RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 CLUHP3Q96NS8 147 aa13.24□□□□□ -0.29
PHGDH-204ENST00000469443 SCRT1Q9BWW7 348 aa13.24□□□□□ -0.29
PHGDH-204ENST00000469443 SLC25A39Q9BZJ4 359 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-204ENST00000469443 HIGD1AQ9Y241 93 aa13.24□□□□□ -0.29
PHGDH-204ENST00000469443 LSM5Q9Y4Y9 91 aaKnown RBP13.24□□□□□ -0.29
PHGDH-204ENST00000469443 HYPMO75409 117 aa13.23□□□□□ -0.29
PHGDH-204ENST00000469443 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.23□□□□□ -0.29
PHGDH-204ENST00000469443 SHANK2-AS3Q9BTD1 123 aa13.23□□□□□ -0.29
PHGDH-204ENST00000469443 GGACTQ9BVM4 153 aa13.23□□□□□ -0.29
PHGDH-204ENST00000469443 RPRMQ9NS64 109 aa13.23□□□□□ -0.29
PHGDH-204ENST00000469443 PTTG2Q9NZH5 202 aa13.23□□□□□ -0.29
PHGDH-204ENST00000469443 DEDDO75618 318 aa13.22□□□□□ -0.29
PHGDH-204ENST00000469443 IGKV3-20P01619 116 aa13.22□□□□□ -0.29
PHGDH-204ENST00000469443 OR5G3P0C626 314 aa13.22□□□□□ -0.29
PHGDH-204ENST00000469443 SLC38A11Q08AI6 406 aa13.22□□□□□ -0.29
PHGDH-204ENST00000469443 EBLN2Q6P2I7 272 aa13.22□□□□□ -0.29
PHGDH-204ENST00000469443 S100A7AQ86SG5 101 aa13.22□□□□□ -0.29
PHGDH-204ENST00000469443 OR4B1Q8NGF8 309 aa13.22□□□□□ -0.29
PHGDH-204ENST00000469443 HRH4Q9H3N8 390 aa13.22□□□□□ -0.29
PHGDH-204ENST00000469443 A0A0J9YX75 114 aa13.21□□□□□ -0.29
PHGDH-204ENST00000469443 F6UB75 175 aa13.21□□□□□ -0.29
PHGDH-204ENST00000469443 UPK1BO75841 260 aa13.21□□□□□ -0.29
PHGDH-204ENST00000469443 LY6G6CO95867 125 aa13.21□□□□□ -0.29
PHGDH-204ENST00000469443 RPL7P18124 248 aaKnown RBP13.21□□□□□ -0.29
PHGDH-204ENST00000469443 BCAP31P51572 246 aa13.21□□□□□ -0.29
PHGDH-204ENST00000469443 ZNF546Q86UE3 836 aa13.21□□□□□ -0.29
PHGDH-204ENST00000469443 C20orf173Q96LM9 149 aa13.21□□□□□ -0.29
PHGDH-204ENST00000469443 UHRF2Q96PU4 802 aa13.21□□□□□ -0.29
PHGDH-204ENST00000469443 ARL6Q9H0F7 186 aa13.21□□□□□ -0.29
PHGDH-204ENST00000469443 C11orf1Q9H5F2 150 aa13.21□□□□□ -0.29
PHGDH-204ENST00000469443 ELOA3CA0A087WX78 387 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-204ENST00000469443 GOSR2O14653 212 aa13.2□□□□□ -0.3
PHGDH-204ENST00000469443 AGPAT2O15120 278 aa13.2□□□□□ -0.3
PHGDH-204ENST00000469443 PVALBP20472 110 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-204ENST00000469443 FXYD7P58549 80 aa13.2□□□□□ -0.3
PHGDH-204ENST00000469443 PXDC1Q5TGL8 231 aa13.2□□□□□ -0.3
PHGDH-204ENST00000469443 FAM78BQ5VT40 261 aa13.2□□□□□ -0.3
PHGDH-204ENST00000469443 ENKURQ8TC29 256 aa13.2□□□□□ -0.3
PHGDH-204ENST00000469443 CAV2P51636 162 aa13.19□□□□□ -0.3
PHGDH-204ENST00000469443 PSG9Q00887 426 aa13.19□□□□□ -0.3
PHGDH-204ENST00000469443 FGL1Q08830 312 aa13.19□□□□□ -0.3
PHGDH-204ENST00000469443 IL15RAQ13261 267 aa13.19□□□□□ -0.3
PHGDH-204ENST00000469443 PATE2Q6UY27 113 aa13.19□□□□□ -0.3
PHGDH-204ENST00000469443 ZNF705AQ6ZN79 300 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-204ENST00000469443 ZNF709Q8N972 641 aa13.19□□□□□ -0.3
PHGDH-204ENST00000469443 SLC35B3Q9H1N7 401 aa13.19□□□□□ -0.3
PHGDH-204ENST00000469443 ARV1Q9H2C2 271 aa13.19□□□□□ -0.3
PHGDH-204ENST00000469443 RNF24Q9Y225 148 aa13.19□□□□□ -0.3
PHGDH-204ENST00000469443 FAM24AA6NFZ4 105 aa13.18□□□□□ -0.3
PHGDH-204ENST00000469443 A8MTW9 85 aa13.18□□□□□ -0.3
PHGDH-204ENST00000469443 C11orf94C9JXX5 98 aa13.18□□□□□ -0.3
PHGDH-204ENST00000469443 CST7O76096 145 aa13.18□□□□□ -0.3
PHGDH-204ENST00000469443 S100A10P60903 97 aa13.18□□□□□ -0.3
PHGDH-204ENST00000469443 RAB32Q13637 225 aa13.18□□□□□ -0.3
PHGDH-204ENST00000469443 C2CD4CQ8TF44 421 aa13.18□□□□□ -0.3
PHGDH-204ENST00000469443 NEU1Q99519 415 aa13.18□□□□□ -0.3
PHGDH-204ENST00000469443 MGST2Q99735 147 aa13.18□□□□□ -0.3
PHGDH-204ENST00000469443 GPN1Q9HCN4 374 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-204ENST00000469443 TRAV8-2A0A0B4J237 113 aa13.17□□□□□ -0.3
PHGDH-204ENST00000469443 ZNF705FA8MVS1 300 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-204ENST00000469443 ZNF705DP0CH99 300 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-204ENST00000469443 ZNF705BP0CI00 300 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-204ENST00000469443 HLA-DMBP28068 263 aa13.17□□□□□ -0.3
PHGDH-204ENST00000469443 IFITM3Q01628 133 aa13.17□□□□□ -0.3
PHGDH-204ENST00000469443 LYRM2Q9NU23 88 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-204ENST00000469443 A0A087X0K7 114 aa13.16□□□□□ -0.3
PHGDH-204ENST00000469443 SMIM9A6NGZ8 99 aa13.16□□□□□ -0.3
PHGDH-204ENST00000469443 IGFL4Q6B9Z1 124 aa13.16□□□□□ -0.3
PHGDH-204ENST00000469443 RNF182Q8N6D2 247 aa13.16□□□□□ -0.3
PHGDH-204ENST00000469443 UQCC1Q9NVA1 299 aa13.16□□□□□ -0.3
PHGDH-204ENST00000469443 CELA1Q9UNI1 258 aa13.16□□□□□ -0.3
PHGDH-204ENST00000469443 IGHV3OR16-12A0A075B7B8 117 aa13.15□□□□□ -0.3
PHGDH-204ENST00000469443 MRPS12O15235 138 aaKnown RBP13.15□□□□□ -0.3
PHGDH-204ENST00000469443 COX7A2P2O60397 106 aa13.15□□□□□ -0.3
PHGDH-204ENST00000469443 DUSP14O95147 198 aaKnown RBP13.15□□□□□ -0.3
PHGDH-204ENST00000469443 CAMLGP49069 296 aa13.15□□□□□ -0.3
PHGDH-204ENST00000469443 SULT1A1P50225 295 aa13.15□□□□□ -0.3
PHGDH-204ENST00000469443 TCTAP57738 103 aa13.15□□□□□ -0.3
PHGDH-204ENST00000469443 RAB31Q13636 194 aa13.15□□□□□ -0.3
PHGDH-204ENST00000469443 Q6ZTC4 211 aa13.15□□□□□ -0.3
PHGDH-204ENST00000469443 LINC00305Q7Z4B0 112 aa13.15□□□□□ -0.3
PHGDH-204ENST00000469443 TMEM252Q8N6L7 170 aa13.15□□□□□ -0.3
PHGDH-204ENST00000469443 WDR83OSQ9Y284 106 aa13.15□□□□□ -0.3
PHGDH-204ENST00000469443 TRAV10A0A0B4J240 114 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 IGSF23A1L1A6 192 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 PRAF2O60831 178 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 S100A11P31949 105 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 CNN1P51911 297 aaKnown RBP13.14□□□□□ -0.31
PHGDH-204ENST00000469443 VWC2Q2TAL6 325 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 LGALS9CQ6DKI2 356 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 AMTNQ6UX39 209 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 NRARPQ7Z6K4 114 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 STX12Q86Y82 276 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 ZNF738Q8NE65 137 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 LRRC20Q8TCA0 184 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 TMEM37Q8WXS4 190 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 GOLT1BQ9Y3E0 138 aa13.14□□□□□ -0.31
PHGDH-204ENST00000469443 INMT-MINDY4F8WBC2 141 aa13.13□□□□□ -0.31
PHGDH-204ENST00000469443 CXCL3P19876 107 aa13.13□□□□□ -0.31
PHGDH-204ENST00000469443 HBG1P69891 147 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms