RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 PXDC1Q5TGL8 231 aa9.5□□□□□ -0.89
CLRN1-204ENST00000468836 SPATA31B1PQ5VZV4 182 aa9.5□□□□□ -0.89
CLRN1-204ENST00000468836 NRARPQ7Z6K4 114 aa9.5□□□□□ -0.89
CLRN1-204ENST00000468836 OR4B1Q8NGF8 309 aa9.5□□□□□ -0.89
CLRN1-204ENST00000468836 LRRC20Q8TCA0 184 aa9.5□□□□□ -0.89
CLRN1-204ENST00000468836 SHANK2-AS3Q9BTD1 123 aa9.5□□□□□ -0.89
CLRN1-204ENST00000468836 C11orf68Q9H3H3 251 aaKnown RBP9.5□□□□□ -0.89
CLRN1-204ENST00000468836 UQCC1Q9NVA1 299 aa9.5□□□□□ -0.89
CLRN1-204ENST00000468836 CLEC5AQ9NY25 188 aa9.5□□□□□ -0.89
CLRN1-204ENST00000468836 KLK5Q9Y337 293 aaPredicted RBP9.5□□□□□ -0.89
CLRN1-204ENST00000468836 HLA-DRB4X5D2U9 266 aa9.5□□□□□ -0.89
CLRN1-204ENST00000468836 AGPAT2O15120 278 aa9.49□□□□□ -0.89
CLRN1-204ENST00000468836 CAMLGP49069 296 aa9.49□□□□□ -0.89
CLRN1-204ENST00000468836 SULT1A1P50225 295 aa9.49□□□□□ -0.89
CLRN1-204ENST00000468836 BAXQ07812 192 aa9.49□□□□□ -0.89
CLRN1-204ENST00000468836 ARL16Q0P5N6 197 aa9.49□□□□□ -0.89
CLRN1-204ENST00000468836 Q6ZRG5 221 aa9.49□□□□□ -0.89
CLRN1-204ENST00000468836 C11orf45Q8TAV5 145 aa9.49□□□□□ -0.89
CLRN1-204ENST00000468836 UHRF2Q96PU4 802 aa9.49□□□□□ -0.89
CLRN1-204ENST00000468836 ARV1Q9H2C2 271 aa9.49□□□□□ -0.89
CLRN1-204ENST00000468836 SAV1Q9H4B6 383 aaPredicted RBP9.49□□□□□ -0.89
CLRN1-204ENST00000468836 LYRM2Q9NU23 88 aaPredicted RBP9.49□□□□□ -0.89
CLRN1-204ENST00000468836 EPPK1P58107 5090 aaKnown RBP9.48□□□□□ -0.89
CLRN1-204ENST00000468836 UBE2L5PA0A1B0GUS4 154 aa9.48□□□□□ -0.89
CLRN1-204ENST00000468836 SOCS3O14543 225 aa9.48□□□□□ -0.89
CLRN1-204ENST00000468836 DEFB4AO15263 64 aa9.48□□□□□ -0.89
CLRN1-204ENST00000468836 SSNA1O43805 119 aa9.48□□□□□ -0.89
CLRN1-204ENST00000468836 MIFP14174 115 aa9.48□□□□□ -0.89
CLRN1-204ENST00000468836 S100A11P31949 105 aa9.48□□□□□ -0.89
CLRN1-204ENST00000468836 PLP1P60201 277 aa9.48□□□□□ -0.89
CLRN1-204ENST00000468836 CYCSP99999 105 aaKnown RBP9.48□□□□□ -0.89
CLRN1-204ENST00000468836 IFITM3Q01628 133 aa9.48□□□□□ -0.89
CLRN1-204ENST00000468836 EWSR1Q01844 656 aaKnown RBP eCLIP9.48□□□□□ -0.89
CLRN1-204ENST00000468836 LRRC37A5PQ49AS3 106 aa9.48□□□□□ -0.89
CLRN1-204ENST00000468836 XCL2Q9UBD3 114 aa9.48□□□□□ -0.89
CLRN1-204ENST00000468836 ELOA3CA0A087WX78 387 aaPredicted RBP9.47□□□□□ -0.89
CLRN1-204ENST00000468836 IGHV4-28A0A0C4DH34 117 aa9.47□□□□□ -0.89
CLRN1-204ENST00000468836 SIX6O95475 246 aa9.47□□□□□ -0.89
CLRN1-204ENST00000468836 CEMP1Q6PRD7 247 aaPredicted RBP9.47□□□□□ -0.89
CLRN1-204ENST00000468836 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.47□□□□□ -0.89
CLRN1-204ENST00000468836 LINC00305Q7Z4B0 112 aa9.47□□□□□ -0.89
CLRN1-204ENST00000468836 TMEM252Q8N6L7 170 aa9.47□□□□□ -0.89
CLRN1-204ENST00000468836 ZNF738Q8NE65 137 aa9.47□□□□□ -0.89
CLRN1-204ENST00000468836 MGST2Q99735 147 aa9.47□□□□□ -0.89
CLRN1-204ENST00000468836 SLC25A31Q9H0C2 315 aa9.47□□□□□ -0.89
CLRN1-204ENST00000468836 IGHV3OR16-12A0A075B7B8 117 aa9.46□□□□□ -0.9
CLRN1-204ENST00000468836 PET100P0DJ07 73 aa9.46□□□□□ -0.9
CLRN1-204ENST00000468836 FXYD7P58549 80 aa9.46□□□□□ -0.9
CLRN1-204ENST00000468836 DEFB1P60022 68 aa9.46□□□□□ -0.9
CLRN1-204ENST00000468836 NANOS2P60321 138 aaKnown RBP9.46□□□□□ -0.9
CLRN1-204ENST00000468836 PSG9Q00887 426 aa9.46□□□□□ -0.9
CLRN1-204ENST00000468836 ATP6V1FQ16864 119 aa9.46□□□□□ -0.9
CLRN1-204ENST00000468836 GDF5OSQ5U4N7 250 aa9.46□□□□□ -0.9
CLRN1-204ENST00000468836 FAM78BQ5VT40 261 aa9.46□□□□□ -0.9
CLRN1-204ENST00000468836 C10orf113Q5VZT2 155 aa9.46□□□□□ -0.9
CLRN1-204ENST00000468836 OR1L4Q8NGR5 311 aa9.46□□□□□ -0.9
CLRN1-204ENST00000468836 PHLDA1Q8WV24 401 aaPredicted RBP9.46□□□□□ -0.9
CLRN1-204ENST00000468836 NMES1Q9C002 83 aa9.46□□□□□ -0.9
CLRN1-204ENST00000468836 A0A0J9YX75 114 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 IGSF23A1L1A6 192 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 ZNF705EA8MWA4 302 aaPredicted RBP9.45□□□□□ -0.9
CLRN1-204ENST00000468836 E5RGE8 158 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 F6UB75 175 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 DUSP14O95147 198 aaKnown RBP9.45□□□□□ -0.9
CLRN1-204ENST00000468836 GIG44P09565 113 aaPredicted RBP9.45□□□□□ -0.9
CLRN1-204ENST00000468836 FGF7P21781 194 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 BPIFA4PQ86YQ2 179 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 Q8NAQ8 132 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 PFDN5Q99471 154 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 MARVELD1Q9BSK0 173 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 C11orf1Q9H5F2 150 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 PPP1R14DQ9NXH3 145 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 WDR83OSQ9Y284 106 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 GOLT1BQ9Y3E0 138 aa9.45□□□□□ -0.9
CLRN1-204ENST00000468836 A0A087X0K7 114 aa9.44□□□□□ -0.9
CLRN1-204ENST00000468836 B2MP61769 119 aa9.44□□□□□ -0.9
CLRN1-204ENST00000468836 IL15RAQ13261 267 aa9.44□□□□□ -0.9
CLRN1-204ENST00000468836 MIC13Q5XKP0 118 aa9.44□□□□□ -0.9
CLRN1-204ENST00000468836 LCN15Q6UWW0 184 aa9.44□□□□□ -0.9
CLRN1-204ENST00000468836 RNF182Q8N6D2 247 aa9.44□□□□□ -0.9
CLRN1-204ENST00000468836 C20orf173Q96LM9 149 aa9.44□□□□□ -0.9
CLRN1-204ENST00000468836 CLUHP3Q96NS8 147 aa9.44□□□□□ -0.9
CLRN1-204ENST00000468836 TMEM208Q9BTX3 173 aa9.44□□□□□ -0.9
CLRN1-204ENST00000468836 X6R8D5 127 aa9.44□□□□□ -0.9
CLRN1-204ENST00000468836 BIRC6Q9NR09 4857 aa9.44□□□□□ -0.9
CLRN1-204ENST00000468836 MPDU1O75352 247 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 AMBPP02760 352 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 CXCL2P19875 107 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 RHOBP62745 196 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 VWC2Q2TAL6 325 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 IGFL4Q6B9Z1 124 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 PATE2Q6UY27 113 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 CSNK1G2-AS1Q8NCQ2 148 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 SLC50A1Q9BRV3 221 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 SLC35B3Q9H1N7 401 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 DNAJC4Q9NNZ3 241 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 KCNIP2Q9NS61 270 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 SLC39A9Q9NUM3 307 aa9.43□□□□□ -0.9
CLRN1-204ENST00000468836 STARD9Q9P2P6 4700 aa9.42□□□□□ -0.9
CLRN1-204ENST00000468836 C11orf94C9JXX5 98 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms