RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 UNQ5815/PRO19632Q6UWF5 114 aa5.95□□□□□ -1.46
COL6A3-208ENST00000468792 BAGE2Q86Y30 109 aa5.95□□□□□ -1.46
COL6A3-208ENST00000468792 FAM223AQ8IWN6 122 aa5.95□□□□□ -1.46
COL6A3-208ENST00000468792 LINC01356Q8N9X3 169 aa5.95□□□□□ -1.46
COL6A3-208ENST00000468792 MBD6Q96DN6 1003 aa5.95□□□□□ -1.46
COL6A3-208ENST00000468792 HSPB9Q9BQS6 159 aa5.95□□□□□ -1.46
COL6A3-208ENST00000468792 GNB1LQ9BYB4 327 aa5.95□□□□□ -1.46
COL6A3-208ENST00000468792 Q9H3A6 140 aa5.95□□□□□ -1.46
COL6A3-208ENST00000468792 GSX1Q9H4S2 264 aaPredicted RBP5.95□□□□□ -1.46
COL6A3-208ENST00000468792 C7orf69Q9H7B7 122 aa5.95□□□□□ -1.46
COL6A3-208ENST00000468792 ZNF586Q9NXT0 402 aa5.95□□□□□ -1.46
COL6A3-208ENST00000468792 FBXL7Q9UJT9 491 aa5.95□□□□□ -1.46
COL6A3-208ENST00000468792 BMPR1BO00238 502 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 ATP6V0E1O15342 81 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 OR2J3O76001 311 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 IGHG2P01859 326 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 MEOX2P50222 304 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 UBE2G1P62253 170 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 PSG9Q00887 426 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 USF2Q15853 346 aaPredicted RBP5.94□□□□□ -1.46
COL6A3-208ENST00000468792 CLEC12BQ2HXU8 276 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 Q56UQ5 140 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 C1orf194Q5T5A4 169 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 WDR73Q6P4I2 378 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 PRSS57Q6UWY2 283 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 SIGLEC15Q6ZMC9 328 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 COX8CQ7Z4L0 72 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 TMEM183AQ8IXX5 376 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 TMEM75Q8N9X5 138 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 OR5T1Q8NG75 326 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 WIPF2Q8TF74 440 aaPredicted RBP5.94□□□□□ -1.46
COL6A3-208ENST00000468792 EEF1AKMT3Q96AZ1 226 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 GRAMD2BQ96HH9 432 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 ZNF414Q96IQ9 312 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 PRSS22Q9GZN4 317 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 AURKAIP1Q9NWT8 199 aaPredicted RBP5.94□□□□□ -1.46
COL6A3-208ENST00000468792 RABAC1Q9UI14 185 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 ZFP30Q9Y2G7 519 aa5.94□□□□□ -1.46
COL6A3-208ENST00000468792 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.93□□□□□ -1.46
COL6A3-208ENST00000468792 A0A087X0K7 114 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 TRAV40A0A0B4J280 105 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 C19orf71A6NCJ1 209 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 NPIPB6E9PJ23 425 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 K7EQM0 130 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 ADMP35318 185 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 AKR1D1P51857 326 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 NDUFA6P56556 154 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 S100A12P80511 92 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 RHOGP84095 191 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 RELQ04864 619 aaPredicted RBP5.93□□□□□ -1.46
COL6A3-208ENST00000468792 OR5I1Q13606 314 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 C15orf32Q32M92 178 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 FAM209BQ5JX69 171 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 C9orf139Q6ZV77 190 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 ATP5L2Q7Z4Y8 100 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 HIST3H2BBQ8N257 126 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 CMTM2Q8TAZ6 248 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 BLNKQ8WV28 456 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 USMG5Q96IX5 58 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 GFRA4Q9GZZ7 299 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 HIF1ANQ9NWT6 349 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 TRAPPC1Q9Y5R8 145 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 SOX21Q9Y651 276 aaPredicted RBP5.93□□□□□ -1.46
COL6A3-208ENST00000468792 SVEP1Q4LDE5 3571 aa5.93□□□□□ -1.46
COL6A3-208ENST00000468792 UTP20O75691 2785 aaKnown RBP5.92□□□□□ -1.46
COL6A3-208ENST00000468792 MAP1AP78559 2803 aaPredicted RBP5.92□□□□□ -1.46
COL6A3-208ENST00000468792 TRAV41A0A0B4J266 112 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 TMEM89A2RUT3 159 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 IZUMO1RA6ND01 250 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 IFITM10A6NMD0 228 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 SLC17A3O00476 420 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 GATCO43716 136 aaKnown RBP5.92□□□□□ -1.46
COL6A3-208ENST00000468792 IGLV2-11P01706 119 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 PRB1P04280 392 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 CLEC3BP05452 202 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 IGHV4-38-2P0DP08 117 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 S100A2P29034 98 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 PPIFP30405 207 aaKnown RBP5.92□□□□□ -1.46
COL6A3-208ENST00000468792 FOXA3P55318 350 aaPredicted RBP5.92□□□□□ -1.46
COL6A3-208ENST00000468792 TNP2Q05952 138 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 ATP5G2Q06055 141 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 LEMD1Q68G75 181 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 C16orf54Q6UWD8 224 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 NUDT10Q8NFP7 164 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 OR4B1Q8NGF8 309 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 TSKUQ8WUA8 353 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 NUDT11Q96G61 164 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 LINC00479Q96M42 142 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 PACRGQ96M98 296 aaPredicted RBP5.92□□□□□ -1.46
COL6A3-208ENST00000468792 C12orf57Q99622 126 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 RNASE7Q9H1E1 156 aaKnown RBP5.92□□□□□ -1.46
COL6A3-208ENST00000468792 CLEC5AQ9NY25 188 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 U3KQE9 123 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 FBN2P35556 2912 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 CENPEQ02224 2701 aa5.92□□□□□ -1.46
COL6A3-208ENST00000468792 FAM208BQ5VWN6 2430 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 OR2T8A6NH00 312 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 ZNF705GA8MUZ8 300 aaPredicted RBP5.91□□□□□ -1.46
COL6A3-208ENST00000468792 A8MWL6 223 aa5.91□□□□□ -1.46
COL6A3-208ENST00000468792 DIRC3C9JPN6 131 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms