RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 GUK1Q16774 197 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 ZNF506Q5JVG8 444 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 UNQ9165/PRO28630Q6UXU0 137 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 C12orf54Q6X4T0 127 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 NDUFA11Q86Y39 141 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 C1QL4Q86Z23 238 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 FXYD5Q96DB9 178 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 PAXXQ9BUH6 204 aa9.74□□□□□ -0.85
TRAF4-208ENST00000469529 IGHV3-35A0A0C4DH35 117 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 ADARB2-AS1A8MUL3 147 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 NBEAP1P0C6P0 100 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 IGLC2P0DOY2 106 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 BCL2P10415 239 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 HOXD3P31249 432 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-208ENST00000469529 MEOX2P50222 304 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 FGF8P55075 233 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-208ENST00000469529 PDE6HQ13956 83 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 PEA15Q15121 130 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 C16orf54Q6UWD8 224 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 COMMD7Q86VX2 200 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 LYPD1Q8N2G4 141 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 OR11H1Q8NG94 326 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 DPF1Q92782 380 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 OR5B12Q96R08 314 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 TMPRSS5Q9H3S3 457 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 SMPXQ9UHP9 88 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 VAX2Q9UIW0 290 aa9.73□□□□□ -0.85
TRAF4-208ENST00000469529 A0A087X0K7 114 aa9.72□□□□□ -0.85
TRAF4-208ENST00000469529 IGHV7-4-1A0A0J9YVY3 117 aa9.72□□□□□ -0.85
TRAF4-208ENST00000469529 LOC102723971A0A1B0GUV8 181 aa9.72□□□□□ -0.85
TRAF4-208ENST00000469529 HMGB3O15347 200 aaKnown RBP9.72□□□□□ -0.85
TRAF4-208ENST00000469529 OR7C2O60412 319 aa9.72□□□□□ -0.85
TRAF4-208ENST00000469529 ZNF253O75346 499 aa9.72□□□□□ -0.85
TRAF4-208ENST00000469529 MYCNOSP40205 109 aa9.72□□□□□ -0.85
TRAF4-208ENST00000469529 KRTAP10-3P60369 221 aa9.72□□□□□ -0.85
TRAF4-208ENST00000469529 C18orf65Q6ZTR6 163 aa9.72□□□□□ -0.85
TRAF4-208ENST00000469529 SLC7A5P1Q8MH63 180 aa9.72□□□□□ -0.85
TRAF4-208ENST00000469529 ARL6IP6Q8N6S5 226 aa9.72□□□□□ -0.85
TRAF4-208ENST00000469529 KLHL30-AS1Q8NEE0 82 aa9.72□□□□□ -0.85
TRAF4-208ENST00000469529 NARS2Q96I59 477 aaKnown RBP9.72□□□□□ -0.85
TRAF4-208ENST00000469529 TCEAL7Q9BRU2 100 aa9.72□□□□□ -0.85
TRAF4-208ENST00000469529 FBN3Q75N90 2809 aa9.71□□□□□ -0.85
TRAF4-208ENST00000469529 ZNF320A2RRD8 509 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 CCL24O00175 119 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 BMI1P35226 326 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 AWAT1Q58HT5 328 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 CCDC28AQ8IWP9 274 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 OR8I2Q8N0Y5 310 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 GRAMD2BQ96HH9 432 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 RAX2Q96IS3 184 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 CITED1Q99966 193 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 C20orf24Q9BUV8 137 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 TMEM231Q9H6L2 316 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 SIGLEC8Q9NYZ4 499 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 GNG13Q9P2W3 67 aa9.71□□□□□ -0.86
TRAF4-208ENST00000469529 TRBV19A0A075B6N1 114 aa9.7□□□□□ -0.86
TRAF4-208ENST00000469529 TMEM213A2RRL7 107 aa9.7□□□□□ -0.86
TRAF4-208ENST00000469529 FAM74A7A6NL05 159 aa9.7□□□□□ -0.86
TRAF4-208ENST00000469529 CHEK1O14757 476 aa9.7□□□□□ -0.86
TRAF4-208ENST00000469529 EIF3GO75821 320 aaKnown RBP eCLIP9.7□□□□□ -0.86
TRAF4-208ENST00000469529 MEF2BQ02080 365 aaPredicted RBP9.7□□□□□ -0.86
TRAF4-208ENST00000469529 ICAM4Q14773 271 aa9.7□□□□□ -0.86
TRAF4-208ENST00000469529 TM4SF20Q53R12 229 aa9.7□□□□□ -0.86
TRAF4-208ENST00000469529 OR4F17Q8NGA8 305 aa9.7□□□□□ -0.86
TRAF4-208ENST00000469529 GLMPQ8WWB7 406 aa9.7□□□□□ -0.86
TRAF4-208ENST00000469529 OR4F4Q96R69 305 aa9.7□□□□□ -0.86
TRAF4-208ENST00000469529 ELOVL1Q9BW60 279 aa9.7□□□□□ -0.86
TRAF4-208ENST00000469529 EIF5A2Q9GZV4 153 aaKnown RBP9.7□□□□□ -0.86
TRAF4-208ENST00000469529 CLEC5AQ9NY25 188 aa9.7□□□□□ -0.86
TRAF4-208ENST00000469529 SMAD5-AS1Q9Y6J3 95 aa9.7□□□□□ -0.86
TRAF4-208ENST00000469529 TMEM250H0YL14 139 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 H3BQ15 152 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 PAGE4O60829 102 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 APOHP02749 345 aaPredicted RBP9.69□□□□□ -0.86
TRAF4-208ENST00000469529 OR10J4P0C629 311 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 PYYP10082 97 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 GALR1P47211 349 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 SYNJ2BPP57105 145 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 UBE2L3P68036 154 aaKnown RBP9.69□□□□□ -0.86
TRAF4-208ENST00000469529 LEMD1Q68G75 181 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 C8orf86Q6ZUL3 223 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 C17orf77Q96MU5 243 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 RARRES2Q99969 163 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 RHPN1-AS1Q9BWJ2 59 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 SLC35B3Q9H1N7 401 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 ZNF586Q9NXT0 402 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 PEMTQ9UBM1 199 aa9.69□□□□□ -0.86
TRAF4-208ENST00000469529 A0A1B0GV50 99 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 TMEM218A2RU14 115 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 HELTA6NFD8 242 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 C2orf70A6NJV1 201 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 PDE6DO43924 150 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 NDUFB4O95168 129 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 SRP19P09132 144 aaKnown RBP9.68□□□□□ -0.86
TRAF4-208ENST00000469529 CBLN1P23435 193 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 CD81P60033 236 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 SRSF3P84103 164 aaKnown RBP9.68□□□□□ -0.86
TRAF4-208ENST00000469529 HAGHQ16775 308 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 KHDC1LQ5JSQ8 128 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 TOR2AQ5JU69 321 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms