RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 DSCAML1Q8TD84 2053 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 EXOC1LA0A1B0GW35 172 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 A8MUN3 132 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 COX7A2LO14548 114 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 RPSAP08865 295 aaKnown RBP2.1□□□□□ -2.07
LSM5-209ENST00000468872 FAM228BP0C875 321 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 KCNE1P15382 129 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 RPS20P60866 119 aaKnown RBP2.1□□□□□ -2.07
LSM5-209ENST00000468872 SNRPD2P62316 118 aaKnown RBP2.1□□□□□ -2.07
LSM5-209ENST00000468872 SS18Q15532 418 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 LGALS9BQ3B8N2 356 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 TEX36Q5VZQ5 186 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 LGALS9CQ6DKI2 356 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 C5orf46Q6UWT4 87 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 TMED4Q7Z7H5 227 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 GPHB5Q86YW7 130 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 OR8B12Q8NGG6 310 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 CPNE2Q96FN4 548 aaPredicted RBP2.1□□□□□ -2.07
LSM5-209ENST00000468872 ERMAPQ96PL5 475 aaPredicted RBP2.1□□□□□ -2.07
LSM5-209ENST00000468872 TSPAN32Q96QS1 320 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 PHB2Q99623 299 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 CXorf21Q9HAI6 301 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 C14orf105Q9NVL8 296 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 FKBP14Q9NWM8 211 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 ZNF532Q9HCE3 1301 aa2.1□□□□□ -2.07
LSM5-209ENST00000468872 MUC4Q99102 2169 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 ZNF638Q14966 1978 aaKnown RBP2.09□□□□□ -2.07
LSM5-209ENST00000468872 TRAV26-2A0A0B4J265 109 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 hADV38S2A0JD32 116 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 KNCNA6PVL3 124 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 CCL16O15467 120 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 TNFSF15O95150 251 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 HLA-DQB2P05538 268 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 GZMBP10144 247 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 HES1Q14469 280 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 POU6F1Q14863 301 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 KCNJ8Q15842 424 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 TNFAIP8L3Q5GJ75 292 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 AMTNQ6UX39 209 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 C2orf91Q6ZV80 131 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 C3orf56Q8N813 242 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 Q8NDZ9 215 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 OR51A2Q8NGJ7 313 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 FAM172AQ8WUF8 416 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 BORCS7Q96B45 105 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 TRABDQ9H4I3 376 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 ROS1P08922 2347 aa2.09□□□□□ -2.07
LSM5-209ENST00000468872 DNAH9Q9NYC9 4486 aa2.09□□□□□ -2.08
LSM5-209ENST00000468872 MYCBP2O75592 4640 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 HSPG2P98160 4391 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 USF3Q68DE3 2245 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 IGHV3-15A0A0B4J1V0 119 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 MUC21A0A0G2JKD1 596 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 IGHV1-69-2A0A0G2JMI3 117 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 MUC21A0A140T8X8 626 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 A0A1B0GV50 99 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 LOC105371267A0A1B0GV96 52 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 MDFIC2A0A1B0GVS7 189 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 GRIFINA4D1Z8 144 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 OR11H12B2RN74 326 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 H3BPC8 53 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 H3BQV1 296 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 UBFD1O14562 309 aaKnown RBP2.08□□□□□ -2.08
LSM5-209ENST00000468872 PDE6DO43924 150 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 P0DMU3 169 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 FAM231AP0DMU4 169 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 FAM231CP0DMU5 169 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 PSMD8P48556 350 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 ZNF140P52738 457 aaPredicted RBP2.08□□□□□ -2.08
LSM5-209ENST00000468872 DEFA1P59665 94 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 C9orf64Q5T6V5 341 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 C20orf196Q8IYI0 205 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 C12orf45Q8N5I9 185 aaPredicted RBP2.08□□□□□ -2.08
LSM5-209ENST00000468872 ZNF283Q8N7M2 679 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 OR11H2Q8NH07 326 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 CNBD2Q96M20 576 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 CMSS1Q9BQ75 279 aaKnown RBP2.08□□□□□ -2.08
LSM5-209ENST00000468872 BOLA2Q9H3K6 86 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 NMNAT1Q9HAN9 279 aaPredicted RBP2.08□□□□□ -2.08
LSM5-209ENST00000468872 ENY2Q9NPA8 101 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 ANGPT4Q9Y264 503 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 KLK5Q9Y337 293 aaPredicted RBP2.08□□□□□ -2.08
LSM5-209ENST00000468872 FAM32AQ9Y421 112 aaKnown RBP2.08□□□□□ -2.08
LSM5-209ENST00000468872 V9GYQ6 96 aa2.08□□□□□ -2.08
LSM5-209ENST00000468872 NEBP20929 6669 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 C9JCJ5 164 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 IGHV1-69P01742 117 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 HLA-DRB1P01911 266 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 C1QBP02746 253 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 HOXC5Q00444 222 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 FABP9Q0Z7S8 132 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 DEFB109BQ30KR1 87 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.07□□□□□ -2.08
LSM5-209ENST00000468872 TAC4Q86UU9 113 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 SLC22A24Q8N4F4 322 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 SMIM20Q8N5G0 67 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 PACRGLQ8N7B6 248 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 DAND5Q8N907 189 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 CNEP1R1Q8N9A8 125 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 RAB2BQ8WUD1 216 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms