RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 IGFL4Q6B9Z1 124 aa9.66□□□□□ -0.86
C9orf3-212ENST00000468164 C20orf173Q96LM9 149 aa9.66□□□□□ -0.86
C9orf3-212ENST00000468164 SCRT1Q9BWW7 348 aa9.66□□□□□ -0.86
C9orf3-212ENST00000468164 GPN1Q9HCN4 374 aaPredicted RBP9.66□□□□□ -0.86
C9orf3-212ENST00000468164 GSKIPQ9P0R6 139 aa9.66□□□□□ -0.86
C9orf3-212ENST00000468164 FAM25EA8MYX2 175 aa9.65□□□□□ -0.86
C9orf3-212ENST00000468164 CCNKO75909 580 aa9.65□□□□□ -0.86
C9orf3-212ENST00000468164 OR5G3P0C626 314 aa9.65□□□□□ -0.86
C9orf3-212ENST00000468164 MEOX2P50222 304 aa9.65□□□□□ -0.86
C9orf3-212ENST00000468164 PSG9Q00887 426 aa9.65□□□□□ -0.86
C9orf3-212ENST00000468164 ZNF705AQ6ZN79 300 aaPredicted RBP9.65□□□□□ -0.86
C9orf3-212ENST00000468164 CYP2G1PQ6ZSU1 146 aa9.65□□□□□ -0.86
C9orf3-212ENST00000468164 C12orf45Q8N5I9 185 aaPredicted RBP9.65□□□□□ -0.86
C9orf3-212ENST00000468164 ZNF709Q8N972 641 aa9.65□□□□□ -0.86
C9orf3-212ENST00000468164 SEC22CQ9BRL7 303 aa9.65□□□□□ -0.86
C9orf3-212ENST00000468164 A0A0J9YX75 114 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 C5orf51A6NDU8 294 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 METTL15P1P0C7V9 234 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 SPART-AS1P0CW21 52 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 HTN3P15516 51 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 S100A7P31151 101 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 RAP2BP61225 183 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 ID3Q02535 119 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 SAMD13Q5VXD3 122 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 OR4D5Q8NGN0 318 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 TMEM208Q9BTX3 173 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 GOLT1BQ9Y3E0 138 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 RFNGQ9Y644 331 aa9.64□□□□□ -0.87
C9orf3-212ENST00000468164 ZNF705FA8MVS1 300 aaPredicted RBP9.63□□□□□ -0.87
C9orf3-212ENST00000468164 LINC00869P0C866 280 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 ZNF705DP0CH99 300 aaPredicted RBP9.63□□□□□ -0.87
C9orf3-212ENST00000468164 ZNF705BP0CI00 300 aaPredicted RBP9.63□□□□□ -0.87
C9orf3-212ENST00000468164 PAX9P55771 341 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 IFITM3Q01628 133 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 SPATA31B1PQ5VZV4 182 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 TMEM144Q7Z5S9 345 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 RNF182Q8N6D2 247 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 ZBTB8BQ8NAP8 495 aaPredicted RBP9.63□□□□□ -0.87
C9orf3-212ENST00000468164 UHRF2Q96PU4 802 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 NDUFAF3Q9BU61 184 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 RNF126Q9BV68 326 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 SLC25A39Q9BZJ4 359 aaPredicted RBP9.63□□□□□ -0.87
C9orf3-212ENST00000468164 PLA2G2EQ9NZK7 142 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 MGAT4CQ9UBM8 478 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 SLC45A2Q9UMX9 530 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 HIGD1AQ9Y241 93 aa9.63□□□□□ -0.87
C9orf3-212ENST00000468164 TMEM189A5PLL7 270 aa9.62□□□□□ -0.87
C9orf3-212ENST00000468164 SMIM9A6NGZ8 99 aa9.62□□□□□ -0.87
C9orf3-212ENST00000468164 CCSO14618 274 aa9.62□□□□□ -0.87
C9orf3-212ENST00000468164 HYPMO75409 117 aa9.62□□□□□ -0.87
C9orf3-212ENST00000468164 HBE1P02100 147 aa9.62□□□□□ -0.87
C9orf3-212ENST00000468164 PRB4P10163 310 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-212ENST00000468164 FAM222AQ5U5X8 452 aa9.62□□□□□ -0.87
C9orf3-212ENST00000468164 NRARPQ7Z6K4 114 aa9.62□□□□□ -0.87
C9orf3-212ENST00000468164 ZNF738Q8NE65 137 aa9.62□□□□□ -0.87
C9orf3-212ENST00000468164 SMIM8Q96KF7 97 aa9.62□□□□□ -0.87
C9orf3-212ENST00000468164 GPR82Q96P67 336 aa9.62□□□□□ -0.87
C9orf3-212ENST00000468164 NEU1Q99519 415 aa9.62□□□□□ -0.87
C9orf3-212ENST00000468164 ARL6Q9H0F7 186 aa9.62□□□□□ -0.87
C9orf3-212ENST00000468164 LOC102723971A0A1B0GUV8 181 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 PMS2P5A8MQ11 134 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 INMT-MINDY4F8WBC2 141 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 H3BRN7 92 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 L7N2F9 121 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 PRAF2O60831 178 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 AMBPP02760 352 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 CNN1P51911 297 aaKnown RBP9.61□□□□□ -0.87
C9orf3-212ENST00000468164 VAMP2P63027 116 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 SLC38A11Q08AI6 406 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 SPINK13Q1W4C9 94 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 RRN3P1Q2M238 152 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 C1orf158Q8N1D5 194 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 OR10P1Q8NGE3 313 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 LRRC20Q8TCA0 184 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 C17orf77Q96MU5 243 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 CLUHP3Q96NS8 147 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 NIPSNAP3BQ9BS92 247 aa9.61□□□□□ -0.87
C9orf3-212ENST00000468164 TRAV8-2A0A0B4J237 113 aa9.6□□□□□ -0.87
C9orf3-212ENST00000468164 M0R2Z0 102 aa9.6□□□□□ -0.87
C9orf3-212ENST00000468164 SNRPCP09234 159 aaKnown RBP9.6□□□□□ -0.87
C9orf3-212ENST00000468164 RPL7P18124 248 aaKnown RBP9.6□□□□□ -0.87
C9orf3-212ENST00000468164 SELENOTP62341 195 aa9.6□□□□□ -0.87
C9orf3-212ENST00000468164 DLK1P80370 383 aa9.6□□□□□ -0.87
C9orf3-212ENST00000468164 TMEM14EPQ6UXP3 125 aa9.6□□□□□ -0.87
C9orf3-212ENST00000468164 C2orf50Q96LR7 162 aa9.6□□□□□ -0.87
C9orf3-212ENST00000468164 SHANK2-AS3Q9BTD1 123 aa9.6□□□□□ -0.87
C9orf3-212ENST00000468164 NPVFQ9HCQ7 196 aa9.6□□□□□ -0.87
C9orf3-212ENST00000468164 PPP1R14DQ9NXH3 145 aa9.6□□□□□ -0.87
C9orf3-212ENST00000468164 DKK2Q9UBU2 259 aa9.6□□□□□ -0.87
C9orf3-212ENST00000468164 RCL1Q9Y2P8 373 aaKnown RBP9.6□□□□□ -0.87
C9orf3-212ENST00000468164 LSM5Q9Y4Y9 91 aaKnown RBP9.6□□□□□ -0.87
C9orf3-212ENST00000468164 YTHDF2Q9Y5A9 579 aaKnown RBP9.6□□□□□ -0.87
C9orf3-212ENST00000468164 HECTD4Q9Y4D8 3996 aa9.6□□□□□ -0.87
C9orf3-212ENST00000468164 NACAE9PAV3 2078 aa9.59□□□□□ -0.87
C9orf3-212ENST00000468164 GOSR2O14653 212 aa9.59□□□□□ -0.87
C9orf3-212ENST00000468164 DUSP14O95147 198 aaKnown RBP9.59□□□□□ -0.87
C9orf3-212ENST00000468164 MBPP02686 304 aaPredicted RBP9.59□□□□□ -0.87
C9orf3-212ENST00000468164 PRM2P04554 102 aa9.59□□□□□ -0.87
C9orf3-212ENST00000468164 P0DMU3 169 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms