTC28-205ENST00000469670 CCR6P51684 374 aa12.52□□□□□ -0.41
TTC28-205ENST00000469670 SMCO1Q147U7 214 aa12.52□□□□□ -0.41
TTC28-205ENST00000469670 OR8A1Q8NGG7 326 aa12.52□□□□□ -0.41
TTC28-205ENST00000469670 IL22RA2Q969J5 263 aa12.52□□□□□ -0.41
TTC28-205ENST00000469670 GAGE12BA1L429 117 aa12.51□□□□□ -0.41
TTC28-205ENST00000469670 J3QL48 77 aa12.51□□□□□ -0.41
TTC28-205ENST00000469670 GAGE7O76087 117 aa12.51□□□□□ -0.41
TTC28-205ENST00000469670 GAGE12FP0CL80 117 aa12.51□□□□□ -0.41
TTC28-205ENST00000469670 GAGE12GP0CL81 117 aa12.51□□□□□ -0.41
TTC28-205ENST00000469670 GAGE12IP0CL82 117 aa12.51□□□□□ -0.41
TTC28-205ENST00000469670 ORM2P19652 201 aa12.51□□□□□ -0.41
TTC28-205ENST00000469670 ICAM4Q14773 271 aa12.51□□□□□ -0.41
TTC28-205ENST00000469670 SURF2Q15527 256 aaPredicted RBP12.51□□□□□ -0.41
TTC28-205ENST00000469670 FAAP20Q6NZ36 180 aa12.51□□□□□ -0.41
TTC28-205ENST00000469670 PRR13Q9NZ81 148 aa12.51□□□□□ -0.41
TTC28-205ENST00000469670 FAM229AH3BQW9 127 aa12.5□□□□□ -0.41
TTC28-205ENST00000469670 TMEM147Q9BVK8 224 aa12.5□□□□□ -0.41
TTC28-205ENST00000469670 GPR132Q9UNW8 380 aa12.5□□□□□ -0.41
TTC28-205ENST00000469670 H7BYZ3 331 aa12.49□□□□□ -0.41
TTC28-205ENST00000469670 SIVA1O15304 175 aa12.49□□□□□ -0.41
TTC28-205ENST00000469670 RLN2P04090 185 aa12.49□□□□□ -0.41
TTC28-205ENST00000469670 GATA2P23769 480 aaPredicted RBP12.49□□□□□ -0.41
TTC28-205ENST00000469670 S100A7P31151 101 aa12.49□□□□□ -0.41
TTC28-205ENST00000469670 CDKN1BP46527 198 aa12.49□□□□□ -0.41
TTC28-205ENST00000469670 NCS1P62166 190 aa12.49□□□□□ -0.41
TTC28-205ENST00000469670 RAB11AP62491 216 aa12.49□□□□□ -0.41
TTC28-205ENST00000469670 BPIFCQ8NFQ6 507 aa12.49□□□□□ -0.41
TTC28-205ENST00000469670 EXTL2Q9UBQ6 330 aa12.49□□□□□ -0.41
TTC28-205ENST00000469670 A0A096LPF7 62 aa12.48□□□□□ -0.41
TTC28-205ENST00000469670 DNAH10OSP0CZ25 163 aa12.48□□□□□ -0.41
TTC28-205ENST00000469670 PRB4P10163 310 aaPredicted RBP12.48□□□□□ -0.41
TTC28-205ENST00000469670 TMEM182Q6ZP80 229 aaPredicted RBP12.48□□□□□ -0.41
TTC28-205ENST00000469670 LYZL2Q7Z4W2 148 aa12.48□□□□□ -0.41
TTC28-205ENST00000469670 CCDC28AQ8IWP9 274 aa12.48□□□□□ -0.41
TTC28-205ENST00000469670 PAIP2BQ9ULR5 123 aaKnown RBP12.48□□□□□ -0.41
TTC28-205ENST00000469670 KCNIP3Q9Y2W7 256 aa12.48□□□□□ -0.41
TTC28-205ENST00000469670 TNFRSF18Q9Y5U5 241 aa12.48□□□□□ -0.41
TTC28-205ENST00000469670 A0A087WTM6 91 aa12.47□□□□□ -0.41
TTC28-205ENST00000469670 A0A0B4J2A0 478 aa12.47□□□□□ -0.41
TTC28-205ENST00000469670 DISC1C4P0D8 188 aa12.47□□□□□ -0.41
TTC28-205ENST00000469670 CXCL3P19876 107 aa12.47□□□□□ -0.41
TTC28-205ENST00000469670 MZT2AQ6P582 158 aa12.47□□□□□ -0.41
TTC28-205ENST00000469670 Q6ZSN1 163 aa12.47□□□□□ -0.41
TTC28-205ENST00000469670 OR1S1Q8NH92 325 aa12.47□□□□□ -0.41
TTC28-205ENST00000469670 VSIG2Q96IQ7 327 aa12.47□□□□□ -0.41
TTC28-205ENST00000469670 TMPRSS5Q9H3S3 457 aa12.47□□□□□ -0.41
TTC28-205ENST00000469670 SHPKQ9UHJ6 478 aa12.47□□□□□ -0.41
TTC28-205ENST00000469670 H3BRN7 92 aa12.46□□□□□ -0.41
TTC28-205ENST00000469670 AKR1C4P17516 323 aa12.46□□□□□ -0.41
TTC28-205ENST00000469670 VBP1P61758 197 aa12.46□□□□□ -0.41
TTC28-205ENST00000469670 PSG3Q16557 428 aa12.46□□□□□ -0.41
TTC28-205ENST00000469670 C15orf40Q8WUR7 153 aa12.46□□□□□ -0.41
TTC28-205ENST00000469670 C20orf144Q9BQM9 153 aa12.46□□□□□ -0.41
TTC28-205ENST00000469670 SNURFLB1AK76 121 aa12.45□□□□□ -0.42
TTC28-205ENST00000469670 IAPPP10997 89 aa12.45□□□□□ -0.42
TTC28-205ENST00000469670 RPL7P18124 248 aaKnown RBP12.45□□□□□ -0.42
TTC28-205ENST00000469670 HAMPP81172 84 aa12.45□□□□□ -0.42
TTC28-205ENST00000469670 KIR3DS1Q14943 382 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms